RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 ECHS1P30084 290 aa12.52□□□□□ -0.4
CAPN9-202ENST00000354537 HSD17B3P37058 310 aa12.52□□□□□ -0.4
CAPN9-202ENST00000354537 NPEPPSP55786 919 aa12.52□□□□□ -0.4
CAPN9-202ENST00000354537 C16orf86Q6ZW13 317 aa12.52□□□□□ -0.4
CAPN9-202ENST00000354537 SEC14L1Q92503 715 aa12.52□□□□□ -0.4
CAPN9-202ENST00000354537 NYXQ9GZU5 481 aa12.52□□□□□ -0.4
CAPN9-202ENST00000354537 RABEP2Q9H5N1 569 aa12.52□□□□□ -0.4
CAPN9-202ENST00000354537 SLC12A6Q9UHW9 1150 aa12.52□□□□□ -0.4
CAPN9-202ENST00000354537 ESYT3A0FGR9 886 aa12.52□□□□□ -0.41
CAPN9-202ENST00000354537 TRAPPC3O43617 180 aa12.52□□□□□ -0.41
CAPN9-202ENST00000354537 KLRK1P26718 216 aa12.52□□□□□ -0.41
CAPN9-202ENST00000354537 MAP2K2P36507 400 aa12.52□□□□□ -0.41
CAPN9-202ENST00000354537 ERVK-9P63128 1117 aa12.52□□□□□ -0.41
CAPN9-202ENST00000354537 LACTB2Q53H82 288 aaPredicted RBP12.52□□□□□ -0.41
CAPN9-202ENST00000354537 CCDC65Q8IXS2 484 aa12.52□□□□□ -0.41
CAPN9-202ENST00000354537 RASGEF1CQ8N431 466 aa12.52□□□□□ -0.41
CAPN9-202ENST00000354537 SH3RF3Q8TEJ3 882 aaPredicted RBP12.52□□□□□ -0.41
CAPN9-202ENST00000354537 CYFIP2Q96F07 1278 aa12.52□□□□□ -0.41
CAPN9-202ENST00000354537 PANK4Q9NVE7 773 aa12.52□□□□□ -0.41
CAPN9-202ENST00000354537 BIN2Q9UBW5 565 aaPredicted RBP12.52□□□□□ -0.41
CAPN9-202ENST00000354537 FBXL5Q9UKA1 691 aa12.52□□□□□ -0.41
CAPN9-202ENST00000354537 ZNF831Q5JPB2 1677 aa12.52□□□□□ -0.41
CAPN9-202ENST00000354537 ZSCAN5CA6NGD5 496 aaPredicted RBP12.51□□□□□ -0.41
CAPN9-202ENST00000354537 TMCO5BA8MYB1 307 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 E7EVH7 732 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 PGRMC1O00264 195 aaKnown RBP12.51□□□□□ -0.41
CAPN9-202ENST00000354537 GCFC2P16383 781 aaKnown RBP12.51□□□□□ -0.41
CAPN9-202ENST00000354537 PRKCIP41743 596 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 ADCY7P51828 1080 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 CCDC121Q6ZUS5 278 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 SLFN11Q7Z7L1 901 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 LRRC57Q8N9N7 239 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.51□□□□□ -0.41
CAPN9-202ENST00000354537 KLC4Q9NSK0 619 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 PCDHA2Q9Y5H9 948 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 TNRC6CQ9HCJ0 1690 aaKnown RBP12.51□□□□□ -0.41
CAPN9-202ENST00000354537 MYO1FO00160 1098 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 GFPT2O94808 682 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 GOLGA8HP0CJ92 632 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 ZBTB48P10074 688 aaPredicted RBP12.51□□□□□ -0.41
CAPN9-202ENST00000354537 CDR1P51861 262 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 HDLBPQ00341 1268 aaKnown RBP12.51□□□□□ -0.41
CAPN9-202ENST00000354537 ATP2B2Q01814 1243 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 RAPGEF1Q13905 1077 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 PPP2R5EQ16537 467 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 CCDC26Q8TAB7 109 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 CENPTQ96BT3 561 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 PIGSQ96S52 555 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 EYA3Q99504 573 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.51□□□□□ -0.41
CAPN9-202ENST00000354537 CNOT10Q9H9A5 744 aaKnown RBP12.51□□□□□ -0.41
CAPN9-202ENST00000354537 FAM114A2Q9NRY5 505 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 TFCP2L1Q9NZI6 479 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 SUCLA2Q9P2R7 463 aaPredicted RBP12.51□□□□□ -0.41
CAPN9-202ENST00000354537 TTC7AQ9ULT0 858 aaPredicted RBP12.51□□□□□ -0.41
CAPN9-202ENST00000354537 NENFQ9UMX5 172 aa12.51□□□□□ -0.41
CAPN9-202ENST00000354537 DIS3Q9Y2L1 958 aaKnown RBP12.51□□□□□ -0.41
CAPN9-202ENST00000354537 KCNK3O14649 394 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 CDK8P49336 464 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 EIF3BP55884 814 aaKnown RBP12.5□□□□□ -0.41
CAPN9-202ENST00000354537 PPP2R2AP63151 447 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 ZNF844Q08AG5 666 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 LRRC41Q15345 812 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 RNF187Q5TA31 235 aaPredicted RBP12.5□□□□□ -0.41
CAPN9-202ENST00000354537 TMC4Q7Z404 712 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 IRF2BP2Q7Z5L9 587 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 FRMD5Q7Z6J6 570 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 CCDC13Q8IYE1 715 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 SYCE1Q8N0S2 351 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 NLRP3Q96P20 1036 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 KCTD10Q9H3F6 313 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 ADAMTS1Q9UHI8 967 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 NAV1Q8NEY1 1877 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 SNED1Q8TER0 1413 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 CETN3O15182 167 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 SLC37A4O43826 429 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 EDIL3O43854 480 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 GHRP10912 638 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 SEC24CP53992 1094 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 HLTFQ14527 1009 aaKnown RBP eCLIP12.5□□□□□ -0.41
CAPN9-202ENST00000354537 UAP1Q16222 522 aaPredicted RBP12.5□□□□□ -0.41
CAPN9-202ENST00000354537 ASPRV1Q53RT3 343 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 DPY19L2P1Q6NXN4 242 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 KLHL7Q8IXQ5 586 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 SWAP70Q9UH65 585 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 STXBP5LQ9Y2K9 1186 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 PITPNM2Q9BZ72 1349 aa12.5□□□□□ -0.41
CAPN9-202ENST00000354537 MYH14Q7Z406 1995 aaKnown RBP12.49□□□□□ -0.41
CAPN9-202ENST00000354537 A0A0G2JS52 829 aa12.49□□□□□ -0.41
CAPN9-202ENST00000354537 FRMD3A2A2Y4 597 aa12.49□□□□□ -0.41
CAPN9-202ENST00000354537 C21orf2O43822 256 aa12.49□□□□□ -0.41
CAPN9-202ENST00000354537 CCDC172P0C7W6 258 aa12.49□□□□□ -0.41
CAPN9-202ENST00000354537 CTNNA1P35221 906 aaKnown RBP12.49□□□□□ -0.41
CAPN9-202ENST00000354537 IFFO1Q0D2I5 559 aa12.49□□□□□ -0.41
CAPN9-202ENST00000354537 IFT88Q13099 833 aa12.49□□□□□ -0.41
CAPN9-202ENST00000354537 CLUL1Q15846 466 aa12.49□□□□□ -0.41
CAPN9-202ENST00000354537 WLSQ5T9L3 541 aa12.49□□□□□ -0.41
CAPN9-202ENST00000354537 C15orf52Q6ZUT6 534 aaKnown RBP12.49□□□□□ -0.41
CAPN9-202ENST00000354537 KCNK18Q7Z418 384 aa12.49□□□□□ -0.41
CAPN9-202ENST00000354537 CXorf56Q9H5V9 222 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms