RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 PLA2G4BP0C869 781 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 CASP5P51878 434 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 CDKAL1Q5VV42 579 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-202ENST00000315962 ELOA2Q8IYF1 753 aaPredicted RBP8.44□□□□□ -1.06
TRIM55-202ENST00000315962 BANK1Q8NDB2 785 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 ETNPPLQ8TBG4 499 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 ATG4CQ96DT6 458 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 SIPA1L1O43166 1804 aa8.44□□□□□ -1.06
TRIM55-202ENST00000315962 A0A1B0GTH6 734 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 CCDC175P0C221 793 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 TBX2Q13207 712 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 TNFAIP1Q13829 316 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 RSRC2Q7L4I2 434 aaKnown RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 DUSP9Q99956 384 aaKnown RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 KCNMB3Q9NPA1 279 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 RNF181Q9P0P0 153 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 WRAP73Q9P2S5 460 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 RSPH14Q9UHP6 348 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 TELO2Q9Y4R8 837 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 CTDP1Q9Y5B0 961 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 CD2APQ9Y5K6 639 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 ZNF536O15090 1300 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 MYH4Q9Y623 1939 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 AKR1B15C9JRZ8 316 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 CCP110O43303 1012 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 GYPCP04921 128 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 SPATA31C1P0DKV0 1188 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 TNNT3P45378 269 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 USP11P51784 963 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 ZNF280AP59817 542 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 AMPD3Q01432 767 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 PDIA5Q14554 519 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 ENOX2Q16206 610 aaKnown RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 GRIPAP1Q4V328 841 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 LRCH2Q5VUJ6 765 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 TTI2Q6NXR4 508 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 PPFIBP1Q86W92 1011 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 TEX2Q8IWB9 1127 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 GPR161Q8N6U8 529 aaKnown RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 CRACR2AQ9BSW2 395 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 PANK4Q9NVE7 773 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 TESPA1A2RU30 521 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 STX10O60499 249 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 ITGB5P18084 799 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 SREBF1P36956 1147 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 MTIF2P46199 727 aaKnown RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 COPB1P53618 953 aaKnown RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 SPIRE1Q08AE8 756 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 STIM1Q13586 685 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 ARSHQ5FYA8 562 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 PPP1R18Q6NYC8 613 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 BTNL9Q6UXG8 535 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 PRPF38AQ8NAV1 312 aaKnown RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 NOC3LQ8WTT2 800 aaKnown RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 P2RX5Q93086 422 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 TAAR1Q96RJ0 339 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 PICK1Q9NRD5 415 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 FAM207AQ9NSI2 230 aaPredicted RBP8.43□□□□□ -1.06
TRIM55-202ENST00000315962 AGPAT5Q9NUQ2 364 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 GPRC5DQ9NZD1 345 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 GUCA1BQ9UMX6 200 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 ADGRG1Q9Y653 693 aa8.43□□□□□ -1.06
TRIM55-202ENST00000315962 MYO1CO00159 1063 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 RPS6P62753 249 aaKnown RBP8.42□□□□□ -1.06
TRIM55-202ENST00000315962 COASYQ13057 564 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 MKRN3Q13064 507 aaKnown RBP8.42□□□□□ -1.06
TRIM55-202ENST00000315962 FILIP1LQ4L180 1135 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 MTMR14Q8NCE2 650 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 CRYGNQ8WXF5 182 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 DYDC2Q96IM9 177 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 CHP1Q99653 195 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 C7orf25Q9BPX7 421 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 PYM1Q9BRP8 204 aaKnown RBP8.42□□□□□ -1.06
TRIM55-202ENST00000315962 TUBGCP2Q9BSJ2 902 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 ZNF577Q9BSK1 485 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 R3HDMLQ9H3Y0 253 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 IGLV3-22A0A075B6J6 115 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 TRAF5O00463 557 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 KIF5CO60282 957 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 GAS7O60861 476 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 YBX3P16989 372 aaKnown RBP eCLIP8.42□□□□□ -1.06
TRIM55-202ENST00000315962 PTPRAP18433 802 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 ERVK-24P63145 666 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 DNAJC19Q96DA6 116 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 CNOT6LQ96LI5 555 aaKnown RBP8.42□□□□□ -1.06
TRIM55-202ENST00000315962 EIF2AK1Q9BQI3 630 aaKnown RBP8.42□□□□□ -1.06
TRIM55-202ENST00000315962 RUSC1Q9BVN2 902 aa8.42□□□□□ -1.06
TRIM55-202ENST00000315962 RANBP17Q9H2T7 1088 aaKnown RBP8.42□□□□□ -1.06
TRIM55-202ENST00000315962 MAGEC2Q9UBF1 373 aaPredicted RBP8.42□□□□□ -1.06
TRIM55-202ENST00000315962 LRRIQ3A6PVS8 624 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 TULP2O00295 520 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 IPO5O00410 1097 aaKnown RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 TBC1D12O60347 775 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 CTNND1O60716 968 aaKnown RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 PRPF6O94906 941 aaKnown RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 GCFC2P16383 781 aaKnown RBP8.41□□□□□ -1.06
TRIM55-202ENST00000315962 CYP11B2P19099 503 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 KCNJ6P48051 423 aa8.41□□□□□ -1.06
TRIM55-202ENST00000315962 TBC1D8BQ0IIM8 1120 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms