RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 RPA1P27694 616 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 CDC25AP30304 524 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 ADCYAP1R1P41586 468 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 SYKP43405 635 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 SNW1Q13573 536 aaKnown RBP15.28■□□□□ 0.04
PRPF18-201ENST00000320054 KLHL40Q2TBA0 621 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 DUSP28Q4G0W2 176 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 CYFIP1Q7L576 1253 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 MIER3Q7Z3K6 550 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 DHX37Q8IY37 1157 aaKnown RBP15.28■□□□□ 0.04
PRPF18-201ENST00000320054 SLAIN1Q8ND83 568 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 SNX29Q8TEQ0 813 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 EMID1Q96A84 441 aaPredicted RBP15.28■□□□□ 0.04
PRPF18-201ENST00000320054 CALML4Q96GE6 196 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 HSD17B14Q9BPX1 270 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 EIF2AK1Q9BQI3 630 aaKnown RBP15.28■□□□□ 0.04
PRPF18-201ENST00000320054 BCAS3Q9H6U6 928 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 TUFT1Q9NNX1 390 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 DISC1Q9NRI5 854 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 USP25Q9UHP3 1055 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 FRMPD3Q5JV73 1810 aa15.28■□□□□ 0.04
PRPF18-201ENST00000320054 CHMP2AO43633 222 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 ATG7O95352 703 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 HMGCRP04035 888 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 HSPA8P11142 646 aaKnown RBP15.27■□□□□ 0.04
PRPF18-201ENST00000320054 CYBAP13498 195 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 ACTR2P61160 394 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 TNFAIP2Q03169 654 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 ARHGAP1Q07960 439 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 LAMC2Q13753 1193 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 TPRNQ4KMQ1 711 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 PRAMEF19Q5SWL8 479 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 TIGD1Q96MW7 591 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 NT5C3AQ9H0P0 336 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 MLXIPQ9HAP2 919 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 FAM184BQ9ULE4 1060 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 Q9Y3F1 56 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 TRIM17Q9Y577 477 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 PCDHA10Q9Y5I2 948 aa15.27■□□□□ 0.04
PRPF18-201ENST00000320054 A0A087X0B3 334 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.26■□□□□ 0.03
PRPF18-201ENST00000320054 POLR2DO15514 142 aaKnown RBP15.26■□□□□ 0.03
PRPF18-201ENST00000320054 TRAK2O60296 914 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 NR1I2O75469 434 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 ZNF202O95125 648 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 P4HBP07237 508 aaKnown RBP15.26■□□□□ 0.03
PRPF18-201ENST00000320054 PSAPP07602 524 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 SPATA31C1P0DKV0 1188 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 AKR1A1P14550 325 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 ELNP15502 786 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 SMPD1P17405 629 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 CCT6AP40227 531 aaKnown RBP15.26■□□□□ 0.03
PRPF18-201ENST00000320054 CACNB2Q08289 660 aaPredicted RBP15.26■□□□□ 0.03
PRPF18-201ENST00000320054 GRB10Q13322 594 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 KARSQ15046 597 aaKnown RBP15.26■□□□□ 0.03
PRPF18-201ENST00000320054 TMEM119Q4V9L6 283 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 MAP3K21Q5TCX8 1036 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 MIS18BP1Q6P0N0 1132 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 ABHD15Q6UXT9 468 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 IQUBQ8NA54 791 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 TRPV1Q8NER1 839 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 CDK5RAP3Q96JB5 506 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 PNMA5Q96PV4 448 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 CUEDC2Q9H467 287 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 DDX19AQ9NUU7 478 aaKnown RBP15.26■□□□□ 0.03
PRPF18-201ENST00000320054 DACT1Q9NYF0 836 aa15.26■□□□□ 0.03
PRPF18-201ENST00000320054 GNEQ9Y223 722 aaKnown RBP15.26■□□□□ 0.03
PRPF18-201ENST00000320054 IGKV6D-21A0A0A0MT36 114 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 GSTTP1A0A1W2PQM5 241 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 FOXN1O15353 648 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 MED24O75448 989 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 SLITRK3O94933 977 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 SUPT20HL2P0C7V6 817 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 E2F4Q16254 413 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 TMEM63BQ5T3F8 832 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 RRAGBQ5VZM2 374 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 CATSPER3Q86XQ3 398 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 RASSF8Q8NHQ8 419 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 SEPT1Q8WYJ6 367 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 COPS5Q92905 334 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 DYDC2Q96IM9 177 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 GPR20Q99678 358 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 STK17AQ9UEE5 414 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 PTPN22Q9Y2R2 807 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 SAMM50Q9Y512 469 aa15.25■□□□□ 0.03
PRPF18-201ENST00000320054 POTEB3A0JP26 581 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 ADCY6O43306 1168 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 DKC1O60832 514 aaKnown RBP eCLIP15.24■□□□□ 0.03
PRPF18-201ENST00000320054 KINO60870 393 aaKnown RBP15.24■□□□□ 0.03
PRPF18-201ENST00000320054 LYPLA2O95372 231 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 SLFN14P0C7P3 912 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 PRKAR2AP13861 404 aaKnown RBP15.24■□□□□ 0.03
PRPF18-201ENST00000320054 PLCG1P19174 1290 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 GRK4P32298 578 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 STAT6P42226 847 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 QARSP47897 775 aaKnown RBP15.24■□□□□ 0.03
PRPF18-201ENST00000320054 CTCFP49711 727 aaPredicted RBP15.24■□□□□ 0.03
PRPF18-201ENST00000320054 PSMC5P62195 406 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 TRIM32Q13049 653 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 ECM1Q16610 540 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms