RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 CTAGE15A4D2H0 777 aa16.33■□□□□ 0.21
CLK4-201ENST00000316308 CTAGE8P0CG41 777 aa16.33■□□□□ 0.21
CLK4-201ENST00000316308 CXCR5P32302 372 aa16.33■□□□□ 0.21
CLK4-201ENST00000316308 CYLC1P35663 651 aaPredicted RBP16.33■□□□□ 0.21
CLK4-201ENST00000316308 FKBP3Q00688 224 aaKnown RBP16.33■□□□□ 0.21
CLK4-201ENST00000316308 FIGNQ5HY92 759 aa16.33■□□□□ 0.21
CLK4-201ENST00000316308 CC2D2BQ6DHV5 1058 aa16.33■□□□□ 0.21
CLK4-201ENST00000316308 CTAGE6Q86UF2 777 aa16.33■□□□□ 0.21
CLK4-201ENST00000316308 CTAGE4Q8IX94 777 aa16.33■□□□□ 0.21
CLK4-201ENST00000316308 GDAP1L1Q96MZ0 367 aa16.33■□□□□ 0.21
CLK4-201ENST00000316308 ARFGAP3Q9NP61 516 aa16.33■□□□□ 0.21
CLK4-201ENST00000316308 WRAP73Q9P2S5 460 aaPredicted RBP16.33■□□□□ 0.21
CLK4-201ENST00000316308 PCDHA13Q9Y5I0 950 aa16.33■□□□□ 0.21
CLK4-201ENST00000316308 CNTNAP1P78357 1384 aa16.33■□□□□ 0.2
CLK4-201ENST00000316308 IGLV3-22A0A075B6J6 115 aa16.33■□□□□ 0.2
CLK4-201ENST00000316308 H3BQF6 201 aa16.33■□□□□ 0.2
CLK4-201ENST00000316308 NCK2O43639 380 aa16.33■□□□□ 0.2
CLK4-201ENST00000316308 FKBP1AP62942 108 aaKnown RBP16.33■□□□□ 0.2
CLK4-201ENST00000316308 PSMD2Q13200 908 aa16.33■□□□□ 0.2
CLK4-201ENST00000316308 BEND6Q5SZJ8 279 aaPredicted RBP16.33■□□□□ 0.2
CLK4-201ENST00000316308 CNKSR1Q969H4 720 aa16.33■□□□□ 0.2
CLK4-201ENST00000316308 IFIH1Q9BYX4 1025 aaKnown RBP16.33■□□□□ 0.2
CLK4-201ENST00000316308 MYO1AQ9UBC5 1043 aa16.33■□□□□ 0.2
CLK4-201ENST00000316308 VAV2P52735 878 aa16.33■□□□□ 0.2
CLK4-201ENST00000316308 POLR2FP61218 127 aaKnown RBP16.33■□□□□ 0.2
CLK4-201ENST00000316308 KRT83P78385 493 aa16.33■□□□□ 0.2
CLK4-201ENST00000316308 ADAM9Q13443 819 aa16.33■□□□□ 0.2
CLK4-201ENST00000316308 GSPT2Q8IYD1 628 aaKnown RBP16.33■□□□□ 0.2
CLK4-201ENST00000316308 COG1Q8WTW3 980 aa16.33■□□□□ 0.2
CLK4-201ENST00000316308 LSM14BQ9BX40 385 aaKnown RBP16.33■□□□□ 0.2
CLK4-201ENST00000316308 ZNF70Q9UC06 446 aaPredicted RBP16.33■□□□□ 0.2
CLK4-201ENST00000316308 KDM3AQ9Y4C1 1321 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 BUB1O43683 1085 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 KRT86O43790 486 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 N4BP1O75113 896 aaKnown RBP16.32■□□□□ 0.2
CLK4-201ENST00000316308 ENTPD3O75355 529 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 HNRNPH3P31942 346 aaKnown RBP16.32■□□□□ 0.2
CLK4-201ENST00000316308 PPP1R2P41236 205 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 CASP4P49662 377 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 AP3B2Q13367 1082 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 Q4G0T1 1027 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 PDXDC1Q6P996 788 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 MSANTD4Q8NCY6 345 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 PURBQ96QR8 312 aaKnown RBP16.32■□□□□ 0.2
CLK4-201ENST00000316308 TSG101Q99816 390 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 BMP2KQ9NSY1 1161 aaPredicted RBP16.32■□□□□ 0.2
CLK4-201ENST00000316308 SAR1BQ9Y6B6 198 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 FRMD3A2A2Y4 597 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 CLIC2O15247 247 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 STAT2P52630 851 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 TRIM59Q8IWR1 403 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 CCDC65Q8IXS2 484 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 CCDC170Q8IYT3 715 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 EIF2AK1Q9BQI3 630 aaKnown RBP16.32■□□□□ 0.2
CLK4-201ENST00000316308 PKD2L1Q9P0L9 805 aa16.32■□□□□ 0.2
CLK4-201ENST00000316308 AKR1B10O60218 316 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 EGFRP00533 1210 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 NR2F2P24468 414 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 RPA1P27694 616 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 ZNF76P36508 570 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 MMP14P50281 582 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 RASSF7Q02833 373 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 WHAMMP3Q1A5X7 153 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 ASTE1Q2TB18 679 aaPredicted RBP16.31■□□□□ 0.2
CLK4-201ENST00000316308 PAPD7Q5XG87 772 aaKnown RBP16.31■□□□□ 0.2
CLK4-201ENST00000316308 CACNA2D4Q7Z3S7 1137 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 SLFN12Q8IYM2 578 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 UBXN6Q9BZV1 441 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 JADE2Q9NQC1 790 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 SLC9A1P19634 815 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 OAS2P29728 719 aaKnown RBP16.31■□□□□ 0.2
CLK4-201ENST00000316308 NBPF9Q3BBW0 867 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 ZC2HC1CQ53FD0 456 aaPredicted RBP16.31■□□□□ 0.2
CLK4-201ENST00000316308 BTNL9Q6UXG8 535 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 NEK11Q8NG66 645 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 PACSIN1Q9BY11 444 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 DEF6Q9H4E7 631 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 AJAP1Q9UKB5 411 aaPredicted RBP16.31■□□□□ 0.2
CLK4-201ENST00000316308 RAB21Q9UL25 225 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 ZBTB21Q9ULJ3 1066 aa16.31■□□□□ 0.2
CLK4-201ENST00000316308 CCDC151A5D8V7 595 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 MYBL2P10244 700 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 C2orf54Q08AI8 447 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 KIF5AQ12840 1032 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 TDRD12Q587J7 1177 aaKnown RBP16.3■□□□□ 0.2
CLK4-201ENST00000316308 NFRKBQ6P4R8 1299 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 RSBN1LQ6PCB5 846 aaPredicted RBP16.3■□□□□ 0.2
CLK4-201ENST00000316308 ZNF771Q7L3S4 317 aaPredicted RBP16.3■□□□□ 0.2
CLK4-201ENST00000316308 TPH2Q8IWU9 490 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 SYT2Q8N9I0 419 aaPredicted RBP16.3■□□□□ 0.2
CLK4-201ENST00000316308 SECISBP2LQ93073 1101 aaKnown RBP16.3■□□□□ 0.2
CLK4-201ENST00000316308 GMLQ99445 158 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 SH2D4AQ9H788 454 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 DNM3Q9UQ16 869 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.3■□□□□ 0.2
CLK4-201ENST00000316308 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
CLK4-201ENST00000316308 AKAP3O75969 853 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 ARP10275 920 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 NMT1P30419 496 aaKnown RBP16.3■□□□□ 0.2
CLK4-201ENST00000316308 DNA2P51530 1060 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms