RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 DDAH1O94760 285 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 ATICP31939 592 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 KLRC3Q07444 240 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 RHPN2Q8IUC4 686 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 KLHDC4Q8TBB5 520 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 CDK12Q9NYV4 1490 aaPredicted RBP9.22□□□□□ -0.93
HMGB1-203ENST00000341423 PGK1P00558 417 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 KRT9P35527 623 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 SETQ01105 290 aaPredicted RBP9.22□□□□□ -0.93
HMGB1-203ENST00000341423 KYAT1Q16773 422 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 TRIML1Q8N9V2 468 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 HLA-CQ95604 372 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 AHCYL2Q96HN2 611 aaKnown RBP9.22□□□□□ -0.93
HMGB1-203ENST00000341423 VCPKMTQ9H867 229 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 FAM8A1Q9UBU6 413 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 PLA2G4CQ9UP65 541 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 TTC41PQ6P2S7 1318 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 SLC9A3R1O14745 358 aaPredicted RBP9.22□□□□□ -0.93
HMGB1-203ENST00000341423 TTC31Q49AM3 519 aaPredicted RBP9.22□□□□□ -0.93
HMGB1-203ENST00000341423 TRPM4Q8TD43 1214 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 EDEM3Q9BZQ6 932 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 SPATC1LQ9H0A9 340 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 CCDC68Q9H2F9 335 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 CPDO75976 1380 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 LAG3P18627 525 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 OSTNP61366 133 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 TFAMQ00059 246 aaKnown RBP9.22□□□□□ -0.93
HMGB1-203ENST00000341423 LRRC32Q14392 662 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 LONRF3Q496Y0 759 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 ACBD5Q5T8D3 534 aaPredicted RBP9.22□□□□□ -0.93
HMGB1-203ENST00000341423 IQSEC1Q6DN90 963 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 KIAA1324Q6UXG2 1013 aaKnown RBP9.22□□□□□ -0.93
HMGB1-203ENST00000341423 CHD1LQ86WJ1 897 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 SH2B1Q9NRF2 756 aaPredicted RBP9.22□□□□□ -0.93
HMGB1-203ENST00000341423 AASDHPPTQ9NRN7 309 aa9.22□□□□□ -0.93
HMGB1-203ENST00000341423 MOXD2PA6NHM9 499 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 STAMBPO95630 424 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 BAATQ14032 418 aaPredicted RBP9.21□□□□□ -0.93
HMGB1-203ENST00000341423 CDCA7LQ96GN5 454 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 TCF25Q9BQ70 676 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 KMT5AQ9NQR1 393 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.21□□□□□ -0.93
HMGB1-203ENST00000341423 GOLGA8HP0CJ92 632 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 NPY2RP49146 381 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 DHPSP49366 369 aaPredicted RBP9.21□□□□□ -0.93
HMGB1-203ENST00000341423 GSE1Q14687 1217 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 PKN1Q16512 942 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 POMGNT1Q8WZA1 660 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 CCT6BQ92526 530 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 BRF1Q92994 677 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 MEIS3Q99687 375 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 VTA1Q9NP79 307 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 STAP2Q9UGK3 403 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 SLC25A13Q9UJS0 675 aa9.21□□□□□ -0.93
HMGB1-203ENST00000341423 CIAO1O76071 339 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 APOEP02649 317 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 PRKCZQ05513 592 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 PHKG1Q16816 387 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 HEATR6Q6AI08 1181 aaKnown RBP9.21□□□□□ -0.94
HMGB1-203ENST00000341423 DCUN1D2Q6PH85 259 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 MCPH1Q8NEM0 835 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 SMG7Q92540 1137 aaKnown RBP9.21□□□□□ -0.94
HMGB1-203ENST00000341423 GTPBP2Q9BX10 602 aaKnown RBP9.21□□□□□ -0.94
HMGB1-203ENST00000341423 FLT1P17948 1338 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 KDM3AQ9Y4C1 1321 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 CALUO43852 315 aaPredicted RBP9.21□□□□□ -0.94
HMGB1-203ENST00000341423 MAGEC1O60732 1142 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 RAB27AP51159 221 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 ACVR2BQ13705 512 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 OR6B3Q8NGW1 331 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 ATG4CQ96DT6 458 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 PRMT6Q96LA8 375 aaPredicted RBP9.21□□□□□ -0.94
HMGB1-203ENST00000341423 AFG3L2Q9Y4W6 797 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 IKBKGQ9Y6K9 419 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 GAKO14976 1311 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 UNCXA6NJT0 531 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 K7ENM7 598 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 PSMA7O14818 248 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 ALPPL2P10696 532 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 PPARGP37231 505 aaPredicted RBP9.21□□□□□ -0.94
HMGB1-203ENST00000341423 MTHFRP42898 656 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 ACRBPQ8NEB7 543 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 ARHGAP45Q92619 1136 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 FAM204AQ9H8W3 233 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 MAN1C1Q9NR34 630 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 KLHL3Q9UH77 587 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 PCDHA12Q9UN75 941 aa9.21□□□□□ -0.94
HMGB1-203ENST00000341423 M0QYT0 321 aa9.2□□□□□ -0.94
HMGB1-203ENST00000341423 CA4P22748 312 aa9.2□□□□□ -0.94
HMGB1-203ENST00000341423 GTF2H3Q13889 308 aa9.2□□□□□ -0.94
HMGB1-203ENST00000341423 SPATA18Q8TC71 538 aa9.2□□□□□ -0.94
HMGB1-203ENST00000341423 ASIC4Q96FT7 647 aa9.2□□□□□ -0.94
HMGB1-203ENST00000341423 TGS1Q96RS0 853 aaKnown RBP9.2□□□□□ -0.94
HMGB1-203ENST00000341423 TINF2Q9BSI4 451 aa9.2□□□□□ -0.94
HMGB1-203ENST00000341423 DISC1Q9NRI5 854 aa9.2□□□□□ -0.94
HMGB1-203ENST00000341423 CGNQ9P2M7 1197 aaKnown RBP9.2□□□□□ -0.94
HMGB1-203ENST00000341423 EDARQ9UNE0 448 aa9.2□□□□□ -0.94
HMGB1-203ENST00000341423 DAGLAQ9Y4D2 1042 aa9.2□□□□□ -0.94
HMGB1-203ENST00000341423 SYNMO15061 1565 aa9.2□□□□□ -0.94
HMGB1-203ENST00000341423 PITPNM2Q9BZ72 1349 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms