RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 CD163L1Q9NR16 1453 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 UBXN2AP68543 259 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 SDCCAG8Q86SQ7 713 aaPredicted RBP16.09■□□□□ 0.17
RRP1B-201ENST00000340648 ZNF446Q9NWS9 450 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 CEP170BQ9Y4F5 1589 aaPredicted RBP16.09■□□□□ 0.17
RRP1B-201ENST00000340648 LRRD1A4D1F6 860 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 PPP1R3GB7ZBB8 358 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 KRT14P02533 472 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 KCNB1Q14721 858 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 TAF11Q15544 211 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 C6orf118Q5T5N4 469 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 TRIM65Q6PJ69 517 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 ARHGEF18Q6ZSZ5 1173 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 SLC44A5Q8NCS7 719 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 TMEM47Q9BQJ4 181 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 PTPRUQ92729 1446 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 DEPDC5O75140 1603 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 LRRIQ3A6PVS8 624 aaPredicted RBP16.09■□□□□ 0.17
RRP1B-201ENST00000340648 KLK7P49862 253 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 GPATCH4Q5T3I0 446 aaKnown RBP16.09■□□□□ 0.17
RRP1B-201ENST00000340648 RSAD2Q8WXG1 361 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 VCX3BQ9H321 246 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 KANSL2Q9H9L4 492 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 EPB41L4AQ9HCS5 686 aaPredicted RBP16.09■□□□□ 0.17
RRP1B-201ENST00000340648 UBE2TQ9NPD8 197 aaPredicted RBP16.09■□□□□ 0.17
RRP1B-201ENST00000340648 DCP1AQ9NPI6 582 aaPredicted RBP16.09■□□□□ 0.17
RRP1B-201ENST00000340648 C1orf112Q9NSG2 853 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 TMEM260Q9NX78 707 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 FBXL5Q9UKA1 691 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 PIK3C2BO00750 1634 aa16.09■□□□□ 0.17
RRP1B-201ENST00000340648 MYOM1P52179 1685 aa16.08■□□□□ 0.17
RRP1B-201ENST00000340648 MYO1FO00160 1098 aa16.08■□□□□ 0.17
RRP1B-201ENST00000340648 CD44P16070 742 aaKnown RBP16.08■□□□□ 0.17
RRP1B-201ENST00000340648 PSMC4P43686 418 aa16.08■□□□□ 0.17
RRP1B-201ENST00000340648 ICA1Q05084 483 aa16.08■□□□□ 0.17
RRP1B-201ENST00000340648 ADCY2Q08462 1091 aa16.08■□□□□ 0.17
RRP1B-201ENST00000340648 KCNH2Q12809 1159 aa16.08■□□□□ 0.17
RRP1B-201ENST00000340648 PHLDB3Q6NSJ2 640 aa16.08■□□□□ 0.17
RRP1B-201ENST00000340648 PDXDC1Q6P996 788 aa16.08■□□□□ 0.17
RRP1B-201ENST00000340648 LRRC31Q6UY01 552 aa16.08■□□□□ 0.17
RRP1B-201ENST00000340648 PHLDB2Q86SQ0 1253 aa16.08■□□□□ 0.17
RRP1B-201ENST00000340648 RAD54LQ92698 747 aa16.08■□□□□ 0.17
RRP1B-201ENST00000340648 MAP3K14Q99558 947 aa16.08■□□□□ 0.17
RRP1B-201ENST00000340648 L1RE1Q9UN81 338 aa16.08■□□□□ 0.17
RRP1B-201ENST00000340648 CDHR2Q9BYE9 1310 aa16.08■□□□□ 0.17
RRP1B-201ENST00000340648 PVALEFA0A1B0GWK0 134 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 TTLL1O95922 423 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 CORO7P57737 925 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 COASYQ13057 564 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 KLC4Q9NSK0 619 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 ANAPC5Q9UJX4 755 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 TPX2Q9ULW0 747 aaKnown RBP16.08■□□□□ 0.16
RRP1B-201ENST00000340648 TMEM94Q12767 1356 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 GRID2IPA4D2P6 1211 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 SASH3O75995 380 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 PHBP35232 272 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 CERKLQ49MI3 558 aaPredicted RBP16.08■□□□□ 0.16
RRP1B-201ENST00000340648 NSMFQ6X4W1 530 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 TEKT1Q969V4 418 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 IWS1Q96ST2 819 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 RBM12Q9NTZ6 932 aaKnown RBP16.08■□□□□ 0.16
RRP1B-201ENST00000340648 SPATS2LQ9NUQ6 558 aaKnown RBP16.08■□□□□ 0.16
RRP1B-201ENST00000340648 LOC102724159A0A0B4J2E5 919 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 E9PMD0 336 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 HSPA6P17066 643 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 NSFP46459 744 aaKnown RBP16.08■□□□□ 0.16
RRP1B-201ENST00000340648 CDK8P49336 464 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 PWP2Q15269 919 aaKnown RBP16.08■□□□□ 0.16
RRP1B-201ENST00000340648 MAP7D1Q3KQU3 841 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 LGSNQ5TDP6 509 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 AP1ARQ63HQ0 302 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 PROM2Q8N271 834 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 BBOF1Q8ND07 529 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 CFAP61Q8NHU2 1237 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 THOC1Q96FV9 657 aaKnown RBP16.08■□□□□ 0.16
RRP1B-201ENST00000340648 SPZ1Q9BXG8 430 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 FRMPD1Q5SYB0 1578 aa16.08■□□□□ 0.16
RRP1B-201ENST00000340648 ARHGAP42A6NI28 874 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 hCG_1984214I3L0E3 225 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 SMIM24O75264 130 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 MAPK4P31152 587 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 ZNF211Q13398 564 aaPredicted RBP16.07■□□□□ 0.16
RRP1B-201ENST00000340648 RSRC2Q7L4I2 434 aaKnown RBP16.07■□□□□ 0.16
RRP1B-201ENST00000340648 STAG2Q8N3U4 1231 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 ZNF713Q8N859 430 aaPredicted RBP16.07■□□□□ 0.16
RRP1B-201ENST00000340648 ZNF473Q8WTR7 871 aaKnown RBP16.07■□□□□ 0.16
RRP1B-201ENST00000340648 AMNQ9BXJ7 453 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 AZI2Q9H6S1 392 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 SFI1A8K8P3 1242 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 ANKRD35Q8N283 1001 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 TRIM9Q9C026 710 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 EPN3Q9H201 632 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 COMMD10Q9Y6G5 202 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 ABCA9Q8IUA7 1624 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 GAP43P17677 238 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 FAM98CQ17RN3 349 aaKnown RBP16.07■□□□□ 0.16
RRP1B-201ENST00000340648 PARP9Q8IXQ6 854 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 SH3RF3Q8TEJ3 882 aaPredicted RBP16.07■□□□□ 0.16
RRP1B-201ENST00000340648 MLXIPLQ9NP71 852 aa16.07■□□□□ 0.16
RRP1B-201ENST00000340648 NOC2LQ9Y3T9 749 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms