RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 QKIQ96PU8 341 aaKnown RBP eCLIP8.62□□□□□ -1.034e-6■□□□□ 8.3
HTT-201ENST00000355072 STOML2Q9UJZ1 356 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 TLR3O15455 904 aaKnown RBP8.62□□□□□ -1.03
HTT-201ENST00000355072 CA4P22748 312 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 CASC4Q6P4E1 433 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 MAGED4Q96JG8 741 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 GPBP1L1Q9HC44 474 aaPredicted RBP8.62□□□□□ -1.03
HTT-201ENST00000355072 TRPC5Q9UL62 973 aaPredicted RBP8.62□□□□□ -1.03
HTT-201ENST00000355072 RUNX1T1Q06455 604 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 SPDYCQ5MJ68 293 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 JADE3Q92613 823 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 MYH13Q9UKX3 1938 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 KRT7P08729 469 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 SH3TC1Q8TE82 1336 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 EFL1Q7Z2Z2 1120 aaKnown RBP8.62□□□□□ -1.03
HTT-201ENST00000355072 DDX42Q86XP3 938 aaKnown RBP eCLIP8.62□□□□□ -1.03
HTT-201ENST00000355072 ARHGEF35A5YM69 484 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 EXOC3O60645 756 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 KLHL41O60662 606 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 RXRGP48443 463 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 PPP2R2AP63151 447 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 SURF1Q15526 300 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 TAF1BQ53T94 588 aaPredicted RBP8.62□□□□□ -1.03
HTT-201ENST00000355072 UNC13BO14795 1591 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 KCNK3O14649 394 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 ELOA2Q8IYF1 753 aaPredicted RBP8.62□□□□□ -1.03
HTT-201ENST00000355072 ARHGEF10LQ9HCE6 1279 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 S100BP04271 92 aaPredicted RBP8.62□□□□□ -1.03
HTT-201ENST00000355072 SLC39A14Q15043 492 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 FAM133BQ5BKY9 247 aaKnown RBP8.62□□□□□ -1.03
HTT-201ENST00000355072 TTC38Q5R3I4 469 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 EPM2AIP1Q7L775 607 aaPredicted RBP8.62□□□□□ -1.03
HTT-201ENST00000355072 SYT2Q8N9I0 419 aaPredicted RBP8.62□□□□□ -1.03
HTT-201ENST00000355072 CATSPER2Q96P56 530 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 CCDC90BQ9GZT6 254 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 MAGEB6P1A0A0J9YX57 407 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 ART3Q13508 389 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 NUDT16Q96DE0 195 aaKnown RBP8.62□□□□□ -1.03
HTT-201ENST00000355072 NSMCE4AQ9NXX6 385 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 MTMR7Q9Y216 660 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 GCNT3O95395 438 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 ARHGAP44Q17R89 818 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 ZNF354CQ86Y25 554 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 RFWD2Q8NHY2 731 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 FAR2Q96K12 515 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 KDRP35968 1356 aa8.62□□□□□ -1.03
HTT-201ENST00000355072 WASLO00401 505 aaPredicted RBP8.61□□□□□ -1.03
HTT-201ENST00000355072 ASAP2O43150 1006 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 COPB1P53618 953 aaKnown RBP8.61□□□□□ -1.03
HTT-201ENST00000355072 GNPTABQ3T906 1256 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 WAPLQ7Z5K2 1190 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 PARVGQ9HBI0 331 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 KRT6AP02538 564 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 KRT6BP04259 564 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 LRRC8EQ6NSJ5 796 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 HIBCHQ6NVY1 386 aaPredicted RBP8.61□□□□□ -1.03
HTT-201ENST00000355072 TGS1Q96RS0 853 aaKnown RBP8.61□□□□□ -1.03
HTT-201ENST00000355072 TINF2Q9BSI4 451 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 RRAGDQ9NQL2 400 aaPredicted RBP8.61□□□□□ -1.03
HTT-201ENST00000355072 ATAD3AQ9NVI7 634 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 RASA4BC9J798 803 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 EIF3HO15372 352 aaKnown RBP eCLIP8.61□□□□□ -1.031e-6■■■■□ 23.2
HTT-201ENST00000355072 RASA4O43374 803 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 FAM107AO95990 144 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 SRGAP2CP0DJJ0 459 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 AKAP4Q5JQC9 854 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 PRR23CQ6ZRP0 262 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 HDDC2Q7Z4H3 204 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 CCDC15Q0P6D6 951 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 EPS8Q12929 822 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 CEP44Q9C0F1 390 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 TMEM206Q9H813 350 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 ERBB4Q15303 1308 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 ATXN3P54252 364 aaPredicted RBP8.61□□□□□ -1.03
HTT-201ENST00000355072 CRELD2Q6UXH1 353 aaPredicted RBP8.61□□□□□ -1.03
HTT-201ENST00000355072 CXorf56Q9H5V9 222 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 UGGT1Q9NYU2 1555 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 A0A1W2PQC6 194 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 TMEM191CA6NGB0 347 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 TMEM191BP0C7N4 346 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 ECE1P42892 770 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 GOLGA8FQ08AF8 430 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 GOLGA8DPQ0D2H9 430 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 YTHDF3Q7Z739 585 aaKnown RBP8.61□□□□□ -1.03
HTT-201ENST00000355072 DDHD1Q8NEL9 900 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 ABTB1Q969K4 478 aaPredicted RBP8.61□□□□□ -1.03
HTT-201ENST00000355072 CYP26B1Q9NR63 512 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 SUFUQ9UMX1 484 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 IGHDP01880 384 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 INPP5AQ14642 412 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 RRAGAQ7L523 313 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 MFN1Q8IWA4 741 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 APPBP2Q92624 585 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 CIDEBQ9UHD4 219 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 SLC4A4Q9Y6R1 1079 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 FBXO38Q6PIJ6 1188 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 TRIM72Q6ZMU5 477 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 KRCC1Q9NPI7 259 aaPredicted RBP8.61□□□□□ -1.03
HTT-201ENST00000355072 TSPYL6Q8N831 410 aa8.61□□□□□ -1.03
HTT-201ENST00000355072 RSL24D1Q9UHA3 163 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms