RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 RHBDL2Q9NX52 303 aa17.17■□□□□ 0.34
RTN3-205ENST00000356000 LRCH1Q9Y2L9 728 aa17.17■□□□□ 0.34
RTN3-205ENST00000356000 NDUFB9Q9Y6M9 179 aa17.17■□□□□ 0.34
RTN3-205ENST00000356000 PLSCR1O15162 318 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 MMP13P45452 471 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 PAK1Q13153 545 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 LSAMPQ13449 338 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 BTG3Q14201 252 aaPredicted RBP17.16■□□□□ 0.34
RTN3-205ENST00000356000 DIXDC1Q155Q3 683 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 CNPY1Q3B7I2 92 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 KLHDC7AQ5VTJ3 777 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 KRT26Q7Z3Y9 468 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 EXOC3L1Q86VI1 746 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 PIGOQ8TEQ8 1089 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 PPP1R14BQ96C90 147 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 PDP2Q9P2J9 529 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 GGT7Q9UJ14 662 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 PNMA2Q9UL42 364 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 USP15Q9Y4E8 981 aaPredicted RBP17.16■□□□□ 0.34
RTN3-205ENST00000356000 MAP3K19Q56UN5 1328 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 MYH1P12882 1939 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 BHMG1C9JSJ3 638 aaPredicted RBP17.16■□□□□ 0.34
RTN3-205ENST00000356000 GCP02774 474 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 SERPINB4P48594 390 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 PTDSS1P48651 473 aaKnown RBP17.16■□□□□ 0.34
RTN3-205ENST00000356000 CACNA2D1P54289 1103 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 CEP128Q6ZU80 1094 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 ZNF365Q70YC5 407 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 UTP4Q969X6 686 aaKnown RBP17.16■□□□□ 0.34
RTN3-205ENST00000356000 GBP5Q96PP8 586 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 PCDH18Q9HCL0 1135 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 TRIM33Q9UPN9 1127 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
RTN3-205ENST00000356000 PIK3C2AO00443 1686 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 EN1Q05925 392 aaPredicted RBP17.15■□□□□ 0.34
RTN3-205ENST00000356000 CCDC15Q0P6D6 951 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 SLC4A8Q2Y0W8 1093 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 BICDL1Q6ZP65 573 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 IRF2BP1Q8IU81 584 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 RETREG2Q8NC44 543 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 ZNF333Q96JL9 665 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 CCDC42Q96M95 316 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 MTFR1LQ9H019 292 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 UNC45AQ9H3U1 944 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 MON2Q7Z3U7 1717 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 A0A087X0B3 334 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 HMGB2P26583 209 aaKnown RBP17.15■□□□□ 0.34
RTN3-205ENST00000356000 PDE6CP51160 858 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 PHEXP78562 749 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 PARP6Q2NL67 630 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 NOSTRINQ8IVI9 506 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 KBTBD3Q8NAB2 608 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 SLC17A8Q8NDX2 589 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 HAUS7Q99871 368 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 CSRNP2Q9H175 543 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 ADAM7Q9H2U9 754 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 DBNLQ9UJU6 430 aaKnown RBP17.15■□□□□ 0.34
RTN3-205ENST00000356000 PNMA3Q9UL41 463 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 TMEM98Q9Y2Y6 226 aa17.15■□□□□ 0.34
RTN3-205ENST00000356000 PDS5AQ29RF7 1337 aaKnown RBP17.14■□□□□ 0.33
RTN3-205ENST00000356000 DDX60Q8IY21 1712 aaKnown RBP17.14■□□□□ 0.33
RTN3-205ENST00000356000 TNNC1P63316 161 aa17.14■□□□□ 0.33
RTN3-205ENST00000356000 SH2D4BQ5SQS7 431 aa17.14■□□□□ 0.33
RTN3-205ENST00000356000 RRAGBQ5VZM2 374 aa17.14■□□□□ 0.33
RTN3-205ENST00000356000 CCNJLQ8IV13 435 aa17.14■□□□□ 0.33
RTN3-205ENST00000356000 CCDC87Q9NVE4 849 aa17.14■□□□□ 0.33
RTN3-205ENST00000356000 USP31Q70CQ4 1352 aa17.14■□□□□ 0.33
RTN3-205ENST00000356000 DCAF8L1A6NGE4 600 aa17.14■□□□□ 0.33
RTN3-205ENST00000356000 LCA5LO95447 670 aa17.14■□□□□ 0.33
RTN3-205ENST00000356000 CTDSPL2Q05D32 466 aa17.14■□□□□ 0.33
RTN3-205ENST00000356000 NELFBQ8WX92 580 aa17.14■□□□□ 0.33
RTN3-205ENST00000356000 CORO1BQ9BR76 489 aa17.14■□□□□ 0.33
RTN3-205ENST00000356000 SPATA16Q9BXB7 569 aa17.14■□□□□ 0.33
RTN3-205ENST00000356000 RXFP1Q9HBX9 757 aa17.14■□□□□ 0.33
RTN3-205ENST00000356000 RMND1Q9NWS8 449 aa17.14■□□□□ 0.33
RTN3-205ENST00000356000 PAIP2BQ9ULR5 123 aaKnown RBP17.14■□□□□ 0.33
RTN3-205ENST00000356000 MAGEA13PA6NCF6 341 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 SIGLEC16A6NMB1 481 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 O00370 1275 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 PJA2O43164 708 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 GNA14O95837 355 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 SH3BGRP55822 239 aaPredicted RBP17.13■□□□□ 0.33
RTN3-205ENST00000356000 EIF3BP55884 814 aaKnown RBP17.13■□□□□ 0.33
RTN3-205ENST00000356000 TRIM29Q14134 588 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 MUM1Q2TAK8 710 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 CCDC80Q76M96 950 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 MB21D2Q8IYB1 491 aaPredicted RBP17.13■□□□□ 0.33
RTN3-205ENST00000356000 KCNN1Q92952 543 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 KAZALD1Q96I82 304 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 NEUROG2Q9H2A3 272 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 LRRC4CQ9HCJ2 640 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 STRN4Q9NRL3 753 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 VPS54Q9P1Q0 977 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 COMMD3-BMI1R4GMX3 469 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 F8VZ95 297 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 H7C1D1 291 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 GFPT2O94808 682 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 SUN1O94901 812 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 APBA3O96018 575 aa17.13■□□□□ 0.33
RTN3-205ENST00000356000 YY1P25490 414 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms