RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 SAMD1Q6SPF0 538 aaPredicted RBP21.56■■□□□ 1.04
COL13A1-201ENST00000354547 P2RX7Q99572 595 aaKnown RBP21.56■■□□□ 1.04
COL13A1-201ENST00000354547 CEP72Q9P209 647 aa21.56■■□□□ 1.04
COL13A1-201ENST00000354547 GOLGA6BA6NDN3 693 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 DDTLA6NHG4 134 aaPredicted RBP21.55■■□□□ 1.04
COL13A1-201ENST00000354547 ANKRD65E5RJM6 399 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 TCP1P17987 556 aaKnown RBP21.55■■□□□ 1.04
COL13A1-201ENST00000354547 NR2F2P24468 414 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 HOXA13P31271 388 aaPredicted RBP21.55■■□□□ 1.04
COL13A1-201ENST00000354547 ARSHQ5FYA8 562 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 ATP6V0A2Q9Y487 856 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 LTBP4Q8N2S1 1624 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 A0A087X0T9 212 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 ESYT3A0FGR9 886 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 TRIM37O94972 964 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 FAM228BP0C875 321 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 KLRC1P26715 233 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 KLHL30Q0D2K2 578 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 CERKLQ49MI3 558 aaPredicted RBP21.55■■□□□ 1.04
COL13A1-201ENST00000354547 MSL3Q8N5Y2 521 aaKnown RBP21.55■■□□□ 1.04
COL13A1-201ENST00000354547 ATF5Q9Y2D1 282 aaPredicted RBP21.55■■□□□ 1.04
COL13A1-201ENST00000354547 KDM3AQ9Y4C1 1321 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 LCA5LO95447 670 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 GCFC2P16383 781 aaKnown RBP21.55■■□□□ 1.04
COL13A1-201ENST00000354547 KIAA0753Q2KHM9 967 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 DNAJC21Q5F1R6 531 aaKnown RBP21.55■■□□□ 1.04
COL13A1-201ENST00000354547 TCERG1LQ5VWI1 586 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 GOLPH3Q9H4A6 298 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 VIPAS39Q9H9C1 493 aa21.55■■□□□ 1.04
COL13A1-201ENST00000354547 CWC15Q9P013 229 aaKnown RBP21.55■■□□□ 1.04
COL13A1-201ENST00000354547 AGPSO00116 658 aa21.54■■□□□ 1.04
COL13A1-201ENST00000354547 PRPF6O94906 941 aaKnown RBP21.54■■□□□ 1.04
COL13A1-201ENST00000354547 SERPING1P05155 500 aa21.54■■□□□ 1.04
COL13A1-201ENST00000354547 CRKP46108 304 aa21.54■■□□□ 1.04
COL13A1-201ENST00000354547 KCNH2Q12809 1159 aa21.54■■□□□ 1.04
COL13A1-201ENST00000354547 DCAF17Q5H9S7 520 aaPredicted RBP21.54■■□□□ 1.04
COL13A1-201ENST00000354547 CATSPER3Q86XQ3 398 aa21.54■■□□□ 1.04
COL13A1-201ENST00000354547 RSPH14Q9UHP6 348 aa21.54■■□□□ 1.04
COL13A1-201ENST00000354547 FAM184BQ9ULE4 1060 aa21.54■■□□□ 1.04
COL13A1-201ENST00000354547 ABCB11O95342 1321 aa21.54■■□□□ 1.04
COL13A1-201ENST00000354547 ZSCAN5CA6NGD5 496 aaPredicted RBP21.54■■□□□ 1.04
COL13A1-201ENST00000354547 SFI1A8K8P3 1242 aa21.54■■□□□ 1.04
COL13A1-201ENST00000354547 MUM1L1Q5H9M0 696 aa21.54■■□□□ 1.04
COL13A1-201ENST00000354547 C8orf74Q6P047 294 aa21.54■■□□□ 1.04
COL13A1-201ENST00000354547 TRIM59Q8IWR1 403 aa21.54■■□□□ 1.04
COL13A1-201ENST00000354547 MMGT1Q8N4V1 131 aa21.54■■□□□ 1.04
COL13A1-201ENST00000354547 IFT81Q8WYA0 676 aa21.54■■□□□ 1.04
COL13A1-201ENST00000354547 PCDHA2Q9Y5H9 948 aa21.54■■□□□ 1.04
COL13A1-201ENST00000354547 ZC3H4Q9UPT8 1303 aaKnown RBP21.54■■□□□ 1.04
COL13A1-201ENST00000354547 SLC9A1P19634 815 aa21.53■■□□□ 1.04
COL13A1-201ENST00000354547 ARHGAP4P98171 946 aa21.53■■□□□ 1.04
COL13A1-201ENST00000354547 SPICE1Q8N0Z3 855 aa21.53■■□□□ 1.04
COL13A1-201ENST00000354547 CYP2W1Q8TAV3 490 aa21.53■■□□□ 1.04
COL13A1-201ENST00000354547 TRIM66O15016 1216 aa21.53■■□□□ 1.04
COL13A1-201ENST00000354547 SFR1Q86XK3 245 aa21.53■■□□□ 1.04
COL13A1-201ENST00000354547 C10orf67Q8IYJ2 551 aa21.53■■□□□ 1.04
COL13A1-201ENST00000354547 DHX36Q9H2U1 1008 aaKnown RBP21.53■■□□□ 1.04
COL13A1-201ENST00000354547 KCTD10Q9H3F6 313 aa21.53■■□□□ 1.04
COL13A1-201ENST00000354547 RSPH10B2B2RC85 870 aa21.53■■□□□ 1.04
COL13A1-201ENST00000354547 CETN3O15182 167 aa21.53■■□□□ 1.04
COL13A1-201ENST00000354547 RSPH10BP0C881 870 aa21.53■■□□□ 1.04
COL13A1-201ENST00000354547 AARSP49588 968 aaKnown RBP eCLIP21.53■■□□□ 1.04
COL13A1-201ENST00000354547 TTC19Q6DKK2 380 aaPredicted RBP21.53■■□□□ 1.04
COL13A1-201ENST00000354547 ZNF622Q969S3 477 aaKnown RBP eCLIP21.53■■□□□ 1.04
COL13A1-201ENST00000354547 NHSQ6T4R5 1651 aa21.52■■□□□ 1.04
COL13A1-201ENST00000354547 SSU72P8A0A1W2PR75 194 aa21.52■■□□□ 1.04
COL13A1-201ENST00000354547 MEIS2O14770 477 aa21.52■■□□□ 1.04
COL13A1-201ENST00000354547 HAUS3Q68CZ6 603 aa21.52■■□□□ 1.04
COL13A1-201ENST00000354547 AENQ8WTP8 325 aaKnown RBP21.52■■□□□ 1.04
COL13A1-201ENST00000354547 IKZF4Q9H2S9 585 aa21.52■■□□□ 1.04
COL13A1-201ENST00000354547 KCNMB3Q9NPA1 279 aa21.52■■□□□ 1.04
COL13A1-201ENST00000354547 CLIC2O15247 247 aa21.52■■□□□ 1.04
COL13A1-201ENST00000354547 LRRC31Q6UY01 552 aa21.52■■□□□ 1.04
COL13A1-201ENST00000354547 REEP2Q9BRK0 252 aa21.52■■□□□ 1.04
COL13A1-201ENST00000354547 PJA2O43164 708 aa21.51■■□□□ 1.03
COL13A1-201ENST00000354547 MYBP10242 640 aa21.51■■□□□ 1.03
COL13A1-201ENST00000354547 MAPK8IP2Q13387 824 aaPredicted RBP21.51■■□□□ 1.03
COL13A1-201ENST00000354547 ASIC2Q16515 512 aa21.51■■□□□ 1.03
COL13A1-201ENST00000354547 CEP63Q96MT8 703 aa21.51■■□□□ 1.03
COL13A1-201ENST00000354547 SPAG5Q96R06 1193 aa21.51■■□□□ 1.03
COL13A1-201ENST00000354547 STIM2Q9P246 746 aa21.51■■□□□ 1.03
COL13A1-201ENST00000354547 HDAC9Q9UKV0 1011 aa21.51■■□□□ 1.03
COL13A1-201ENST00000354547 FAM86B1E9PN63 330 aa21.51■■□□□ 1.03
COL13A1-201ENST00000354547 TULP1O00294 542 aaPredicted RBP21.51■■□□□ 1.03
COL13A1-201ENST00000354547 FAM86B2P0C5J1 330 aa21.51■■□□□ 1.03
COL13A1-201ENST00000354547 SLC12A3P55017 1021 aa21.51■■□□□ 1.03
COL13A1-201ENST00000354547 ICA1Q05084 483 aa21.51■■□□□ 1.03
COL13A1-201ENST00000354547 DNM3Q9UQ16 869 aa21.51■■□□□ 1.03
COL13A1-201ENST00000354547 ADAMTSL1Q8N6G6 1762 aa21.51■■□□□ 1.03
COL13A1-201ENST00000354547 GOLGA6CA6NDK9 693 aa21.5■■□□□ 1.03
COL13A1-201ENST00000354547 GOLGA6DP0CG33 693 aa21.5■■□□□ 1.03
COL13A1-201ENST00000354547 KCNA1Q09470 495 aa21.5■■□□□ 1.03
COL13A1-201ENST00000354547 PROCA1Q8NCQ7 364 aaPredicted RBP21.5■■□□□ 1.03
COL13A1-201ENST00000354547 GOLGA6AQ9NYA3 693 aa21.5■■□□□ 1.03
COL13A1-201ENST00000354547 SPDYE3A6NKU9 549 aa21.5■■□□□ 1.03
COL13A1-201ENST00000354547 F5H6K3 240 aa21.5■■□□□ 1.03
COL13A1-201ENST00000354547 ZNF76P36508 570 aa21.5■■□□□ 1.03
COL13A1-201ENST00000354547 KLRC3Q07444 240 aa21.5■■□□□ 1.03
COL13A1-201ENST00000354547 CFAP221Q4G0U5 840 aa21.5■■□□□ 1.03
COL13A1-201ENST00000354547 TSEN2Q8NCE0 465 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms