RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PANX2Q96RD6 677 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 TUBGCP2Q9BSJ2 902 aa23.63■■□□□ 1.37
ATG4D-201ENST00000309469 MUTP22033 750 aa23.62■■□□□ 1.37
ATG4D-201ENST00000309469 TKFCQ3LXA3 575 aa23.62■■□□□ 1.37
ATG4D-201ENST00000309469 SNRNP48Q6IEG0 339 aaKnown RBP23.62■■□□□ 1.37
ATG4D-201ENST00000309469 RBM46Q8TBY0 533 aaKnown RBP23.62■■□□□ 1.37
ATG4D-201ENST00000309469 ZNF507Q8TCN5 953 aa23.62■■□□□ 1.37
ATG4D-201ENST00000309469 CPLX3Q8WVH0 158 aa23.62■■□□□ 1.37
ATG4D-201ENST00000309469 JADE2Q9NQC1 790 aa23.62■■□□□ 1.37
ATG4D-201ENST00000309469 TBC1D7Q9P0N9 293 aa23.62■■□□□ 1.37
ATG4D-201ENST00000309469 ZNF214Q9UL59 606 aaPredicted RBP23.62■■□□□ 1.37
ATG4D-201ENST00000309469 PHIPQ8WWQ0 1821 aa23.62■■□□□ 1.37
ATG4D-201ENST00000309469 ARHGAP6O43182 974 aa23.61■■□□□ 1.37
ATG4D-201ENST00000309469 FGFR1OPO95684 399 aaKnown RBP23.61■■□□□ 1.37
ATG4D-201ENST00000309469 TNNT1P13805 278 aa23.61■■□□□ 1.37
ATG4D-201ENST00000309469 EIF2AK2P19525 551 aaKnown RBP23.61■■□□□ 1.37
ATG4D-201ENST00000309469 PGM5Q15124 567 aa23.61■■□□□ 1.37
ATG4D-201ENST00000309469 RMDN3Q96TC7 470 aa23.61■■□□□ 1.37
ATG4D-201ENST00000309469 TSG101Q99816 390 aa23.61■■□□□ 1.37
ATG4D-201ENST00000309469 REEP2Q9BRK0 252 aa23.61■■□□□ 1.37
ATG4D-201ENST00000309469 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.61■■□□□ 1.37
ATG4D-201ENST00000309469 ATP2A1O14983 1001 aa23.61■■□□□ 1.37
ATG4D-201ENST00000309469 PPP1R12BO60237 982 aaPredicted RBP23.61■■□□□ 1.37
ATG4D-201ENST00000309469 GYPCP04921 128 aa23.61■■□□□ 1.37
ATG4D-201ENST00000309469 PRKCSHP14314 528 aaPredicted RBP23.61■■□□□ 1.37
ATG4D-201ENST00000309469 TMEM132BQ14DG7 1078 aa23.61■■□□□ 1.37
ATG4D-201ENST00000309469 FGFBP2Q9BYJ0 223 aa23.61■■□□□ 1.37
ATG4D-201ENST00000309469 ZHX3Q9H4I2 956 aa23.61■■□□□ 1.37
ATG4D-201ENST00000309469 AGO4Q9HCK5 861 aaKnown RBP23.61■■□□□ 1.37
ATG4D-201ENST00000309469 PXMP2Q9NR77 195 aa23.61■■□□□ 1.37
ATG4D-201ENST00000309469 HOXC10Q9NYD6 342 aa23.61■■□□□ 1.37
ATG4D-201ENST00000309469 A0A1W2PQC6 194 aa23.6■■□□□ 1.37
ATG4D-201ENST00000309469 TPM1P09493 284 aa23.6■■□□□ 1.37
ATG4D-201ENST00000309469 CASP14P31944 242 aa23.6■■□□□ 1.37
ATG4D-201ENST00000309469 MTIF2P46199 727 aaKnown RBP23.6■■□□□ 1.37
ATG4D-201ENST00000309469 DNM2P50570 870 aa23.6■■□□□ 1.37
ATG4D-201ENST00000309469 BAATQ14032 418 aaPredicted RBP23.6■■□□□ 1.37
ATG4D-201ENST00000309469 NYAP1Q6ZVC0 841 aa23.6■■□□□ 1.37
ATG4D-201ENST00000309469 PIGOQ8TEQ8 1089 aa23.6■■□□□ 1.37
ATG4D-201ENST00000309469 PDCD2LQ9BRP1 358 aa23.6■■□□□ 1.37
ATG4D-201ENST00000309469 PARP14Q460N5 1801 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 UTRNP46939 3433 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 UQCRHLA0A096LP55 91 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 PES1O00541 588 aaKnown RBP23.59■■□□□ 1.37
ATG4D-201ENST00000309469 MFAP3LO75121 409 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 KIF20AO95235 890 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 UQCRHP07919 91 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 TRIM14Q14142 442 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 PTPN14Q15678 1187 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 ARHGEF16Q5VV41 709 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 DPY19L2Q6NUT2 758 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 CNGA4Q8IV77 575 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 PPP1R13BQ96KQ4 1090 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 RUSC1Q9BVN2 902 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 PKD2L1Q9P0L9 805 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 CSADQ9Y600 493 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 MYPNQ86TC9 1320 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 B4DLN1 442 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 DHX15O43143 795 aaKnown RBP23.59■■□□□ 1.37
ATG4D-201ENST00000309469 FXR1P51114 621 aaKnown RBP eCLIP23.59■■□□□ 1.37
ATG4D-201ENST00000309469 MTMR1Q13613 665 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 ZCWPW2Q504Y3 356 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 RINT1Q6NUQ1 792 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 CCDC51Q96ER9 411 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 PURBQ96QR8 312 aaKnown RBP23.59■■□□□ 1.37
ATG4D-201ENST00000309469 NACC1Q96RE7 527 aa23.59■■□□□ 1.37
ATG4D-201ENST00000309469 RLFQ13129 1914 aa23.58■■□□□ 1.37
ATG4D-201ENST00000309469 DDX39AO00148 427 aaKnown RBP23.58■■□□□ 1.37
ATG4D-201ENST00000309469 CCP110O43303 1012 aa23.58■■□□□ 1.37
ATG4D-201ENST00000309469 MYCLP12524 364 aaPredicted RBP23.58■■□□□ 1.37
ATG4D-201ENST00000309469 SCFD1Q8WVM8 642 aa23.58■■□□□ 1.37
ATG4D-201ENST00000309469 TEX13BQ9BXU2 312 aa23.58■■□□□ 1.37
ATG4D-201ENST00000309469 SPDYE16A6NNV3 312 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-201ENST00000309469 ITGB3BPQ13352 177 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-201ENST00000309469 LRRC55Q6ZSA7 311 aa23.57■■□□□ 1.36
ATG4D-201ENST00000309469 NEK9Q8TD19 979 aa23.57■■□□□ 1.36
ATG4D-201ENST00000309469 NOC4LQ9BVI4 516 aaKnown RBP23.57■■□□□ 1.36
ATG4D-201ENST00000309469 WRAP73Q9P2S5 460 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-201ENST00000309469 IREB2P48200 963 aaKnown RBP23.57■■□□□ 1.36
ATG4D-201ENST00000309469 MIIPQ5JXC2 388 aa23.57■■□□□ 1.36
ATG4D-201ENST00000309469 XRRA1Q6P2D8 792 aa23.57■■□□□ 1.36
ATG4D-201ENST00000309469 USP50Q70EL3 339 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-201ENST00000309469 MIER3Q7Z3K6 550 aa23.57■■□□□ 1.36
ATG4D-201ENST00000309469 SFR1Q86XK3 245 aa23.57■■□□□ 1.36
ATG4D-201ENST00000309469 L3MBTL3Q96JM7 780 aaPredicted RBP23.57■■□□□ 1.36
ATG4D-201ENST00000309469 NAA15Q9BXJ9 866 aaKnown RBP23.57■■□□□ 1.36
ATG4D-201ENST00000309469 TBC1D22BQ9NU19 505 aa23.57■■□□□ 1.36
ATG4D-201ENST00000309469 POLR2AP24928 1970 aaKnown RBP23.56■■□□□ 1.36
ATG4D-201ENST00000309469 RBBP6Q7Z6E9 1792 aaKnown RBP23.56■■□□□ 1.36
ATG4D-201ENST00000309469 ZBTB39O15060 712 aa23.56■■□□□ 1.36
ATG4D-201ENST00000309469 FKBP3Q00688 224 aaKnown RBP23.56■■□□□ 1.36
ATG4D-201ENST00000309469 TBC1D8BQ0IIM8 1120 aa23.56■■□□□ 1.36
ATG4D-201ENST00000309469 NELFCDQ8IXH7 590 aa23.56■■□□□ 1.36
ATG4D-201ENST00000309469 CNKSR2Q8WXI2 1034 aa23.56■■□□□ 1.36
ATG4D-201ENST00000309469 LXNQ9BS40 222 aa23.56■■□□□ 1.36
ATG4D-201ENST00000309469 TBCAO75347 108 aaKnown RBP23.55■■□□□ 1.36
ATG4D-201ENST00000309469 C1orf186Q6ZWK4 172 aa23.55■■□□□ 1.36
ATG4D-201ENST00000309469 MYRIPQ8NFW9 859 aa23.55■■□□□ 1.36
ATG4D-201ENST00000309469 KCTD10Q9H3F6 313 aa23.55■■□□□ 1.36
ATG4D-201ENST00000309469 COL4A3BPQ9Y5P4 624 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms