RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 RPUSD2Q8IZ73 545 aaKnown RBP8.39□□□□□ -1.07
TRIM2-201ENST00000338700 PCIF1Q9H4Z3 704 aa8.39□□□□□ -1.07
TRIM2-201ENST00000338700 RPF1Q9H9Y2 349 aaKnown RBP8.39□□□□□ -1.07
TRIM2-201ENST00000338700 S100BP04271 92 aaPredicted RBP8.38□□□□□ -1.07
TRIM2-201ENST00000338700 PLA2G4BP0C869 781 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 EIF2AK2P19525 551 aaKnown RBP8.38□□□□□ -1.07
TRIM2-201ENST00000338700 GPSM2P81274 684 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 TEX2Q8IWB9 1127 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 STAG1Q8WVM7 1258 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 GCNAQ96QF7 691 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 BCAP29Q9UHQ4 241 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 MINPP1Q9UNW1 487 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 EPN1Q9Y6I3 576 aaPredicted RBP8.38□□□□□ -1.07
TRIM2-201ENST00000338700 PHLPP2Q6ZVD8 1323 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 RNF40O75150 1001 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 KRT10P13645 584 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 HUNKP57058 714 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 ANKRD20A3Q5VUR7 823 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 TTBK2Q6IQ55 1244 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 ARHGEF2Q92974 986 aaKnown RBP8.38□□□□□ -1.07
TRIM2-201ENST00000338700 DESI2Q9BSY9 194 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 KIF9Q9HAQ2 790 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 CPDO75976 1380 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 LRRC7Q96NW7 1537 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 A0A1B0GUA9 196 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 USP17L5A8MUK1 530 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 MCAMP43121 646 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 FKBP3Q00688 224 aaKnown RBP8.38□□□□□ -1.07
TRIM2-201ENST00000338700 LRRC41Q15345 812 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 SLFN12LQ6IEE8 588 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 PRR5LQ6MZQ0 368 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 VCXQ9H320 206 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 CLIC2O15247 247 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 PPFIA4O75335 1185 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 SLFN14P0C7P3 912 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 MAPK4P31152 587 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 GUCY2FP51841 1108 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 CACNB1Q02641 598 aaPredicted RBP8.38□□□□□ -1.07
TRIM2-201ENST00000338700 MESDQ14696 234 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 BRD3Q15059 726 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 FAM167AQ96KS9 214 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 LBHD1Q9BQE6 289 aaPredicted RBP8.38□□□□□ -1.07
TRIM2-201ENST00000338700 VCX3BQ9H321 246 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 CPSF3Q9UKF6 684 aaKnown RBP8.38□□□□□ -1.07
TRIM2-201ENST00000338700 PCDHA5Q9Y5H7 936 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 ESYT2A0FGR8 921 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 RPS12P25398 132 aaKnown RBP8.38□□□□□ -1.07
TRIM2-201ENST00000338700 HOXA13P31271 388 aaPredicted RBP8.38□□□□□ -1.07
TRIM2-201ENST00000338700 ANKRD42Q8N9B4 389 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 FAM149B1Q96BN6 582 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 ZNF653Q96CK0 615 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 RAB3IPQ96QF0 476 aaPredicted RBP8.38□□□□□ -1.07
TRIM2-201ENST00000338700 EMILIN3Q9NT22 766 aa8.38□□□□□ -1.07
TRIM2-201ENST00000338700 CDC25BP30305 580 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 VPS41P49754 854 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 ARPP19P56211 112 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 STXBP2Q15833 593 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 ARMCX2Q7L311 632 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 LRRC4Q9HBW1 653 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 MRPL47Q9HD33 250 aaKnown RBP8.37□□□□□ -1.07
TRIM2-201ENST00000338700 CD209Q9NNX6 404 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 RWDD2AQ9UIY3 292 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 SRPRBQ9Y5M8 271 aaKnown RBP8.37□□□□□ -1.07
TRIM2-201ENST00000338700 OTUD5Q96G74 571 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 RSRC1Q96IZ7 334 aaKnown RBP8.37□□□□□ -1.07
TRIM2-201ENST00000338700 STRBPQ96SI9 672 aaKnown RBP8.37□□□□□ -1.07
TRIM2-201ENST00000338700 RRAGDQ9NQL2 400 aaPredicted RBP8.37□□□□□ -1.07
TRIM2-201ENST00000338700 RASSF7Q02833 373 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 ARL6IP4Q66PJ3 421 aaKnown RBP8.37□□□□□ -1.07
TRIM2-201ENST00000338700 ZNF449Q6P9G9 518 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 RYBPQ8N488 228 aaPredicted RBP8.37□□□□□ -1.07
TRIM2-201ENST00000338700 MGARPQ8TDB4 240 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 NUF2Q9BZD4 464 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 DPH5Q9H2P9 285 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 PLEKHA4Q9H4M7 779 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 THAP9Q9H5L6 903 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 HOMER3Q9NSC5 361 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 MAN1B1Q9UKM7 699 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 ZHX2Q9Y6X8 837 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 SGK1O00141 431 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 LDHAP00338 332 aaKnown RBP8.37□□□□□ -1.07
TRIM2-201ENST00000338700 ELF1P32519 619 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 ARL4AP40617 200 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 SNAP25P60880 206 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 FAM83BQ5T0W9 1011 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 C17orf53Q8N3J3 647 aaPredicted RBP8.37□□□□□ -1.07
TRIM2-201ENST00000338700 MAD1L1Q9Y6D9 718 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 SRGAP2CP0DJJ0 459 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 MARK3P27448 753 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 NR5A1Q13285 461 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 PTPROQ16827 1216 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 PPP4R3CPQ6ZMV5 832 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 POTEDQ86YR6 584 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 LRRC8AQ8IWT6 810 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 SIX6OS1Q8N1H7 587 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 MYRIPQ8NFW9 859 aa8.37□□□□□ -1.07
TRIM2-201ENST00000338700 GOLGA8KD6RF30 607 aa8.36□□□□□ -1.07
TRIM2-201ENST00000338700 IKBKBO14920 756 aa8.36□□□□□ -1.07
TRIM2-201ENST00000338700 GSTA1P08263 222 aa8.36□□□□□ -1.07
TRIM2-201ENST00000338700 GSTA2P09210 222 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms