RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 WDR19Q8NEZ3 1342 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 I3L4J1 428 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 GBP1P32455 592 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 VEPH1Q14D04 833 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 CTAGE3PQ8IX95 158 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 TRMT2AQ8IZ69 625 aaKnown RBP9.74□□□□□ -0.85
CD28-201ENST00000324106 KRT222Q8N1A0 295 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 ZNF280CQ8ND82 737 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 TACC3Q9Y6A5 838 aa9.74□□□□□ -0.85
CD28-201ENST00000324106 HUS1O60921 280 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 PPARGP37231 505 aaPredicted RBP9.73□□□□□ -0.85
CD28-201ENST00000324106 ZNF75DP51815 510 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 PRELPP51888 382 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 HMGCS2P54868 508 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 MAN2A1Q16706 1144 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 ZNF589Q86UQ0 364 aaPredicted RBP9.73□□□□□ -0.85
CD28-201ENST00000324106 NSUN7Q8NE18 718 aaKnown RBP9.73□□□□□ -0.85
CD28-201ENST00000324106 P2RX5Q93086 422 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 PKNOX2Q96KN3 472 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 CFAP57Q96MR6 1250 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 EMILIN3Q9NT22 766 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 POLIQ9UNA4 740 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 TRAPPC3O43617 180 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 KRT15P19012 456 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 NNMTP40261 264 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 HDLBPQ00341 1268 aaKnown RBP9.73□□□□□ -0.85
CD28-201ENST00000324106 HHATQ5VTY9 493 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 TTBK2Q6IQ55 1244 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 INTS8Q75QN2 995 aaKnown RBP9.73□□□□□ -0.85
CD28-201ENST00000324106 GANCQ8TET4 914 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 ZNF302Q9NR11 478 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 KDM6AO15550 1401 aaPredicted RBP9.73□□□□□ -0.85
CD28-201ENST00000324106 UBE2SQ16763 222 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 BZW1Q7L1Q6 419 aaKnown RBP9.73□□□□□ -0.85
CD28-201ENST00000324106 HAUS4Q9H6D7 363 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 RPAP3Q9H6T3 665 aaPredicted RBP9.73□□□□□ -0.85
CD28-201ENST00000324106 INPP5FQ9Y2H2 1132 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 DEPDC5O75140 1603 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 SYNJ2BP-COX16A0A087WUM0 186 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 H7C0C1 242 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 P4HBP07237 508 aaKnown RBP9.73□□□□□ -0.85
CD28-201ENST00000324106 VEGFAP15692 232 aaPredicted RBP9.73□□□□□ -0.85
CD28-201ENST00000324106 TCP1P17987 556 aaKnown RBP9.73□□□□□ -0.85
CD28-201ENST00000324106 ATP5OP48047 213 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 HDXQ7Z353 690 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 RBSNQ9H1K0 784 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 BHMT2Q9H2M3 363 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 COX16Q9P0S2 106 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 SERPINA10Q9UK55 444 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 IQGAP3Q86VI3 1631 aa9.73□□□□□ -0.85
CD28-201ENST00000324106 DPEP1P16444 411 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 QARSP47897 775 aaKnown RBP9.72□□□□□ -0.85
CD28-201ENST00000324106 KIF23Q02241 960 aaPredicted RBP9.72□□□□□ -0.85
CD28-201ENST00000324106 PPP2R5CQ13362 524 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 ANGEL2Q5VTE6 544 aaKnown RBP9.72□□□□□ -0.85
CD28-201ENST00000324106 CEP95Q96GE4 821 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 CNOT6LQ96LI5 555 aaKnown RBP9.72□□□□□ -0.85
CD28-201ENST00000324106 SPATA33Q96N06 139 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 KRT12Q99456 494 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 TUBGCP2Q9BSJ2 902 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 TRIM31Q9BZY9 425 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 PLCB1Q9NQ66 1216 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 GARSP41250 739 aaKnown RBP9.72□□□□□ -0.85
CD28-201ENST00000324106 GMPSP49915 693 aaPredicted RBP9.72□□□□□ -0.85
CD28-201ENST00000324106 DNAJC24Q6P3W2 148 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 C10orf67Q8IYJ2 551 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 ZNF34Q8IZ26 560 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 RAB3IPQ96QF0 476 aaPredicted RBP9.72□□□□□ -0.85
CD28-201ENST00000324106 TRIM62Q9BVG3 475 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 VPS37BQ9H9H4 285 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 PRDM5Q9NQX1 630 aaPredicted RBP9.72□□□□□ -0.85
CD28-201ENST00000324106 FAM8A1Q9UBU6 413 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 SEL1LQ9UBV2 794 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 CCL15-CCL14A0A0B4J2E2 113 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 ORC4O43929 436 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 CAMTA2O94983 1202 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 EPHB1P54762 984 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 ARHGAP4P98171 946 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 LRRC63Q05C16 580 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 RPS6KA2Q15349 733 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 CCL15Q16663 113 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 PPP4R1Q8TF05 950 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 PGBD1Q96JS3 809 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 NUDT12Q9BQG2 462 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 RRP9O43818 475 aaKnown RBP9.72□□□□□ -0.85
CD28-201ENST00000324106 CELF2O95319 508 aaKnown RBP9.72□□□□□ -0.85
CD28-201ENST00000324106 THNSL1Q8IYQ7 743 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 OR6B3Q8NGW1 331 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 OSBPL5Q9H0X9 879 aaPredicted RBP9.72□□□□□ -0.85
CD28-201ENST00000324106 ZNF148Q9UQR1 794 aa9.72□□□□□ -0.85
CD28-201ENST00000324106 FARP1Q9Y4F1 1045 aaPredicted RBP9.72□□□□□ -0.85
CD28-201ENST00000324106 ALDH1A1P00352 501 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 S100BP04271 92 aaPredicted RBP9.71□□□□□ -0.85
CD28-201ENST00000324106 PEX3P56589 373 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 PSMC5P62195 406 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 CCDC121Q6ZUS5 278 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 SDCCAG8Q86SQ7 713 aaPredicted RBP9.71□□□□□ -0.85
CD28-201ENST00000324106 SKA2Q8WVK7 121 aaPredicted RBP9.71□□□□□ -0.85
CD28-201ENST00000324106 STRIP2Q9ULQ0 834 aa9.71□□□□□ -0.85
CD28-201ENST00000324106 HYOU1Q9Y4L1 999 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms