RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 UBE3BQ7Z3V4 1068 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 MICU3Q86XE3 530 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 AFAP1L2Q8N4X5 818 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 KIF14Q15058 1648 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 TTC21BQ7Z4L5 1316 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 SPOPO43791 374 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 EPB41P11171 864 aaKnown RBP13.6□□□□□ -0.23
BRPF3-201ENST00000339717 PDCD4Q53EL6 469 aaKnown RBP13.6□□□□□ -0.23
BRPF3-201ENST00000339717 CENPUQ71F23 418 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 RRAGAQ7L523 313 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 OTUD6AQ7L8S5 288 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 SPATA4Q8NEY3 305 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 CEP19Q96LK0 163 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 WARS2Q9UGM6 360 aaKnown RBP13.6□□□□□ -0.23
BRPF3-201ENST00000339717 BARX2Q9UMQ3 279 aaPredicted RBP13.6□□□□□ -0.23
BRPF3-201ENST00000339717 ASNA1O43681 348 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 TTC4O95801 387 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 PLTPP55058 493 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 NOP9Q86U38 636 aaKnown RBP13.6□□□□□ -0.23
BRPF3-201ENST00000339717 SLC26A4O43511 780 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 ORC4O43929 436 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 MAN1A1P33908 653 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 PLEKHO1Q53GL0 409 aaPredicted RBP13.6□□□□□ -0.23
BRPF3-201ENST00000339717 SDCCAG3Q96C92 435 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 ATP6V1HQ9UI12 483 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 PCDHGC5Q9Y5F6 944 aa13.6□□□□□ -0.23
BRPF3-201ENST00000339717 GPC6Q9Y625 555 aaPredicted RBP13.6□□□□□ -0.23
BRPF3-201ENST00000339717 CDK13Q14004 1512 aaKnown RBP13.59□□□□□ -0.23
BRPF3-201ENST00000339717 PITPNM2Q9BZ72 1349 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 F8VZ95 297 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 CAPN9O14815 690 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 PER1O15534 1290 aaPredicted RBP13.59□□□□□ -0.23
BRPF3-201ENST00000339717 SRGAP2O75044 1071 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 FOSL1P15407 271 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 C21orf59P57076 290 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 USP46P62068 366 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 MARK2Q7KZI7 788 aaKnown RBP13.59□□□□□ -0.23
BRPF3-201ENST00000339717 C11orf74Q86VG3 221 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 DQX1Q8TE96 717 aaKnown RBP13.59□□□□□ -0.23
BRPF3-201ENST00000339717 PPWD1Q96BP3 646 aaKnown RBP13.59□□□□□ -0.23
BRPF3-201ENST00000339717 MMS19Q96T76 1030 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 PCDHA5Q9Y5H7 936 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 A0A1B0GW55 424 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 JAK2O60674 1132 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 DUX4L2P0CJ85 424 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 DUX4L3P0CJ86 424 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 DUX4L4P0CJ87 422 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 DUX4L5P0CJ88 424 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 DUX4L6P0CJ89 424 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 DUX4L7P0CJ90 424 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 XRCC4Q13426 336 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 PDAP1Q13442 181 aaKnown RBP13.59□□□□□ -0.23
BRPF3-201ENST00000339717 RGS21Q2M5E4 152 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 TMEM67Q5HYA8 995 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 TXNDC16Q9P2K2 825 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 DUX4Q9UBX2 424 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 DNAJC5BQ9UF47 199 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 TRIM17Q9Y577 477 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 CDC25CP30307 473 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 PPP1R15BQ5SWA1 713 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 USP37Q86T82 979 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 RNPEPL1Q9HAU8 725 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 ATPIF1Q9UII2 106 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 EME2A4GXA9 379 aaPredicted RBP13.59□□□□□ -0.23
BRPF3-201ENST00000339717 SNTNA6NMZ2 147 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 AREL1O15033 823 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 VDRP11473 427 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 SLCO1A2P46721 670 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 RSBN1LQ6PCB5 846 aaPredicted RBP13.59□□□□□ -0.23
BRPF3-201ENST00000339717 C1orf228Q6PIY5 440 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 RASGRP2Q7LDG7 609 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 RAPGEF5Q92565 580 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 POLR3EQ9NVU0 708 aa13.59□□□□□ -0.23
BRPF3-201ENST00000339717 TCP11X1B4DZS4 312 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 MBD4O95243 580 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 CDH3P22223 829 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 MXI1P50539 228 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 PEX5P50542 639 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 STK4Q13043 487 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 CADPS2Q86UW7 1296 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 ANKLE2Q86XL3 938 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 TCAIMQ8N3R3 496 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 NOA1Q8NC60 698 aaKnown RBP13.58□□□□□ -0.24
BRPF3-201ENST00000339717 CNBD2Q96M20 576 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 PRMT1Q99873 361 aaKnown RBP13.58□□□□□ -0.24
BRPF3-201ENST00000339717 CCDC8Q9H0W5 538 aaPredicted RBP13.58□□□□□ -0.24
BRPF3-201ENST00000339717 AZI2Q9H6S1 392 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 WDR35Q9P2L0 1181 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 EEF1GP26641 437 aaKnown RBP13.58□□□□□ -0.24
BRPF3-201ENST00000339717 LRPAP1P30533 357 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 WTAPQ15007 396 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 ZNF394Q53GI3 561 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 RABGAP1LQ5R372 815 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 ABTB2Q8N961 1025 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 MRRFQ96E11 262 aaKnown RBP13.58□□□□□ -0.24
BRPF3-201ENST00000339717 PAWRQ96IZ0 340 aaKnown RBP13.58□□□□□ -0.24
BRPF3-201ENST00000339717 ZCWPW1Q9H0M4 648 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 SERTAD1Q9UHV2 236 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 SESN1Q9Y6P5 492 aa13.58□□□□□ -0.24
BRPF3-201ENST00000339717 SPDYE3A6NKU9 549 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms