RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ROPN1Q9HAT0 212 aaPredicted RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 ADAMTS1Q9UHI8 967 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 RASSF10A6NK89 507 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 PRKCIP41743 596 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 CAVIN4Q5BKX8 364 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 SRBD1Q8N5C6 995 aaKnown RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 MIGA1Q8NAN2 632 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 ABCF2Q9UG63 623 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 COBLO75128 1261 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 FTCDO95954 541 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 SSBP05455 408 aaKnown RBP eCLIP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 MMEP08473 750 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 MARSP56192 900 aaKnown RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 E2F5Q15329 346 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 ZRSR2Q15696 482 aaKnown RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 INF2Q27J81 1249 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 GRAMD1AQ96CP6 724 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 KLHL29Q96CT2 875 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 CPSF2Q9P2I0 782 aaKnown RBP5.22□□□□□ -1.57
PTPN13-201ENST00000316707 AMFRQ9UKV5 643 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 TFR2Q9UP52 801 aa5.22□□□□□ -1.57
PTPN13-201ENST00000316707 RPL13P26373 211 aaKnown RBP5.21□□□□□ -1.57
PTPN13-201ENST00000316707 SKIV2L2P42285 1042 aaKnown RBP5.21□□□□□ -1.57
PTPN13-201ENST00000316707 ATP11AP98196 1134 aa5.21□□□□□ -1.57
PTPN13-201ENST00000316707 TMC3Q7Z5M5 1100 aa5.21□□□□□ -1.57
PTPN13-201ENST00000316707 PROSER2Q86WR7 435 aaPredicted RBP5.21□□□□□ -1.57
PTPN13-201ENST00000316707 RIOK1Q9BRS2 568 aaKnown RBP5.21□□□□□ -1.57
PTPN13-201ENST00000316707 NLRC4Q9NPP4 1024 aa5.21□□□□□ -1.57
PTPN13-201ENST00000316707 PLEKP08567 350 aaPredicted RBP5.21□□□□□ -1.58
PTPN13-201ENST00000316707 MAP2K1Q02750 393 aaPredicted RBP5.21□□□□□ -1.58
PTPN13-201ENST00000316707 TRPM8Q7Z2W7 1104 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 TEX9Q8N6V9 391 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 MICAL1Q8TDZ2 1067 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 CCDC77Q9BR77 488 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 SPZ1Q9BXG8 430 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 SLC12A4Q9UP95 1085 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 LMO7Q8WWI1 1683 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 USP17L12C9JPN9 530 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 USP17L21D6R901 530 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 PODXLO00592 558 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 IL2RBP14784 551 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 GFPT1Q06210 699 aaPredicted RBP5.21□□□□□ -1.58
PTPN13-201ENST00000316707 GRM4Q14833 912 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 DENND2CQ68D51 928 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 TRIM59Q8IWR1 403 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 GLT8D2Q9H1C3 349 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 BHMG1C9JSJ3 638 aaPredicted RBP5.21□□□□□ -1.58
PTPN13-201ENST00000316707 PPP1R12BO60237 982 aaPredicted RBP5.21□□□□□ -1.58
PTPN13-201ENST00000316707 FERP16591 822 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 ALDH3A1P30838 453 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 MRPS35P82673 323 aaKnown RBP5.21□□□□□ -1.58
PTPN13-201ENST00000316707 PIGWQ7Z7B1 504 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 CCDC65Q8IXS2 484 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 RASGEF1CQ8N431 466 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 FAXDC2Q96IV6 333 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 BARHL2Q9NY43 387 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 KLHL14Q9P2G3 628 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 AHCYL1O43865 530 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 CLTAP09496 248 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 ALADP13716 330 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 IL6STP40189 918 aaPredicted RBP5.21□□□□□ -1.58
PTPN13-201ENST00000316707 POLR2FP61218 127 aaKnown RBP5.21□□□□□ -1.58
PTPN13-201ENST00000316707 TSNAXIP1Q2TAA8 658 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 C11orf91Q3C1V1 193 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 SPTY2D1Q68D10 685 aaPredicted RBP5.21□□□□□ -1.58
PTPN13-201ENST00000316707 DNAJC10Q8IXB1 793 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 PNMA1Q8ND90 353 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 DYDC1Q8WWB3 177 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 ATXN2LQ8WWM7 1075 aaKnown RBP5.21□□□□□ -1.58
PTPN13-201ENST00000316707 CNKSR1Q969H4 720 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 PLVAPQ9BX97 442 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 ZMYND12Q9H0C1 365 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 STK24Q9Y6E0 443 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 hCG_1642624A0A1W2PR95 340 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 PHF20L1A8MW92 1017 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 TLR2O60603 784 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 ATP2C2O75185 946 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 WFS1O76024 890 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 SETDB1Q15047 1291 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 TXNRD1Q16881 649 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.21□□□□□ -1.58
PTPN13-201ENST00000316707 TBC1D1Q86TI0 1168 aaPredicted RBP5.21□□□□□ -1.58
PTPN13-201ENST00000316707 KCTD17Q8N5Z5 321 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 SEMA6BQ9H3T3 888 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 SLC39A2Q9NP94 309 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 BSDC1Q9NW68 430 aaPredicted RBP5.21□□□□□ -1.58
PTPN13-201ENST00000316707 EHD2Q9NZN4 543 aa5.21□□□□□ -1.58
PTPN13-201ENST00000316707 MEGF6O75095 1541 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 EVI5O60447 810 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 CHRNA3P32297 505 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 RASSF2P50749 326 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 CALCOCO2Q13137 446 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 BLMHQ13867 455 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 CEP128Q6ZU80 1094 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 REXO1Q8N1G1 1221 aaKnown RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 RAB3IPQ96QF0 476 aaPredicted RBP5.2□□□□□ -1.58
PTPN13-201ENST00000316707 PRDM11Q9NQV5 511 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 ANKIB1Q9P2G1 1089 aa5.2□□□□□ -1.58
PTPN13-201ENST00000316707 SEC63Q9UGP8 760 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms