RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 PAGE5Q96GU1 130 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 DYDC2Q96IM9 177 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 NUDCD1Q96RS6 583 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 UBE2TQ9NPD8 197 aaPredicted RBP14.75□□□□□ -0.05
CLCN6-201ENST00000312413 GPR108Q9NPR9 543 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 PPARGC1AQ9UBK2 798 aaKnown RBP14.75□□□□□ -0.05
CLCN6-201ENST00000312413 GGCXP38435 758 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 CDR2Q01850 454 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 OCA2Q04671 838 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 NR5A1Q13285 461 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 THOC5Q13769 683 aaKnown RBP14.75□□□□□ -0.05
CLCN6-201ENST00000312413 ARID5BQ14865 1188 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 CCDC24Q8N4L8 307 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 ZBTB38Q8NAP3 1195 aaPredicted RBP14.75□□□□□ -0.05
CLCN6-201ENST00000312413 TMEM206Q9H813 350 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 EMILIN3Q9NT22 766 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 SEMA3EO15041 775 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 ARL4AP40617 200 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 RWDD2BP57060 319 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 FAM149B1Q96BN6 582 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 GINM1Q9NU53 330 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 SCHIP1Q9P0W5 487 aaPredicted RBP14.75□□□□□ -0.05
CLCN6-201ENST00000312413 ADAMTS1Q9UHI8 967 aa14.75□□□□□ -0.05
CLCN6-201ENST00000312413 DIS3Q9Y2L1 958 aaKnown RBP14.75□□□□□ -0.05
CLCN6-201ENST00000312413 KCNA6P17658 529 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 HDLBPQ00341 1268 aaKnown RBP14.74□□□□□ -0.05
CLCN6-201ENST00000312413 CACNB1Q02641 598 aaPredicted RBP14.74□□□□□ -0.05
CLCN6-201ENST00000312413 CHMP6Q96FZ7 201 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 TRIM15Q9C019 465 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 PYGBP11216 843 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 IFNAR1P17181 557 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 LRRC63Q05C16 580 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 GPATCH4Q5T3I0 446 aaKnown RBP14.74□□□□□ -0.05
CLCN6-201ENST00000312413 RHOT2Q8IXI1 618 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 FBXL13Q8NEE6 735 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 TCOF1Q13428 1488 aaKnown RBP14.74□□□□□ -0.05
CLCN6-201ENST00000312413 ANO9A1A5B4 782 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 TLR3O15455 904 aaKnown RBP14.74□□□□□ -0.05
CLCN6-201ENST00000312413 KRT37O76014 449 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 PCCAP05165 728 aaPredicted RBP14.74□□□□□ -0.05
CLCN6-201ENST00000312413 KCTD6Q8NC69 237 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 GMNCA6NCL1 334 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 TMEM232C9JQI7 657 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 ASPRV1Q53RT3 343 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 DEPDC1BQ8WUY9 529 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 SEPT8Q92599 483 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 CFAP36Q96G28 342 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 OCRLQ01968 901 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 TSTA3Q13630 321 aaPredicted RBP14.74□□□□□ -0.05
CLCN6-201ENST00000312413 RNF169Q8NCN4 708 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 TBCKQ8TEA7 893 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 GIPC2Q8TF65 315 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 KIFC3Q9BVG8 833 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 DNAJC17Q9NVM6 304 aaKnown RBP14.74□□□□□ -0.05
CLCN6-201ENST00000312413 TRPC5Q9UL62 973 aaPredicted RBP14.74□□□□□ -0.05
CLCN6-201ENST00000312413 MRFAP1Q9Y605 127 aa14.74□□□□□ -0.05
CLCN6-201ENST00000312413 MCF2P10911 925 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 BTDP43251 543 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 TMPRSS15P98073 1019 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 KIF22Q14807 665 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 TOGARAM2Q6ZUX3 1019 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 ANKRD36BP1Q96IX9 119 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 MXI1P50539 228 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 MRPS25P82663 173 aaKnown RBP14.73□□□□□ -0.05
CLCN6-201ENST00000312413 TMEM259Q4ZIN3 620 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 BEND6Q5SZJ8 279 aaPredicted RBP14.73□□□□□ -0.05
CLCN6-201ENST00000312413 SRRM1Q8IYB3 904 aaKnown RBP14.73□□□□□ -0.05
CLCN6-201ENST00000312413 IL17REQ8NFR9 667 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 ATP6V0A1Q93050 837 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 AS3MTQ9HBK9 375 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 PTPRTO14522 1441 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 CDC25AP30304 524 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 FAM47EQ6ZV65 393 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 SESTD1Q86VW0 696 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 SLC38A10Q9HBR0 1119 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 H0YIN7 160 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 PDHA1P08559 390 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 PHKA1P46020 1223 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 NR1H3Q13133 447 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 ARHGEF25Q86VW2 580 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 TTC17Q96AE7 1141 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 THOC1Q96FV9 657 aaKnown RBP14.73□□□□□ -0.05
CLCN6-201ENST00000312413 WDR11Q9BZH6 1224 aa14.73□□□□□ -0.05
CLCN6-201ENST00000312413 KCNQ3O43525 872 aa14.72□□□□□ -0.05
CLCN6-201ENST00000312413 SORBS3O60504 671 aa14.72□□□□□ -0.05
CLCN6-201ENST00000312413 PDE8BO95263 885 aa14.72□□□□□ -0.05
CLCN6-201ENST00000312413 ACTN3Q08043 901 aaPredicted RBP14.72□□□□□ -0.05
CLCN6-201ENST00000312413 C16orf87Q6PH81 154 aa14.72□□□□□ -0.05
CLCN6-201ENST00000312413 NACC1Q96RE7 527 aa14.72□□□□□ -0.05
CLCN6-201ENST00000312413 TLR7Q9NYK1 1049 aaKnown RBP14.72□□□□□ -0.05
CLCN6-201ENST00000312413 CAPN11Q9UMQ6 739 aa14.72□□□□□ -0.05
CLCN6-201ENST00000312413 SNX24Q9Y343 169 aa14.72□□□□□ -0.05
CLCN6-201ENST00000312413 NUP153P49790 1475 aaKnown RBP14.72□□□□□ -0.05
CLCN6-201ENST00000312413 RASA4BC9J798 803 aa14.72□□□□□ -0.05
CLCN6-201ENST00000312413 COPEO14579 308 aa14.72□□□□□ -0.05
CLCN6-201ENST00000312413 RASA4O43374 803 aa14.72□□□□□ -0.05
CLCN6-201ENST00000312413 MAN1A2O60476 641 aa14.72□□□□□ -0.05
CLCN6-201ENST00000312413 HSPA4LO95757 839 aa14.72□□□□□ -0.05
CLCN6-201ENST00000312413 TFDP1Q14186 410 aa14.72□□□□□ -0.05
CLCN6-201ENST00000312413 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms