RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 USP11P51784 963 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 CRY2Q49AN0 593 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 MIER3Q7Z3K6 550 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 IRF2BP1Q8IU81 584 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 CERKQ8TCT0 537 aa12.29□□□□□ -0.44
SSU72-202ENST00000359060 GOLGA6BA6NDN3 693 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 AFPP02771 609 aaKnown RBP12.28□□□□□ -0.44
SSU72-202ENST00000359060 SEMA3FQ13275 785 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 SLC30A10Q6XR72 485 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 PROM2Q8N271 834 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 FAM184BQ9ULE4 1060 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 ZBTB12Q9Y330 459 aaPredicted RBP12.28□□□□□ -0.44
SSU72-202ENST00000359060 TNFAIP3P21580 790 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 SHROOM1Q2M3G4 852 aaPredicted RBP12.28□□□□□ -0.44
SSU72-202ENST00000359060 PPP4R3AQ6IN85 833 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 APOBEC3HQ6NTF7 200 aaKnown RBP12.28□□□□□ -0.44
SSU72-202ENST00000359060 NFRKBQ6P4R8 1299 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 C15orf52Q6ZUT6 534 aaKnown RBP12.28□□□□□ -0.44
SSU72-202ENST00000359060 LMBR1Q8WVP7 490 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 NYAP2Q9P242 653 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 STAT1P42224 750 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 TNNC1P63316 161 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 CENPPQ6IPU0 288 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 FAM107BQ9H098 131 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 ZNF446Q9NWS9 450 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 FHOD1Q9Y613 1164 aa12.28□□□□□ -0.44
SSU72-202ENST00000359060 SORBS3O60504 671 aa12.27□□□□□ -0.44
SSU72-202ENST00000359060 PEX26Q7Z412 305 aa12.27□□□□□ -0.44
SSU72-202ENST00000359060 FAM186BQ8IYM0 893 aa12.27□□□□□ -0.44
SSU72-202ENST00000359060 DNAJC7Q99615 494 aa12.27□□□□□ -0.44
SSU72-202ENST00000359060 MMTAG2Q9BU76 263 aaKnown RBP12.27□□□□□ -0.44
SSU72-202ENST00000359060 TRIM31Q9BZY9 425 aa12.27□□□□□ -0.44
SSU72-202ENST00000359060 STK24Q9Y6E0 443 aa12.27□□□□□ -0.44
SSU72-202ENST00000359060 SERPING1P05155 500 aa12.27□□□□□ -0.45
SSU72-202ENST00000359060 PBX1P40424 430 aa12.27□□□□□ -0.45
SSU72-202ENST00000359060 GUCY2FP51841 1108 aa12.27□□□□□ -0.45
SSU72-202ENST00000359060 CFAP58Q5T655 872 aa12.27□□□□□ -0.45
SSU72-202ENST00000359060 ERGIC2Q96RQ1 377 aa12.27□□□□□ -0.45
SSU72-202ENST00000359060 PNKPQ96T60 521 aa12.27□□□□□ -0.45
SSU72-202ENST00000359060 METTL14Q9HCE5 456 aaKnown RBP12.27□□□□□ -0.45
SSU72-202ENST00000359060 ZNF277Q9NRM2 450 aaPredicted RBP12.27□□□□□ -0.45
SSU72-202ENST00000359060 GCNT4Q9P109 453 aa12.27□□□□□ -0.45
SSU72-202ENST00000359060 TESPA1A2RU30 521 aaPredicted RBP12.27□□□□□ -0.45
SSU72-202ENST00000359060 K7ENM7 598 aa12.27□□□□□ -0.45
SSU72-202ENST00000359060 IFFO1Q0D2I5 559 aa12.27□□□□□ -0.45
SSU72-202ENST00000359060 APTXQ7Z2E3 356 aaKnown RBP12.27□□□□□ -0.45
SSU72-202ENST00000359060 AFAP1L1Q8TED9 768 aa12.27□□□□□ -0.45
SSU72-202ENST00000359060 CTNNBL1Q8WYA6 563 aaPredicted RBP12.27□□□□□ -0.45
SSU72-202ENST00000359060 PRMT6Q96LA8 375 aaPredicted RBP12.27□□□□□ -0.45
SSU72-202ENST00000359060 TEKT3Q9BXF9 490 aa12.27□□□□□ -0.45
SSU72-202ENST00000359060 DUOX1Q9NRD9 1551 aa12.27□□□□□ -0.45
SSU72-202ENST00000359060 HERVK_113P62684 666 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 PRKG1Q13976 671 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 DYDC2Q96IM9 177 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 PCIF1Q9H4Z3 704 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 SMARCAL1Q9NZC9 954 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 GLI3P10071 1580 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 MED24O75448 989 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 GFPT2O94808 682 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 H2AFZP0C0S5 128 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 PLA2G4AP47712 749 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 H2AFVQ71UI9 128 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 FAM76AQ8TAV0 307 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 FAM20AQ96MK3 541 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 CEP63Q96MT8 703 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 CEP72Q9P209 647 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 PRR12Q9ULL5 1215 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 PACSIN2Q9UNF0 486 aaPredicted RBP12.26□□□□□ -0.45
SSU72-202ENST00000359060 MYH13Q9UKX3 1938 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 BACH1O14867 736 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 ACTN1P12814 892 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 CDR1P51861 262 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 KNOP1Q1ED39 458 aaKnown RBP12.26□□□□□ -0.45
SSU72-202ENST00000359060 WDR78Q5VTH9 848 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 PDXDC1Q6P996 788 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 DAAM2Q86T65 1068 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 MTMR9Q96QG7 549 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 EIF2AK1Q9BQI3 630 aaKnown RBP12.26□□□□□ -0.45
SSU72-202ENST00000359060 REEP2Q9BRK0 252 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 PARVGQ9HBI0 331 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 SLIT2O94813 1529 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 MYH6P13533 1939 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 PHLPP1O60346 1717 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 GOLGA6CA6NDK9 693 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 OPA1O60313 960 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 ZEB2O60315 1214 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 LRRN2O75325 713 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 TBC1D8O95759 1140 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 GOLGA6DP0CG33 693 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 ECE1P42892 770 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 GUCY2DQ02846 1103 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 ADAT2Q7Z6V5 191 aaKnown RBP12.26□□□□□ -0.45
SSU72-202ENST00000359060 CATSPER3Q86XQ3 398 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 IFT20Q8IY31 132 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 ZDHHC15Q96MV8 337 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 KRT12Q99456 494 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 SH2D3AQ9BRG2 576 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 GOLGA6AQ9NYA3 693 aa12.26□□□□□ -0.45
SSU72-202ENST00000359060 NR3C1P04150 777 aa12.25□□□□□ -0.45
SSU72-202ENST00000359060 MAPK8IP2Q13387 824 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms