RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CCDC105Q8IYK2 499 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 AGBL1Q96MI9 1066 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 RIOK1Q9BRS2 568 aaKnown RBP14.97□□□□□ -0.01
SMC6-201ENST00000351948 HESX1Q9UBX0 185 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 CAPN9O14815 690 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 GFPT2O94808 682 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 EEF1GP26641 437 aaKnown RBP14.97□□□□□ -0.01
SMC6-201ENST00000351948 BSPRYQ5W0U4 402 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 LXNQ9BS40 222 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 C3P01024 1663 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 ZNF157P51786 506 aaPredicted RBP14.97□□□□□ -0.01
SMC6-201ENST00000351948 SPZ1Q9BXG8 430 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 FAM204AQ9H8W3 233 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 RWDD2AQ9UIY3 292 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 ENC1O14682 589 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 LMNB1P20700 586 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 FMR1NBQ8N0W7 255 aaPredicted RBP14.97□□□□□ -0.01
SMC6-201ENST00000351948 CCDC51Q96ER9 411 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 VCPKMTQ9H867 229 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 SIGLEC1Q9BZZ2 1709 aa14.97□□□□□ -0.01
SMC6-201ENST00000351948 DDTLA6NHG4 134 aaPredicted RBP14.96□□□□□ -0.01
SMC6-201ENST00000351948 TLR3O15455 904 aaKnown RBP14.96□□□□□ -0.01
SMC6-201ENST00000351948 H2AFZP0C0S5 128 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 FDPSP14324 419 aaKnown RBP14.96□□□□□ -0.01
SMC6-201ENST00000351948 H2AFVQ71UI9 128 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 AKT1S1Q96B36 256 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 UBE2TQ9NPD8 197 aaPredicted RBP14.96□□□□□ -0.01
SMC6-201ENST00000351948 TXNDC16Q9P2K2 825 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 IKBKBO14920 756 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 RRP9O43818 475 aaKnown RBP14.96□□□□□ -0.01
SMC6-201ENST00000351948 DDNO94850 711 aaPredicted RBP14.96□□□□□ -0.01
SMC6-201ENST00000351948 YWHAEP62258 255 aaKnown RBP14.96□□□□□ -0.01
SMC6-201ENST00000351948 RNASELQ05823 741 aaKnown RBP14.96□□□□□ -0.01
SMC6-201ENST00000351948 USP49Q70CQ1 688 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 ENOX1Q8TC92 643 aaKnown RBP14.96□□□□□ -0.01
SMC6-201ENST00000351948 CACTINQ8WUQ7 758 aaKnown RBP14.96□□□□□ -0.01
SMC6-201ENST00000351948 LRRC45Q96CN5 670 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 MSTO1Q9BUK6 570 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 TMEM206Q9H813 350 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 NYAP2Q9P242 653 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 ATF7P17544 494 aaPredicted RBP14.96□□□□□ -0.01
SMC6-201ENST00000351948 MXI1P50539 228 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 UBR1Q8IWV7 1749 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 GRIN3BO60391 1043 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 CTDNEP1O95476 244 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 ARPP19P56211 112 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 ARID5BQ14865 1188 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 TAF1CQ15572 869 aaPredicted RBP14.96□□□□□ -0.01
SMC6-201ENST00000351948 CATSPER4Q7RTX7 472 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 ATG4CQ96DT6 458 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 SPATA33Q96N06 139 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 NAP1L3Q99457 506 aaPredicted RBP14.96□□□□□ -0.01
SMC6-201ENST00000351948 AMFRQ9UKV5 643 aa14.96□□□□□ -0.01
SMC6-201ENST00000351948 PRCPP42785 496 aa14.96□□□□□ -0.02
SMC6-201ENST00000351948 NSFP46459 744 aaKnown RBP14.96□□□□□ -0.02
SMC6-201ENST00000351948 JAK3P52333 1124 aa14.96□□□□□ -0.02
SMC6-201ENST00000351948 HUNKP57058 714 aa14.96□□□□□ -0.02
SMC6-201ENST00000351948 PTK2Q05397 1052 aa14.96□□□□□ -0.02
SMC6-201ENST00000351948 ARHGEF6Q15052 776 aa14.96□□□□□ -0.02
SMC6-201ENST00000351948 CEP55Q53EZ4 464 aa14.96□□□□□ -0.02
SMC6-201ENST00000351948 ATRIPQ8WXE1 791 aa14.96□□□□□ -0.02
SMC6-201ENST00000351948 RAD54LQ92698 747 aa14.96□□□□□ -0.02
SMC6-201ENST00000351948 FAM20AQ96MK3 541 aa14.96□□□□□ -0.02
SMC6-201ENST00000351948 JMJD4Q9H9V9 463 aa14.96□□□□□ -0.02
SMC6-201ENST00000351948 ZEB2O60315 1214 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 CYP27A1Q02318 531 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 KRT31Q15323 416 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 ZNF394Q53GI3 561 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 CFAP58Q5T655 872 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 TEX13BQ9BXU2 312 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 KCNK9Q9NPC2 374 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 TBC1D22BQ9NU19 505 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 NPHP3-ACAD11A0A0J9YXS1 232 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 GOLGA8SH3BPF8 625 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 SNX16P57768 344 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 LONRF2Q1L5Z9 754 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 PPP1R18Q6NYC8 613 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 KIAA1524Q8TCG1 905 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 ANKRD36BP1Q96IX9 119 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 RTFDC1Q9BY42 306 aaPredicted RBP14.95□□□□□ -0.02
SMC6-201ENST00000351948 SPTLC3Q9NUV7 552 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 FAM169AQ9Y6X4 670 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 THAP12O43422 761 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 QARSP47897 775 aaKnown RBP14.95□□□□□ -0.02
SMC6-201ENST00000351948 EHHADHQ08426 723 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 RHPN2Q8IUC4 686 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 AGBL3Q8NEM8 1001 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 EIF2AK1Q9BQI3 630 aaKnown RBP14.95□□□□□ -0.02
SMC6-201ENST00000351948 ALDH8A1Q9H2A2 487 aaPredicted RBP14.95□□□□□ -0.02
SMC6-201ENST00000351948 NDST4Q9H3R1 872 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 FZD1Q9UP38 647 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 TNPO2O14787 897 aaKnown RBP14.95□□□□□ -0.02
SMC6-201ENST00000351948 CELF2O95319 508 aaKnown RBP14.95□□□□□ -0.02
SMC6-201ENST00000351948 ZSCAN20P17040 1043 aaPredicted RBP14.95□□□□□ -0.02
SMC6-201ENST00000351948 MESDQ14696 234 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 UNC13DQ70J99 1090 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 RASGRP2Q7LDG7 609 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 ACRBPQ8NEB7 543 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 FAM149B1Q96BN6 582 aa14.95□□□□□ -0.02
SMC6-201ENST00000351948 PHF20Q9BVI0 1012 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms