RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 SMTNP53814 917 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 CCDC38Q502W7 563 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 RNF10Q8N5U6 811 aaKnown RBP13.68□□□□□ -0.22
BDNF-202ENST00000356660 DDX12PQ92771 950 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 EYA3Q99504 573 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 CELF4Q9BZC1 486 aaKnown RBP13.68□□□□□ -0.22
BDNF-202ENST00000356660 RAB17Q9H0T7 212 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 ARMCX3Q9UH62 379 aaPredicted RBP13.68□□□□□ -0.22
BDNF-202ENST00000356660 PTPN22Q9Y2R2 807 aa13.68□□□□□ -0.22
BDNF-202ENST00000356660 EPHB6O15197 1021 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 MYL1P05976 194 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 LRRC14Q15048 493 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 SUSD4Q5VX71 490 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 PDXDC1Q6P996 788 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 KIAA0825Q8IV33 1275 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 KCNV2Q8TDN2 545 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 GPR101Q96P66 508 aaPredicted RBP13.67□□□□□ -0.22
BDNF-202ENST00000356660 CUEDC2Q9H467 287 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 PNMA2Q9UL42 364 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 CPP00450 1065 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 GPBP1Q86WP2 473 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 RDH13Q8NBN7 331 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 IFT74Q96LB3 600 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 CTTNBP2NLQ9P2B4 639 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 DAAM1Q9Y4D1 1078 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 TTI1O43156 1089 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 FAM13AO94988 1023 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 TNFAIP3P21580 790 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 ZNF211Q13398 564 aaPredicted RBP13.67□□□□□ -0.22
BDNF-202ENST00000356660 DIXDC1Q155Q3 683 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 CCDC174Q6PII3 467 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 KCNV1Q6PIU1 500 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 SLC44A5Q8NCS7 719 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 DUSP9Q99956 384 aaKnown RBP13.67□□□□□ -0.22
BDNF-202ENST00000356660 PACSIN1Q9BY11 444 aa13.67□□□□□ -0.22
BDNF-202ENST00000356660 DNAJC17Q9NVM6 304 aaKnown RBP13.67□□□□□ -0.22
BDNF-202ENST00000356660 SRP68Q9UHB9 627 aaKnown RBP13.67□□□□□ -0.22
BDNF-202ENST00000356660 KDM6AO15550 1401 aaPredicted RBP13.66□□□□□ -0.22
BDNF-202ENST00000356660 CCDC169A6NNP5 214 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 PAX7P23759 505 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 NR2F2P24468 414 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 MKRN4PQ13434 485 aaPredicted RBP13.66□□□□□ -0.22
BDNF-202ENST00000356660 INTS8Q75QN2 995 aaKnown RBP13.66□□□□□ -0.22
BDNF-202ENST00000356660 HS2ST1Q7LGA3 356 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 COA7Q96BR5 231 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 STMN4Q9H169 189 aaPredicted RBP13.66□□□□□ -0.22
BDNF-202ENST00000356660 CNTNAP5Q8WYK1 1306 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 DDX39AO00148 427 aaKnown RBP13.66□□□□□ -0.22
BDNF-202ENST00000356660 BIRC3Q13489 604 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 CUL1Q13616 776 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 ERFEQ4G0M1 354 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 KLHDC7AQ5VTJ3 777 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 DPP8Q6V1X1 898 aaPredicted RBP13.66□□□□□ -0.22
BDNF-202ENST00000356660 AK8Q96MA6 479 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 FAM205AQ6ZU69 1335 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 TCRBV5S4A2TA0A5A2 114 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 ZNF263O14978 683 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 XRCC5P13010 732 aaKnown RBP13.66□□□□□ -0.22
BDNF-202ENST00000356660 CDC37Q16543 378 aaPredicted RBP13.66□□□□□ -0.22
BDNF-202ENST00000356660 EXOC3L4Q17RC7 722 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 FBF1Q8TES7 1133 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 CHMP6Q96FZ7 201 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 ERGIC2Q96RQ1 377 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 TRIM51Q9BSJ1 452 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 DDX20Q9UHI6 824 aaKnown RBP13.66□□□□□ -0.22
BDNF-202ENST00000356660 KIAA1024Q9UPX6 916 aa13.66□□□□□ -0.22
BDNF-202ENST00000356660 A0A087X0T9 212 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 FAM228BP0C875 321 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 POTEJP0CG39 1038 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 COPB2P35606 906 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 IL6STP40189 918 aaPredicted RBP13.65□□□□□ -0.22
BDNF-202ENST00000356660 MEA1Q16626 185 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 ZNF507Q8TCN5 953 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 CDCA7Q9BWT1 371 aaPredicted RBP13.65□□□□□ -0.22
BDNF-202ENST00000356660 YIPF3Q9GZM5 350 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 USP21Q9UK80 565 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 PCDHA12Q9UN75 941 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 NOC2LQ9Y3T9 749 aaKnown RBP13.65□□□□□ -0.22
BDNF-202ENST00000356660 SPOPO43791 374 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 SHOX2O60902 331 aaPredicted RBP13.65□□□□□ -0.22
BDNF-202ENST00000356660 GFPT2O94808 682 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 CFBP00751 764 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 CDC25CP30307 473 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 SKOR1P84550 965 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 RBBP5Q15291 538 aaKnown RBP13.65□□□□□ -0.22
BDNF-202ENST00000356660 SEC23AQ15436 765 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 IL17AQ16552 155 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 STXBP4Q6ZWJ1 553 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 BRINP3Q76B58 766 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 GDAP1Q8TB36 358 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 RAPGEF5Q92565 580 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 GJA10Q969M2 543 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 TMEM260Q9NX78 707 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 ASIC3Q9UHC3 531 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 ATP6V0A2Q9Y487 856 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 ENO4A6NNW6 628 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 OPLAHO14841 1288 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 CETN2P41208 172 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 STAT1P42224 750 aa13.65□□□□□ -0.22
BDNF-202ENST00000356660 RCAN1P53805 252 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms