RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 NR1I3Q14994 352 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 ARSHQ5FYA8 562 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 TTI2Q6NXR4 508 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 MOXD1Q6UVY6 613 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 DUSP9Q99956 384 aaKnown RBP14.06□□□□□ -0.16
GGPS1-202ENST00000358966 EIF2AK1Q9BQI3 630 aaKnown RBP14.06□□□□□ -0.16
GGPS1-202ENST00000358966 SEMA6BQ9H3T3 888 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 R3HDMLQ9H3Y0 253 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 ELP3Q9H9T3 547 aa14.06□□□□□ -0.16
GGPS1-202ENST00000358966 ADD3Q9UEY8 706 aaKnown RBP14.06□□□□□ -0.16
GGPS1-202ENST00000358966 A0A1B0GTH6 734 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 SFI1A8K8P3 1242 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 CYP3A4P08684 503 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 COASYQ13057 564 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 TMEM132BQ14DG7 1078 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 TPH2Q8IWU9 490 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 RNF217Q8TC41 542 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 OTUD5Q96G74 571 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 ZNF577Q9BSK1 485 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 BHMT2Q9H2M3 363 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 RNF146Q9NTX7 359 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.05□□□□□ -0.16
GGPS1-202ENST00000358966 PSMA7O14818 248 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 CBFA2T2O43439 604 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 GAS7O60861 476 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 CYP11B2P19099 503 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 USP14P54578 494 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 BAATQ14032 418 aaPredicted RBP14.05□□□□□ -0.16
GGPS1-202ENST00000358966 TCP11X2Q5H9J9 407 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 UNC13DQ70J99 1090 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 OTOP1Q7RTM1 612 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 NELFCDQ8IXH7 590 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 DYDC2Q96IM9 177 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 UNC45AQ9H3U1 944 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 MAGEF1Q9HAY2 307 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 LCMT1Q9UIC8 334 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 AFG3L2Q9Y4W6 797 aa14.05□□□□□ -0.16
GGPS1-202ENST00000358966 OTOFQ9HC10 1997 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 PSMD10O75832 226 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 TTLL12Q14166 644 aaPredicted RBP14.04□□□□□ -0.16
GGPS1-202ENST00000358966 GPR162Q16538 588 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 CSGALNACT2Q8N6G5 542 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 NAP1L4Q99733 375 aaKnown RBP14.04□□□□□ -0.16
GGPS1-202ENST00000358966 RUSC1Q9BVN2 902 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 AS3MTQ9HBK9 375 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 KCNH7Q9NS40 1196 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 BMP2KQ9NSY1 1161 aaPredicted RBP14.04□□□□□ -0.16
GGPS1-202ENST00000358966 FAM53CQ9NYF3 392 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 ZNF214Q9UL59 606 aaPredicted RBP14.04□□□□□ -0.16
GGPS1-202ENST00000358966 TELO2Q9Y4R8 837 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 TMEM150BA6NC51 233 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 IPO5O00410 1097 aaKnown RBP14.04□□□□□ -0.16
GGPS1-202ENST00000358966 N4BP3O15049 544 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 TPM3P06753 285 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 CASP5P51878 434 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 SLC12A3P55017 1021 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 SUPT20HL1Q3ZLR7 823 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 GPIHBP1Q8IV16 184 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 FAM20AQ96MK3 541 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 IKZF4Q9H2S9 585 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 PANK4Q9NVE7 773 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 DONSONQ9NYP3 566 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.04□□□□□ -0.16
GGPS1-202ENST00000358966 JRKLQ9Y4A0 524 aa14.04□□□□□ -0.16
GGPS1-202ENST00000358966 KDM3AQ9Y4C1 1321 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 RNF225M0QZC1 329 aaPredicted RBP14.03□□□□□ -0.16
GGPS1-202ENST00000358966 ZBED4O75132 1171 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 KRT18P05783 430 aaKnown RBP14.03□□□□□ -0.16
GGPS1-202ENST00000358966 MYL1P05976 194 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 HYIQ5T013 277 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 HAUS3Q68CZ6 603 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 SPECC1LQ69YQ0 1117 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 RNF207Q6ZRF8 634 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 P2RX5Q93086 422 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 RMDN3Q96TC7 470 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 NT5C3AQ9H0P0 336 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 ATP9AO75110 1047 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 RPA1P27694 616 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 COPB1P53618 953 aaKnown RBP14.03□□□□□ -0.16
GGPS1-202ENST00000358966 ITGB3BPQ13352 177 aaPredicted RBP14.03□□□□□ -0.16
GGPS1-202ENST00000358966 NBPF20Q3BBV1 942 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 CNNM4Q6P4Q7 775 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 REPS2Q8NFH8 660 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 REEP2Q9BRK0 252 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 IMPACTQ9P2X3 320 aa14.03□□□□□ -0.16
GGPS1-202ENST00000358966 RBBP6Q7Z6E9 1792 aaKnown RBP14.03□□□□□ -0.16
GGPS1-202ENST00000358966 TESPA1A2RU30 521 aaPredicted RBP14.02□□□□□ -0.16
GGPS1-202ENST00000358966 SPDYE16A6NNV3 312 aaPredicted RBP14.02□□□□□ -0.16
GGPS1-202ENST00000358966 TBX3O15119 743 aa14.02□□□□□ -0.16
GGPS1-202ENST00000358966 SLITRK3O94933 977 aa14.02□□□□□ -0.16
GGPS1-202ENST00000358966 KLK7P49862 253 aa14.02□□□□□ -0.16
GGPS1-202ENST00000358966 STIM1Q13586 685 aa14.02□□□□□ -0.16
GGPS1-202ENST00000358966 HERC4Q5GLZ8 1057 aaPredicted RBP14.02□□□□□ -0.16
GGPS1-202ENST00000358966 NEK11Q8NG66 645 aa14.02□□□□□ -0.16
GGPS1-202ENST00000358966 SLC5A5Q92911 643 aa14.02□□□□□ -0.16
GGPS1-202ENST00000358966 MXRA8Q9BRK3 442 aa14.02□□□□□ -0.16
GGPS1-202ENST00000358966 ZNF408Q9H9D4 720 aa14.02□□□□□ -0.16
GGPS1-202ENST00000358966 PTPRFP10586 1907 aa14.02□□□□□ -0.17
GGPS1-202ENST00000358966 DOCK5Q9H7D0 1870 aa14.02□□□□□ -0.17
GGPS1-202ENST00000358966 DSG3P32926 999 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms