RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 SLC12A3P55017 1021 aa20.1■□□□□ 0.81
LYSMD4-201ENST00000332728 CAMKK2Q96RR4 588 aa20.1■□□□□ 0.81
LYSMD4-201ENST00000332728 EIF2AK1Q9BQI3 630 aaKnown RBP20.1■□□□□ 0.81
LYSMD4-201ENST00000332728 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.1■□□□□ 0.81
LYSMD4-201ENST00000332728 ZNF341Q9BYN7 854 aa20.1■□□□□ 0.81
LYSMD4-201ENST00000332728 ARHGEF10LQ9HCE6 1279 aa20.1■□□□□ 0.81
LYSMD4-201ENST00000332728 MYO6Q9UM54 1294 aa20.1■□□□□ 0.81
LYSMD4-201ENST00000332728 COL4A3BPQ9Y5P4 624 aa20.1■□□□□ 0.81
LYSMD4-201ENST00000332728 TMEM150BA6NC51 233 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 NR2F2P24468 414 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 RSRC2Q7L4I2 434 aaKnown RBP20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 GSPT2Q8IYD1 628 aaKnown RBP20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 KRT222Q8N1A0 295 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 RDH13Q8NBN7 331 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 BANK1Q8NDB2 785 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 NEK11Q8NG66 645 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 MMS19Q96T76 1030 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 PCDHB13Q9Y5F0 798 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 ARFGEF1Q9Y6D6 1849 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 TUBB4AP04350 444 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 INPP5BP32019 993 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 EPS15P42566 896 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 USP11P51784 963 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 RNASE9P60153 205 aaKnown RBP20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 RASSF7Q02833 373 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 NT5C3AQ9H0P0 336 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 CAPN6Q9Y6Q1 641 aa20.09■□□□□ 0.81
LYSMD4-201ENST00000332728 RAPGEF1Q13905 1077 aa20.08■□□□□ 0.81
LYSMD4-201ENST00000332728 GIT2Q14161 759 aa20.08■□□□□ 0.81
LYSMD4-201ENST00000332728 COG2Q14746 738 aa20.08■□□□□ 0.81
LYSMD4-201ENST00000332728 GMCL1Q96IK5 515 aa20.08■□□□□ 0.81
LYSMD4-201ENST00000332728 ANKZF1Q9H8Y5 726 aa20.08■□□□□ 0.81
LYSMD4-201ENST00000332728 ARGLU1Q9NWB6 273 aaPredicted RBP20.08■□□□□ 0.81
LYSMD4-201ENST00000332728 WRAP73Q9P2S5 460 aaPredicted RBP20.08■□□□□ 0.81
LYSMD4-201ENST00000332728 CNTNAP1P78357 1384 aa20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 ENTPD3O75355 529 aa20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 CYLC1P35663 651 aaPredicted RBP20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 KIF11P52732 1056 aa20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 FKBP3Q00688 224 aaKnown RBP20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 CXCL9Q07325 125 aa20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 EHHADHQ08426 723 aa20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 GJB7Q6PEY0 223 aa20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 SAMD7Q7Z3H4 446 aa20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 GMCL1P1Q8NEA9 526 aa20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 CAGE1Q8TC20 777 aa20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 IFIH1Q9BYX4 1025 aaKnown RBP20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 SALL4Q9UJQ4 1053 aa20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 GJA3Q9Y6H8 435 aa20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 FECHP22830 423 aa20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 PLA2G4AP47712 749 aa20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 HDLBPQ00341 1268 aaKnown RBP20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 SPA17Q15506 151 aa20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 LRCH2Q5VUJ6 765 aa20.08■□□□□ 0.8
LYSMD4-201ENST00000332728 MYH10P35580 1976 aa20.07■□□□□ 0.8
LYSMD4-201ENST00000332728 SLC9A1P19634 815 aa20.07■□□□□ 0.8
LYSMD4-201ENST00000332728 KCNA3P22001 575 aa20.07■□□□□ 0.8
LYSMD4-201ENST00000332728 SREBF1P36956 1147 aa20.07■□□□□ 0.8
LYSMD4-201ENST00000332728 PRKG1Q13976 671 aa20.07■□□□□ 0.8
LYSMD4-201ENST00000332728 CC2D1AQ6P1N0 951 aaPredicted RBP20.07■□□□□ 0.8
LYSMD4-201ENST00000332728 FAM133AQ8N9E0 248 aa20.07■□□□□ 0.8
LYSMD4-201ENST00000332728 ERGIC2Q96RQ1 377 aa20.07■□□□□ 0.8
LYSMD4-201ENST00000332728 PCDHA2Q9Y5H9 948 aa20.07■□□□□ 0.8
LYSMD4-201ENST00000332728 ERICH4A6NGS2 130 aa20.07■□□□□ 0.8
LYSMD4-201ENST00000332728 NFIBO00712 420 aa20.07■□□□□ 0.8
LYSMD4-201ENST00000332728 SLFN12Q8IYM2 578 aa20.07■□□□□ 0.8
LYSMD4-201ENST00000332728 IL31RAQ8NI17 732 aa20.07■□□□□ 0.8
LYSMD4-201ENST00000332728 HDAC9Q9UKV0 1011 aa20.07■□□□□ 0.8
LYSMD4-201ENST00000332728 KDM3AQ9Y4C1 1321 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 WNT10BO00744 389 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 HOXD13P35453 343 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 VSNL1P62760 191 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 GOLPH3Q9H4A6 298 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 CTAGE15A4D2H0 777 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 CTAGE8P0CG41 777 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 ALAS1P13196 640 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 LRRC63Q05C16 580 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 ORC2Q13416 577 aaPredicted RBP20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 HAUS3Q68CZ6 603 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 ZNF771Q7L3S4 317 aaPredicted RBP20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 CTAGE6Q86UF2 777 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 LDHDQ86WU2 507 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 CTAGE4Q8IX94 777 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 NIM1KQ8IY84 436 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 MYCT1Q8N699 235 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 PACSIN2Q9UNF0 486 aaPredicted RBP20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 RABGAP1Q9Y3P9 1069 aa20.06■□□□□ 0.8
LYSMD4-201ENST00000332728 C2orf54Q08AI8 447 aa20.05■□□□□ 0.8
LYSMD4-201ENST00000332728 KIF5AQ12840 1032 aa20.05■□□□□ 0.8
LYSMD4-201ENST00000332728 AP3B2Q13367 1082 aa20.05■□□□□ 0.8
LYSMD4-201ENST00000332728 MEA1Q16626 185 aa20.05■□□□□ 0.8
LYSMD4-201ENST00000332728 ZCWPW2Q504Y3 356 aa20.05■□□□□ 0.8
LYSMD4-201ENST00000332728 FAM151AQ8WW52 585 aa20.05■□□□□ 0.8
LYSMD4-201ENST00000332728 CRYGNQ8WXF5 182 aa20.05■□□□□ 0.8
LYSMD4-201ENST00000332728 RAVER2Q9HCJ3 691 aaKnown RBP20.05■□□□□ 0.8
LYSMD4-201ENST00000332728 VAV3Q9UKW4 847 aa20.05■□□□□ 0.8
LYSMD4-201ENST00000332728 PCDHA13Q9Y5I0 950 aa20.05■□□□□ 0.8
LYSMD4-201ENST00000332728 GCOM1H8Y6P7 765 aaPredicted RBP20.05■□□□□ 0.8
LYSMD4-201ENST00000332728 PDE2AO00408 941 aaPredicted RBP20.05■□□□□ 0.8
LYSMD4-201ENST00000332728 TBC1D8O95759 1140 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms