RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 CNKSR2Q8WXI2 1034 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 CCDC42Q96M95 316 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 PCIF1Q9H4Z3 704 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 IPO5O00410 1097 aaKnown RBP11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 VCAM1P19320 739 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 MATR3P43243 847 aaKnown RBP eCLIP11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 NOVP48745 357 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 DNM2P50570 870 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 POLR2FP61218 127 aaKnown RBP11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 ARHGEF16Q5VV41 709 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 SNRNP48Q6IEG0 339 aaKnown RBP11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 NEK11Q8NG66 645 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 SLC16A10Q8TF71 515 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 TAAR1Q96RJ0 339 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 MRIQ9BWK5 157 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 THAP9Q9H5L6 903 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 ADGRG1Q9Y653 693 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 CEP55Q53EZ4 464 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 EHMT1Q9H9B1 1298 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 KIF2AO00139 706 aaPredicted RBP11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 SREBF1P36956 1147 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 MRPS25P82663 173 aaKnown RBP11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 RMDN3Q96TC7 470 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 LXNQ9BS40 222 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 LRRC27Q9C0I9 530 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 MAGEF1Q9HAY2 307 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 COL20A1Q9P218 1284 aa11.25□□□□□ -0.61
RBFOX1-202ENST00000340209 RHOXF2BP0C7M4 288 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 PNMA6AP0CW24 399 aaPredicted RBP11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 RPS6P62753 249 aaKnown RBP11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 ODR4Q5SWX8 454 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 MOB2Q70IA6 237 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 PRPF38AQ8NAV1 312 aaKnown RBP11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 MTMR8Q96EF0 704 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 TRERF1Q96PN7 1200 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 RHOXF2Q9BQY4 288 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 EPN1Q9Y6I3 576 aaPredicted RBP11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 MYH7BA7E2Y1 1941 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 ZBED4O75132 1171 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 ACTN1P12814 892 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 SPA17Q15506 151 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 KCTD19Q17RG1 926 aaPredicted RBP11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 GADL1Q6ZQY3 521 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 ETNPPLQ8TBG4 499 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 UNC45AQ9H3U1 944 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 KCNMB3Q9NPA1 279 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 RNF181Q9P0P0 153 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 HDAC6Q9UBN7 1215 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 FEM1BQ9UK73 627 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 DLEC1Q9Y238 1755 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 C10orf71Q711Q0 1435 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 USP8P40818 1118 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 SOX10P56693 466 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 BAATQ14032 418 aaPredicted RBP11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 TMEM119Q4V9L6 283 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 VWA3BQ502W6 1294 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 PLA2G4FQ68DD2 849 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 ELMO3Q96BJ8 720 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 DNAJC19Q96DA6 116 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 TEKT3Q9BXF9 490 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 RNF146Q9NTX7 359 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 DUSP10Q9Y6W6 482 aa11.24□□□□□ -0.61
RBFOX1-202ENST00000340209 CCDC169A6NNP5 214 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 RBAK-RBAKDNI3L0D1 243 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 BACH1O14867 736 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 CETN3O15182 167 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 SRGAP2O75044 1071 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 RNASE9P60153 205 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 TGFB2P61812 414 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 COG2Q14746 738 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 TMTC1Q8IUR5 882 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 SPAG5Q96R06 1193 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 NAP1L4Q99733 375 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 JADE2Q9NQC1 790 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 FGFR1OPO95684 399 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 PPP2R3AQ06190 1150 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 UBE2Q2Q8WVN8 375 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 PANX2Q96RD6 677 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 RIPK3Q9Y572 518 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 COL4A3BPQ9Y5P4 624 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 ATRNL1Q5VV63 1379 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 LRRC53A6NM62 1247 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 TMCO5BA8MYB1 307 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 FANCGO15287 622 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 BUB1O43683 1085 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 NDUFA10O95299 355 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 MYL1P05976 194 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 CASP4P49662 377 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 PRELPP51888 382 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 FKBP3Q00688 224 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 ARSHQ5FYA8 562 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 RNF207Q6ZRF8 634 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 FAM160B2Q86V87 743 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 FAM178BQ8IXR5 827 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 GUF1Q8N442 669 aaKnown RBP11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 SCFD1Q8WVM8 642 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 LENG9Q96B70 501 aa11.23□□□□□ -0.61
RBFOX1-202ENST00000340209 GPRC5CQ9NQ84 441 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms