RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 TNRC18O15417 2968 aaPredicted RBP17.34■□□□□ 0.37
SEC13-201ENST00000337354 GSTTP1A0A1W2PQM5 241 aa17.34■□□□□ 0.37
SEC13-201ENST00000337354 WDR64B1ANS9 1081 aa17.34■□□□□ 0.37
SEC13-201ENST00000337354 SORBS3O60504 671 aa17.34■□□□□ 0.37
SEC13-201ENST00000337354 TCF7P36402 384 aaPredicted RBP17.34■□□□□ 0.37
SEC13-201ENST00000337354 PRPHP41219 470 aa17.34■□□□□ 0.37
SEC13-201ENST00000337354 TXKP42681 527 aa17.34■□□□□ 0.37
SEC13-201ENST00000337354 MNX1P50219 401 aaPredicted RBP17.34■□□□□ 0.37
SEC13-201ENST00000337354 JAK3P52333 1124 aa17.34■□□□□ 0.37
SEC13-201ENST00000337354 IRX5P78411 483 aaPredicted RBP17.34■□□□□ 0.37
SEC13-201ENST00000337354 PURAQ00577 322 aaKnown RBP17.34■□□□□ 0.37
SEC13-201ENST00000337354 SP4Q02446 784 aa17.34■□□□□ 0.37
SEC13-201ENST00000337354 NBR1Q14596 966 aa17.34■□□□□ 0.37
SEC13-201ENST00000337354 ARL6IP4Q66PJ3 421 aaKnown RBP17.34■□□□□ 0.37
SEC13-201ENST00000337354 MIS18BP1Q6P0N0 1132 aa17.34■□□□□ 0.37
SEC13-201ENST00000337354 ABHD15Q6UXT9 468 aa17.34■□□□□ 0.37
SEC13-201ENST00000337354 NECAB2Q7Z6G3 386 aa17.34■□□□□ 0.37
SEC13-201ENST00000337354 MTG1Q9BT17 334 aaPredicted RBP17.34■□□□□ 0.37
SEC13-201ENST00000337354 SEZ6LQ9BYH1 1024 aa17.34■□□□□ 0.37
SEC13-201ENST00000337354 TMEM60Q9H2L4 133 aa17.34■□□□□ 0.37
SEC13-201ENST00000337354 TTC12Q9H892 705 aaPredicted RBP17.34■□□□□ 0.37
SEC13-201ENST00000337354 ZDHHC9Q9Y397 364 aa17.34■□□□□ 0.37
SEC13-201ENST00000337354 PCDHA10Q9Y5I2 948 aa17.34■□□□□ 0.37
SEC13-201ENST00000337354 DDX39AO00148 427 aaKnown RBP17.33■□□□□ 0.36
SEC13-201ENST00000337354 CCNE2O96020 404 aa17.33■□□□□ 0.36
SEC13-201ENST00000337354 MYL3P08590 195 aa17.33■□□□□ 0.36
SEC13-201ENST00000337354 COL6A1P12109 1028 aa17.33■□□□□ 0.36
SEC13-201ENST00000337354 ATP2C1P98194 919 aaPredicted RBP17.33■□□□□ 0.36
SEC13-201ENST00000337354 SF3A1Q15459 793 aaKnown RBP17.33■□□□□ 0.36
SEC13-201ENST00000337354 FAM173BQ6P4H8 233 aa17.33■□□□□ 0.36
SEC13-201ENST00000337354 CXCL17Q6UXB2 119 aa17.33■□□□□ 0.36
SEC13-201ENST00000337354 DIS3LQ8TF46 1054 aaKnown RBP17.33■□□□□ 0.36
SEC13-201ENST00000337354 GJA10Q969M2 543 aa17.33■□□□□ 0.36
SEC13-201ENST00000337354 UIMC1Q96RL1 719 aa17.33■□□□□ 0.36
SEC13-201ENST00000337354 KATNAL1Q9BW62 490 aa17.33■□□□□ 0.36
SEC13-201ENST00000337354 SMARCAD1Q9H4L7 1026 aa17.33■□□□□ 0.36
SEC13-201ENST00000337354 C11orf49Q9H6J7 331 aa17.33■□□□□ 0.36
SEC13-201ENST00000337354 AZI2Q9H6S1 392 aa17.33■□□□□ 0.36
SEC13-201ENST00000337354 DISC1Q9NRI5 854 aa17.33■□□□□ 0.36
SEC13-201ENST00000337354 CFAP45Q9UL16 551 aa17.33■□□□□ 0.36
SEC13-201ENST00000337354 IGKV6D-21A0A0A0MT36 114 aa17.32■□□□□ 0.36
SEC13-201ENST00000337354 PSAPP07602 524 aa17.32■□□□□ 0.36
SEC13-201ENST00000337354 SLC26A2P50443 739 aa17.32■□□□□ 0.36
SEC13-201ENST00000337354 PDIA5Q14554 519 aa17.32■□□□□ 0.36
SEC13-201ENST00000337354 TMEM266Q2M3C6 531 aa17.32■□□□□ 0.36
SEC13-201ENST00000337354 FOXD4L5Q5VV16 416 aaPredicted RBP17.32■□□□□ 0.36
SEC13-201ENST00000337354 DTHD1Q6ZMT9 781 aa17.32■□□□□ 0.36
SEC13-201ENST00000337354 PLPPR4Q7Z2D5 763 aa17.32■□□□□ 0.36
SEC13-201ENST00000337354 FOXD4L4Q8WXT5 416 aaPredicted RBP17.32■□□□□ 0.36
SEC13-201ENST00000337354 TNPO1Q92973 898 aaKnown RBP17.32■□□□□ 0.36
SEC13-201ENST00000337354 PAWRQ96IZ0 340 aaKnown RBP17.32■□□□□ 0.36
SEC13-201ENST00000337354 C16orf70Q9BSU1 422 aa17.32■□□□□ 0.36
SEC13-201ENST00000337354 RAB34Q9BZG1 259 aa17.32■□□□□ 0.36
SEC13-201ENST00000337354 SENP6Q9GZR1 1112 aaPredicted RBP17.32■□□□□ 0.36
SEC13-201ENST00000337354 UNC45AQ9H3U1 944 aa17.32■□□□□ 0.36
SEC13-201ENST00000337354 VAV3Q9UKW4 847 aa17.32■□□□□ 0.36
SEC13-201ENST00000337354 ZNF215Q9UL58 517 aaPredicted RBP17.32■□□□□ 0.36
SEC13-201ENST00000337354 SAMM50Q9Y512 469 aa17.32■□□□□ 0.36
SEC13-201ENST00000337354 MORC2Q9Y6X9 1032 aaPredicted RBP17.32■□□□□ 0.36
SEC13-201ENST00000337354 H3BRB1 525 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 LGR5O75473 907 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 F2P00734 622 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 LGALS2P05162 132 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 SUPT20HL2P0C7V6 817 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 FXR2P51116 673 aaKnown RBP eCLIP17.31■□□□□ 0.36
SEC13-201ENST00000337354 STAT5BP51692 787 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 SPIRE1Q08AE8 756 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 EPHA7Q15375 998 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 FAM160B1Q5W0V3 765 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 MIER3Q7Z3K6 550 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 UBE2Q1Q7Z7E8 422 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 VTI1AQ96AJ9 217 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 HTATIP2Q9BUP3 242 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 TUT1Q9H6E5 874 aaKnown RBP17.31■□□□□ 0.36
SEC13-201ENST00000337354 STARD7Q9NQZ5 370 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 STK24Q9Y6E0 443 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 EMSYQ7Z589 1322 aa17.31■□□□□ 0.36
SEC13-201ENST00000337354 A0A1W2PQ45 241 aaPredicted RBP17.3■□□□□ 0.36
SEC13-201ENST00000337354 A0A1W2PQY0 241 aa17.3■□□□□ 0.36
SEC13-201ENST00000337354 TECP42680 631 aa17.3■□□□□ 0.36
SEC13-201ENST00000337354 UTP14CQ5TAP6 766 aaKnown RBP17.3■□□□□ 0.36
SEC13-201ENST00000337354 C1orf53Q5VUE5 145 aa17.3■□□□□ 0.36
SEC13-201ENST00000337354 SWSAP1Q6NVH7 229 aa17.3■□□□□ 0.36
SEC13-201ENST00000337354 AFAP1L1Q8TED9 768 aa17.3■□□□□ 0.36
SEC13-201ENST00000337354 GLG1Q92896 1179 aa17.3■□□□□ 0.36
SEC13-201ENST00000337354 USP28Q96RU2 1077 aa17.3■□□□□ 0.36
SEC13-201ENST00000337354 ERAP1Q9NZ08 941 aa17.3■□□□□ 0.36
SEC13-201ENST00000337354 TELO2Q9Y4R8 837 aa17.3■□□□□ 0.36
SEC13-201ENST00000337354 CLIC4Q9Y696 253 aa17.3■□□□□ 0.36
SEC13-201ENST00000337354 HAS3O00219 553 aa17.29■□□□□ 0.36
SEC13-201ENST00000337354 BACH1O14867 736 aa17.29■□□□□ 0.36
SEC13-201ENST00000337354 CHMP2AO43633 222 aa17.29■□□□□ 0.36
SEC13-201ENST00000337354 DKC1O60832 514 aaKnown RBP eCLIP17.29■□□□□ 0.36
SEC13-201ENST00000337354 NASPP49321 788 aaPredicted RBP17.29■□□□□ 0.36
SEC13-201ENST00000337354 SLC39A14Q15043 492 aa17.29■□□□□ 0.36
SEC13-201ENST00000337354 PTPAQ15257 358 aa17.29■□□□□ 0.36
SEC13-201ENST00000337354 KAT2BQ92831 832 aa17.29■□□□□ 0.36
SEC13-201ENST00000337354 FERMT2Q96AC1 680 aa17.29■□□□□ 0.36
SEC13-201ENST00000337354 ZNF302Q9NR11 478 aa17.29■□□□□ 0.36
SEC13-201ENST00000337354 CHMP5Q9NZZ3 219 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms