RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 FRMD3A2A2Y4 597 aa25.02■■□□□ 1.6
LDB1-201ENST00000361198 GCOM1H8Y6P7 765 aaPredicted RBP25.02■■□□□ 1.6
LDB1-201ENST00000361198 KRT18P05783 430 aaKnown RBP25.02■■□□□ 1.6
LDB1-201ENST00000361198 POLR2MP0CAP2 368 aa25.02■■□□□ 1.6
LDB1-201ENST00000361198 MAP3K10Q02779 954 aa25.02■■□□□ 1.6
LDB1-201ENST00000361198 CYP4A11Q02928 519 aa25.02■■□□□ 1.6
LDB1-201ENST00000361198 PITPNM2Q9BZ72 1349 aa25.02■■□□□ 1.6
LDB1-201ENST00000361198 FKBP3Q00688 224 aaKnown RBP25.02■■□□□ 1.6
LDB1-201ENST00000361198 SLC30A10Q6XR72 485 aa25.02■■□□□ 1.6
LDB1-201ENST00000361198 NELFCDQ8IXH7 590 aa25.02■■□□□ 1.6
LDB1-201ENST00000361198 WDR18Q9BV38 432 aa25.02■■□□□ 1.6
LDB1-201ENST00000361198 SH2D4AQ9H788 454 aa25.02■■□□□ 1.6
LDB1-201ENST00000361198 SIK3Q9Y2K2 1263 aa25.02■■□□□ 1.6
LDB1-201ENST00000361198 EML1O00423 815 aa25.01■■□□□ 1.59
LDB1-201ENST00000361198 TRAF5O00463 557 aa25.01■■□□□ 1.59
LDB1-201ENST00000361198 PLA2G6O60733 806 aa25.01■■□□□ 1.59
LDB1-201ENST00000361198 ASNSP08243 561 aa25.01■■□□□ 1.59
LDB1-201ENST00000361198 AMPD2Q01433 879 aa25.01■■□□□ 1.59
LDB1-201ENST00000361198 SYT2Q8N9I0 419 aaPredicted RBP25.01■■□□□ 1.59
LDB1-201ENST00000361198 SCFD1Q8WVM8 642 aa25.01■■□□□ 1.59
LDB1-201ENST00000361198 ZHX3Q9H4I2 956 aa25.01■■□□□ 1.59
LDB1-201ENST00000361198 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.01■■□□□ 1.59
LDB1-201ENST00000361198 ZBTB7AO95365 584 aa25.01■■□□□ 1.59
LDB1-201ENST00000361198 UBXN2AP68543 259 aa25.01■■□□□ 1.59
LDB1-201ENST00000361198 FAM160B2Q86V87 743 aa25.01■■□□□ 1.59
LDB1-201ENST00000361198 A0A1W2PQJ5 194 aa25■■□□□ 1.59
LDB1-201ENST00000361198 CCDC66A2RUB6 948 aa25■■□□□ 1.59
LDB1-201ENST00000361198 TGFB2P61812 414 aa25■■□□□ 1.59
LDB1-201ENST00000361198 GIT2Q14161 759 aa25■■□□□ 1.59
LDB1-201ENST00000361198 RASA3Q14644 834 aa25■■□□□ 1.59
LDB1-201ENST00000361198 TAOK3Q9H2K8 898 aa25■■□□□ 1.59
LDB1-201ENST00000361198 EMILIN3Q9NT22 766 aa25■■□□□ 1.59
LDB1-201ENST00000361198 FEM1BQ9UK73 627 aa25■■□□□ 1.59
LDB1-201ENST00000361198 MRPL11Q9Y3B7 192 aaKnown RBP25■■□□□ 1.59
LDB1-201ENST00000361198 EPHB6O15197 1021 aa25■■□□□ 1.59
LDB1-201ENST00000361198 EGFRP00533 1210 aa25■■□□□ 1.59
LDB1-201ENST00000361198 OAS2P29728 719 aaKnown RBP25■■□□□ 1.59
LDB1-201ENST00000361198 BEND6Q5SZJ8 279 aaPredicted RBP25■■□□□ 1.59
LDB1-201ENST00000361198 ZNF662Q6ZS27 426 aa25■■□□□ 1.59
LDB1-201ENST00000361198 TEX2Q8IWB9 1127 aa25■■□□□ 1.59
LDB1-201ENST00000361198 MSL3Q8N5Y2 521 aaKnown RBP25■■□□□ 1.59
LDB1-201ENST00000361198 JDP2Q8WYK2 163 aa25■■□□□ 1.59
LDB1-201ENST00000361198 EIF2AK1Q9BQI3 630 aaKnown RBP25■■□□□ 1.59
LDB1-201ENST00000361198 COL4A3BPQ9Y5P4 624 aa25■■□□□ 1.59
LDB1-201ENST00000361198 STK24Q9Y6E0 443 aa25■■□□□ 1.59
LDB1-201ENST00000361198 DALRD3Q5D0E6 543 aaKnown RBP24.99■■□□□ 1.59
LDB1-201ENST00000361198 LDHDQ86WU2 507 aa24.99■■□□□ 1.59
LDB1-201ENST00000361198 KCTD10Q9H3F6 313 aa24.99■■□□□ 1.59
LDB1-201ENST00000361198 HAUS4Q9H6D7 363 aa24.99■■□□□ 1.59
LDB1-201ENST00000361198 FAM207AQ9NSI2 230 aaPredicted RBP24.99■■□□□ 1.59
LDB1-201ENST00000361198 ZNHIT6Q9NWK9 470 aaKnown RBP24.99■■□□□ 1.59
LDB1-201ENST00000361198 RGL1Q9NZL6 768 aa24.99■■□□□ 1.59
LDB1-201ENST00000361198 PNKPQ96T60 521 aa24.98■■□□□ 1.59
LDB1-201ENST00000361198 REEP2Q9BRK0 252 aa24.98■■□□□ 1.59
LDB1-201ENST00000361198 POLR3CQ9BUI4 534 aaPredicted RBP24.98■■□□□ 1.59
LDB1-201ENST00000361198 PHF20L1A8MW92 1017 aa24.98■■□□□ 1.59
LDB1-201ENST00000361198 POLR3GO15318 223 aaPredicted RBP24.98■■□□□ 1.59
LDB1-201ENST00000361198 HERVK_113P62684 666 aa24.98■■□□□ 1.59
LDB1-201ENST00000361198 OTOP1Q7RTM1 612 aa24.98■■□□□ 1.59
LDB1-201ENST00000361198 ZFP91Q96JP5 570 aaPredicted RBP24.98■■□□□ 1.59
LDB1-201ENST00000361198 ZNF341Q9BYN7 854 aa24.98■■□□□ 1.59
LDB1-201ENST00000361198 NHEJ1Q9H9Q4 299 aaPredicted RBP24.98■■□□□ 1.59
LDB1-201ENST00000361198 TRIM10Q9UDY6 481 aa24.98■■□□□ 1.59
LDB1-201ENST00000361198 FER1L6Q2WGJ9 1857 aa24.97■■□□□ 1.59
LDB1-201ENST00000361198 CTAGE15A4D2H0 777 aa24.97■■□□□ 1.59
LDB1-201ENST00000361198 TUBBP07437 444 aa24.97■■□□□ 1.59
LDB1-201ENST00000361198 CTAGE8P0CG41 777 aa24.97■■□□□ 1.59
LDB1-201ENST00000361198 CASP5P51878 434 aa24.97■■□□□ 1.59
LDB1-201ENST00000361198 CTAGE6Q86UF2 777 aa24.97■■□□□ 1.59
LDB1-201ENST00000361198 CTAGE4Q8IX94 777 aa24.97■■□□□ 1.59
LDB1-201ENST00000361198 CCDC155Q8N6L0 562 aa24.97■■□□□ 1.59
LDB1-201ENST00000361198 BHMT2Q9H2M3 363 aa24.97■■□□□ 1.59
LDB1-201ENST00000361198 MMRN2Q9H8L6 949 aa24.97■■□□□ 1.59
LDB1-201ENST00000361198 MYO6Q9UM54 1294 aa24.97■■□□□ 1.59
LDB1-201ENST00000361198 PSMD10O75832 226 aa24.97■■□□□ 1.59
LDB1-201ENST00000361198 INPP5BP32019 993 aa24.97■■□□□ 1.59
LDB1-201ENST00000361198 IQCDQ96DY2 449 aa24.97■■□□□ 1.59
LDB1-201ENST00000361198 TFR2Q9UP52 801 aa24.97■■□□□ 1.59
LDB1-201ENST00000361198 PTGER2P43116 358 aa24.96■■□□□ 1.59
LDB1-201ENST00000361198 CCDC40Q4G0X9 1142 aa24.96■■□□□ 1.59
LDB1-201ENST00000361198 LRCH2Q5VUJ6 765 aa24.96■■□□□ 1.59
LDB1-201ENST00000361198 CEP63Q96MT8 703 aa24.96■■□□□ 1.59
LDB1-201ENST00000361198 TEPSINQ96N21 525 aa24.96■■□□□ 1.59
LDB1-201ENST00000361198 HSD17B14Q9BPX1 270 aa24.96■■□□□ 1.59
LDB1-201ENST00000361198 TANGO6Q9C0B7 1094 aa24.96■■□□□ 1.59
LDB1-201ENST00000361198 GUCA1BQ9UMX6 200 aa24.96■■□□□ 1.59
LDB1-201ENST00000361198 ATAD5Q96QE3 1844 aa24.96■■□□□ 1.59
LDB1-201ENST00000361198 NFKBIEO00221 500 aa24.96■■□□□ 1.59
LDB1-201ENST00000361198 TFRCP02786 760 aaKnown RBP24.96■■□□□ 1.59
LDB1-201ENST00000361198 AGBL1Q96MI9 1066 aa24.96■■□□□ 1.59
LDB1-201ENST00000361198 ZCCHC17Q9NP64 241 aaKnown RBP24.96■■□□□ 1.59
LDB1-201ENST00000361198 PLAGL2Q9UPG8 496 aa24.96■■□□□ 1.59
LDB1-201ENST00000361198 CYLC1P35663 651 aaPredicted RBP24.95■■□□□ 1.58
LDB1-201ENST00000361198 CTTNQ14247 550 aaKnown RBP24.95■■□□□ 1.58
LDB1-201ENST00000361198 CEP55Q53EZ4 464 aa24.95■■□□□ 1.58
LDB1-201ENST00000361198 SFR1Q86XK3 245 aa24.95■■□□□ 1.58
LDB1-201ENST00000361198 L1RE1Q9UN81 338 aa24.95■■□□□ 1.58
LDB1-201ENST00000361198 RABGAP1Q9Y3P9 1069 aa24.95■■□□□ 1.58
LDB1-201ENST00000361198 RSPH10B2B2RC85 870 aa24.95■■□□□ 1.58
LDB1-201ENST00000361198 CHMP2AO43633 222 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms