RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 GOLGA8JA6NMD2 632 aa10.21□□□□□ -0.78
TMEM39A-201ENST00000319172 YDJCA8MPS7 323 aa10.21□□□□□ -0.78
TMEM39A-201ENST00000319172 ABCB4P21439 1286 aa10.21□□□□□ -0.78
TMEM39A-201ENST00000319172 STXBP2Q15833 593 aa10.21□□□□□ -0.78
TMEM39A-201ENST00000319172 MIS18BP1Q6P0N0 1132 aa10.21□□□□□ -0.78
TMEM39A-201ENST00000319172 CEP112Q8N8E3 955 aa10.21□□□□□ -0.78
TMEM39A-201ENST00000319172 ACRBPQ8NEB7 543 aa10.21□□□□□ -0.78
TMEM39A-201ENST00000319172 GOLGA5Q8TBA6 731 aa10.21□□□□□ -0.78
TMEM39A-201ENST00000319172 GOLGA1Q92805 767 aa10.21□□□□□ -0.78
TMEM39A-201ENST00000319172 TEX13BQ9BXU2 312 aa10.21□□□□□ -0.78
TMEM39A-201ENST00000319172 ARFGEF2Q9Y6D5 1785 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 WDR64B1ANS9 1081 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 POLR3GO15318 223 aaPredicted RBP10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 CNGA1P29973 690 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 STAT1P42224 750 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 MAP3K9P80192 1104 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 LRRC63Q05C16 580 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 PPP1R13BQ96KQ4 1090 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 GOLGA6L10A6NI86 522 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 PSAPP07602 524 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 SWSAP1Q6NVH7 229 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 FAM83AQ86UY5 434 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 U2AF1L4Q8WU68 220 aaKnown RBP10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 DNAI2Q9GZS0 605 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 GABBR1Q9UBS5 961 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 BCRP11274 1271 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 PSMC2P35998 433 aaKnown RBP10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 RPS6P62753 249 aaKnown RBP10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 CYP27A1Q02318 531 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 MAP9Q49MG5 647 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 FAM160B1Q5W0V3 765 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 ANKRD40Q6AI12 368 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 SCYL3Q8IZE3 742 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 MB21D1Q8N884 522 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 GMCL1Q96IK5 515 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 TBC1D22BQ9NU19 505 aa10.2□□□□□ -0.78
TMEM39A-201ENST00000319172 SHTN1A0MZ66 631 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 INO80B-WBP1J3KQ70 363 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 CTNNA2P26232 953 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 QARSP47897 775 aaKnown RBP10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 ELF2Q15723 593 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 ZBTB8OSQ8IWT0 167 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 LMBR1Q8WVP7 490 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 FUCA2Q9BTY2 467 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 GLIS2Q9BZE0 524 aaPredicted RBP10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 TSGA10Q9BZW7 698 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 TRIM6Q9C030 488 aaPredicted RBP10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 INO80BQ9C086 356 aaPredicted RBP10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 DOT1LQ8TEK3 1739 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 BUB1O43683 1085 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 LRRN2O75325 713 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 FAM47CQ5HY64 1035 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 ZNF668Q96K58 619 aaPredicted RBP10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 NOX5Q96PH1 765 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 FBXO40Q9UH90 709 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 CD2APQ9Y5K6 639 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 AFPP02771 609 aaKnown RBP10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 P4HBP07237 508 aaKnown RBP10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 NR3C2P08235 984 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 C2orf69Q8N8R5 385 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 CYP2W1Q8TAV3 490 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 ACCSQ96QU6 501 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 SELENOOQ9BVL4 669 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 FHDC1Q9C0D6 1143 aaPredicted RBP10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 SLC5A4Q9NY91 659 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 IQCA1LA6NCM1 817 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 C19orf81C9J6K1 198 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 FGRP09769 529 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 CD19P15391 556 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 CDAN1Q8IWY9 1227 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 MYRIPQ8NFW9 859 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 TAAR1Q96RJ0 339 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 ARFGAP3Q9NP61 516 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 SPTLC3Q9NUV7 552 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 CTTNBP2NLQ9P2B4 639 aa10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 ZNF215Q9UL58 517 aaPredicted RBP10.19□□□□□ -0.78
TMEM39A-201ENST00000319172 LGALS16A8MUM7 142 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 NFIBO00712 420 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 SLC16A4O15374 487 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 SRGAP2CP0DJJ0 459 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 NMT1P30419 496 aaKnown RBP10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 CDR1P51861 262 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 FKBP1AP62942 108 aaKnown RBP10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 KRT76Q01546 638 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 FUT2Q10981 343 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 ADSSL1Q8N142 457 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 GUF1Q8N442 669 aaKnown RBP10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 ERO1AQ96HE7 468 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 NUCKS1Q9H1E3 243 aaKnown RBP10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 MYO1AQ9UBC5 1043 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 COL18A1P39060 1754 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 WNT7AO00755 349 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 MSH4O15457 936 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 VCAM1P19320 739 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 JAK3P52333 1124 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 KCNB1Q14721 858 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 GMCL1P1Q8NEA9 526 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 RBM46Q8TBY0 533 aaKnown RBP10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 KIFAP3Q92845 792 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 PNMA3Q9UL41 463 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms