RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 hCG_1984214I3L0E3 225 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 PDE2AO00408 941 aaPredicted RBP9.79□□□□□ -0.84
SNCA-201ENST00000336904 GCNT3O95395 438 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 MYL1P05976 194 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 ARP10275 920 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 NR2F2P24468 414 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 ZBED6P86452 979 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 PPARDQ03181 441 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 ADAM9Q13443 819 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 RAPGEF1Q13905 1077 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 PRKG1Q13976 671 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 DLK2Q6UY11 383 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 GUF1Q8N442 669 aaKnown RBP9.79□□□□□ -0.84
SNCA-201ENST00000336904 ZNF713Q8N859 430 aaPredicted RBP9.79□□□□□ -0.84
SNCA-201ENST00000336904 FAM133AQ8N9E0 248 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 CAGE1Q8TC20 777 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 DYDC2Q96IM9 177 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 IFIH1Q9BYX4 1025 aaKnown RBP9.79□□□□□ -0.84
SNCA-201ENST00000336904 PCDHB13Q9Y5F0 798 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 A0A1W2PQC6 194 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 TISP43B9A030 160 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 IPO7O95373 1038 aaKnown RBP9.79□□□□□ -0.84
SNCA-201ENST00000336904 TBC1D8O95759 1140 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 KIF11P52732 1056 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 TRIM14Q14142 442 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 MAN2A1Q16706 1144 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 RSBN1LQ6PCB5 846 aaPredicted RBP9.79□□□□□ -0.84
SNCA-201ENST00000336904 FAM114A1Q8IWE2 563 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 TTLL6Q8N841 843 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 PROCA1Q8NCQ7 364 aaPredicted RBP9.79□□□□□ -0.84
SNCA-201ENST00000336904 IL31RAQ8NI17 732 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 TSG101Q99816 390 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 PACSIN1Q9BY11 444 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 MAGEF1Q9HAY2 307 aa9.79□□□□□ -0.84
SNCA-201ENST00000336904 PEX10O60683 326 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 N4BP1O75113 896 aaKnown RBP9.78□□□□□ -0.84
SNCA-201ENST00000336904 SLC9A1P19634 815 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 INPP5BP32019 993 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 HOXD13P35453 343 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 EPS15P42566 896 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 SLC12A3P55017 1021 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 ZNF772Q68DY9 489 aaPredicted RBP9.78□□□□□ -0.84
SNCA-201ENST00000336904 PPP1R18Q6NYC8 613 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 NFRKBQ6P4R8 1299 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 MKL1Q969V6 931 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 EIF2AK1Q9BQI3 630 aaKnown RBP9.78□□□□□ -0.84
SNCA-201ENST00000336904 ZNF341Q9BYN7 854 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 COL4A3BPQ9Y5P4 624 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 CNTNAP1P78357 1384 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 PVALEFA0A1B0GWK0 134 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 NFIBO00712 420 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 SP4Q02446 784 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 EHHADHQ08426 723 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 GIT2Q14161 759 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 SAMD7Q7Z3H4 446 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 CCDC65Q8IXS2 484 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 FLAD1Q8NFF5 587 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 NEK11Q8NG66 645 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 COG1Q8WTW3 980 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 ABCB6Q9NP58 842 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 ARGLU1Q9NWB6 273 aaPredicted RBP9.78□□□□□ -0.84
SNCA-201ENST00000336904 RGS17Q9UGC6 210 aaPredicted RBP9.78□□□□□ -0.84
SNCA-201ENST00000336904 AJAP1Q9UKB5 411 aaPredicted RBP9.78□□□□□ -0.84
SNCA-201ENST00000336904 DNM3Q9UQ16 869 aa9.78□□□□□ -0.84
SNCA-201ENST00000336904 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.78□□□□□ -0.84
SNCA-201ENST00000336904 CTAGE15A4D2H0 777 aa9.77□□□□□ -0.84
SNCA-201ENST00000336904 TLR2O60603 784 aa9.77□□□□□ -0.84
SNCA-201ENST00000336904 CTAGE8P0CG41 777 aa9.77□□□□□ -0.84
SNCA-201ENST00000336904 FECHP22830 423 aa9.77□□□□□ -0.84
SNCA-201ENST00000336904 CYLC1P35663 651 aaPredicted RBP9.77□□□□□ -0.84
SNCA-201ENST00000336904 SPA17Q15506 151 aa9.77□□□□□ -0.84
SNCA-201ENST00000336904 LRCH2Q5VUJ6 765 aa9.77□□□□□ -0.84
SNCA-201ENST00000336904 CTAGE6Q86UF2 777 aa9.77□□□□□ -0.84
SNCA-201ENST00000336904 CTAGE4Q8IX94 777 aa9.77□□□□□ -0.84
SNCA-201ENST00000336904 MS4A14Q96JA4 679 aa9.77□□□□□ -0.84
SNCA-201ENST00000336904 FAM84AQ96KN4 292 aa9.77□□□□□ -0.84
SNCA-201ENST00000336904 PCDHA2Q9Y5H9 948 aa9.77□□□□□ -0.84
SNCA-201ENST00000336904 QSER1Q2KHR3 1735 aa9.77□□□□□ -0.84
SNCA-201ENST00000336904 LRRN2O75325 713 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 NOL4O94818 638 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 FKBP3Q00688 224 aaKnown RBP9.77□□□□□ -0.85
SNCA-201ENST00000336904 SLC7A5Q01650 507 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 LONRF2Q1L5Z9 754 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 GRIPAP1Q4V328 841 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 ZCWPW2Q504Y3 356 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 WNK4Q96J92 1243 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 ERGIC2Q96RQ1 377 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 COL20A1Q9P218 1284 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 VAV3Q9UKW4 847 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 PCDHA13Q9Y5I0 950 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 GJA3Q9Y6H8 435 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 ZBTB22O15209 634 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 ZRANB2O95218 330 aaKnown RBP eCLIP9.77□□□□□ -0.85
SNCA-201ENST00000336904 FTCDO95954 541 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 ALAS1P13196 640 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 GCFC2P16383 781 aaKnown RBP9.77□□□□□ -0.85
SNCA-201ENST00000336904 CYP2J2P51589 502 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 FAM193AP78312 1265 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 AMPD2Q01433 879 aa9.77□□□□□ -0.85
SNCA-201ENST00000336904 CXCL9Q07325 125 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms