RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 LEMD3Q9Y2U8 911 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 MYH13Q9UKX3 1938 aa15.05■□□□□ -0
SYNE3-201ENST00000334258 MYH2Q9UKX2 1941 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 GOLGA8HP0CJ92 632 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 MAGOHP61326 146 aaKnown RBP15.04■□□□□ -0
SYNE3-201ENST00000334258 SPRED3Q2MJR0 410 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 C6orf89Q6UWU4 347 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 MAGOHBQ96A72 148 aaKnown RBP15.04■□□□□ -0
SYNE3-201ENST00000334258 CPVLQ9H3G5 476 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 NARFQ9UHQ1 456 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 GGA2Q9UJY4 613 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 FBXL5Q9UKA1 691 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 TRAPPC3O43617 180 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 NAA25Q14CX7 972 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 INPP4AQ96PE3 977 aaPredicted RBP15.04■□□□□ -0
SYNE3-201ENST00000334258 TRIM31Q9BZY9 425 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 DDX47Q9H0S4 455 aaKnown RBP15.04■□□□□ -0
SYNE3-201ENST00000334258 ISCUQ9H1K1 167 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 VAT1LQ9HCJ6 419 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 SH3GLB2Q9NR46 395 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 TPX2Q9ULW0 747 aaKnown RBP15.04■□□□□ -0
SYNE3-201ENST00000334258 COL22A1Q8NFW1 1626 aaPredicted RBP15.04■□□□□ -0
SYNE3-201ENST00000334258 A0A087X0T9 212 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 MYMKA6NI61 221 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 FAM228BP0C875 321 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 PPP2R2AP63151 447 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 ZNF844Q08AG5 666 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 ASTE1Q2TB18 679 aaPredicted RBP15.04■□□□□ -0
SYNE3-201ENST00000334258 ANKRD20A8PQ5CZ79 823 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 EMC10Q5UCC4 262 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 HGSNATQ68CP4 663 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 TPTE2Q6XPS3 522 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 KIRREL3Q8IZU9 778 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 FAM133AQ8N9E0 248 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 MKNK2Q9HBH9 465 aa15.04■□□□□ -0
SYNE3-201ENST00000334258 CHD4Q14839 1912 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 PRPHP41219 470 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 SCTRP47872 440 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 NONOQ15233 471 aaKnown RBP eCLIP15.03■□□□□ -0
SYNE3-201ENST00000334258 PPP1R7Q15435 360 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 MEI1Q5TIA1 1274 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 RAPGEF5Q92565 580 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 BORCS6Q96GS4 357 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 FLT1P17948 1338 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 SART1O43290 800 aaKnown RBP15.03■□□□□ -0
SYNE3-201ENST00000334258 ORC4O43929 436 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 PPP1R12BO60237 982 aaPredicted RBP15.03■□□□□ -0
SYNE3-201ENST00000334258 GNAQP50148 359 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 RPS8P62241 208 aaKnown RBP15.03■□□□□ -0
SYNE3-201ENST00000334258 BIRC3Q13489 604 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 CUL1Q13616 776 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 HIBCHQ6NVY1 386 aaPredicted RBP15.03■□□□□ -0
SYNE3-201ENST00000334258 LRIG3Q6UXM1 1119 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 HVCN1Q96D96 273 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 DCP1AQ9NPI6 582 aaPredicted RBP15.03■□□□□ -0
SYNE3-201ENST00000334258 TBC1D7Q9P0N9 293 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 ATP6V0A2Q9Y487 856 aa15.03■□□□□ -0
SYNE3-201ENST00000334258 OPLAHO14841 1288 aa15.02■□□□□ -0
SYNE3-201ENST00000334258 SOGA3Q5TF21 947 aa15.02■□□□□ -0
SYNE3-201ENST00000334258 NRAPQ86VF7 1730 aa15.02■□□□□ -0
SYNE3-201ENST00000334258 MIEF2Q96C03 454 aa15.02■□□□□ -0
SYNE3-201ENST00000334258 NUCKS1Q9H1E3 243 aaKnown RBP15.02■□□□□ -0
SYNE3-201ENST00000334258 DPH5Q9H2P9 285 aa15.02■□□□□ -0
SYNE3-201ENST00000334258 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.02■□□□□ -0
SYNE3-201ENST00000334258 A0A1B0GUA9 196 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 KRIT1O00522 736 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 DAPK3O43293 454 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 TLR2O60603 784 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 SLC18A3Q16572 532 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 RCSD1Q6JBY9 416 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 UNC13DQ70J99 1090 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 KRT27Q7Z3Y8 459 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 PNMA8AQ86V59 439 aaPredicted RBP15.02□□□□□ -0.01
SYNE3-201ENST00000334258 DNAAF5Q86Y56 855 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 GLIS3Q8NEA6 775 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 CEP72Q9P209 647 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 SPATA31A6Q5VVP1 1343 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 C21orf2O43822 256 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 PAX7P23759 505 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 RBM5P52756 815 aaKnown RBP eCLIP15.02□□□□□ -0.01
SYNE3-201ENST00000334258 LRRC63Q05C16 580 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 DHX9Q08211 1270 aaKnown RBP15.02□□□□□ -0.01
SYNE3-201ENST00000334258 KCNMA1Q12791 1236 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 GUF1Q8N442 669 aaKnown RBP15.02□□□□□ -0.01
SYNE3-201ENST00000334258 MDM1Q8TC05 714 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 ANKS1AQ92625 1134 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 GOPCQ9HD26 462 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 CNOT8Q9UFF9 292 aaKnown RBP15.02□□□□□ -0.01
SYNE3-201ENST00000334258 TIAM2Q8IVF5 1701 aa15.02□□□□□ -0.01
SYNE3-201ENST00000334258 TLDC2A0PJX2 215 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 SMCO2A6NFE2 343 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 DCDC2CA8MYV0 355 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 PDE6BP35913 854 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 UAP1Q16222 522 aaPredicted RBP15.01□□□□□ -0.01
SYNE3-201ENST00000334258 ASIC2Q16515 512 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 NEK8Q86SG6 692 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 NELFCDQ8IXH7 590 aa15.01□□□□□ -0.01
SYNE3-201ENST00000334258 ZNF513Q8N8E2 541 aaPredicted RBP15.01□□□□□ -0.01
SYNE3-201ENST00000334258 C1orf131Q8NDD1 294 aaKnown RBP15.01□□□□□ -0.01
SYNE3-201ENST00000334258 LARP4BQ92615 738 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms