RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 KLHL34Q8N239 644 aa16.02■□□□□ 0.16
PTPN9-201ENST00000306726 DDX12PQ92771 950 aa16.02■□□□□ 0.16
PTPN9-201ENST00000306726 RAB21Q9UL25 225 aa16.02■□□□□ 0.16
PTPN9-201ENST00000306726 USP17L5A8MUK1 530 aa16.02■□□□□ 0.15
PTPN9-201ENST00000306726 GPSM2P81274 684 aa16.02■□□□□ 0.15
PTPN9-201ENST00000306726 CCDC38Q502W7 563 aa16.02■□□□□ 0.15
PTPN9-201ENST00000306726 GJB7Q6PEY0 223 aa16.02■□□□□ 0.15
PTPN9-201ENST00000306726 OTUD6AQ7L8S5 288 aa16.02■□□□□ 0.15
PTPN9-201ENST00000306726 CEP89Q96ST8 783 aa16.02■□□□□ 0.15
PTPN9-201ENST00000306726 PCDHA6Q9UN73 950 aa16.02■□□□□ 0.15
PTPN9-201ENST00000306726 PCDHA8Q9Y5H6 950 aa16.02■□□□□ 0.15
PTPN9-201ENST00000306726 LTBP1Q14766 1721 aa16.02■□□□□ 0.15
PTPN9-201ENST00000306726 EP400Q96L91 3159 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 LRRN2O75325 713 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 EEF1GP26641 437 aaKnown RBP16.01■□□□□ 0.15
PTPN9-201ENST00000306726 KLRC1P26715 233 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 HDLBPQ00341 1268 aaKnown RBP16.01■□□□□ 0.15
PTPN9-201ENST00000306726 RPS6KA1Q15418 735 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 TMEM47Q9BQJ4 181 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 PTPN22Q9Y2R2 807 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 MYH10P35580 1976 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 MYMKA6NI61 221 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 USP17L15C9J2P7 530 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 USP17L13C9JLJ4 530 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 USP17L11C9JVI0 530 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 USP17L18D6R9N7 530 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 USP17L22D6RA61 530 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 USP17L17D6RBQ6 530 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 USP17L19D6RCP7 530 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 USP17L20D6RJB6 530 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 NR1D1P20393 614 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 CHRNA5P30532 468 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 MAP2K2P36507 400 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 USP17L24Q0WX57 530 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 USP17L6PQ6QN14 398 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 CAPN12Q6ZSI9 719 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 FBXO33Q7Z6M2 555 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 NEK8Q86SG6 692 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 TAB3Q8N5C8 712 aaPredicted RBP16.01■□□□□ 0.15
PTPN9-201ENST00000306726 COA1Q9GZY4 146 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 AMACRQ9UHK6 382 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 A0A087WUV0 522 aaPredicted RBP16.01■□□□□ 0.15
PTPN9-201ENST00000306726 KRIT1O00522 736 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 CLTAP09496 248 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 CORO7P57737 925 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 GRIK5Q16478 980 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 VWA3BQ502W6 1294 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 NAALADL2Q58DX5 795 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 NT5DC1Q5TFE4 455 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 TBC1D16Q8TBP0 767 aa16.01■□□□□ 0.15
PTPN9-201ENST00000306726 TCP11Q8WWU5 503 aa16■□□□□ 0.15
PTPN9-201ENST00000306726 DUSP9Q99956 384 aaKnown RBP16■□□□□ 0.15
PTPN9-201ENST00000306726 ZC3H12CQ9C0D7 883 aaKnown RBP16■□□□□ 0.15
PTPN9-201ENST00000306726 IKZF4Q9H2S9 585 aa16■□□□□ 0.15
PTPN9-201ENST00000306726 LUC7LQ9NQ29 371 aaKnown RBP16■□□□□ 0.15
PTPN9-201ENST00000306726 LTBP3Q9NS15 1303 aa16■□□□□ 0.15
PTPN9-201ENST00000306726 PHF20L1A8MW92 1017 aa16■□□□□ 0.15
PTPN9-201ENST00000306726 DDX39AO00148 427 aaKnown RBP16■□□□□ 0.15
PTPN9-201ENST00000306726 CDC25CP30307 473 aa16■□□□□ 0.15
PTPN9-201ENST00000306726 ZYXQ15942 572 aaKnown RBP16■□□□□ 0.15
PTPN9-201ENST00000306726 RETREG2Q8NC44 543 aa16■□□□□ 0.15
PTPN9-201ENST00000306726 LARP4BQ92615 738 aaKnown RBP16■□□□□ 0.15
PTPN9-201ENST00000306726 PPP1R12BO60237 982 aaPredicted RBP16■□□□□ 0.15
PTPN9-201ENST00000306726 AMPD2Q01433 879 aa16■□□□□ 0.15
PTPN9-201ENST00000306726 NAA25Q14CX7 972 aa16■□□□□ 0.15
PTPN9-201ENST00000306726 ALX1Q15699 326 aa16■□□□□ 0.15
PTPN9-201ENST00000306726 FAM133BQ5BKY9 247 aaKnown RBP16■□□□□ 0.15
PTPN9-201ENST00000306726 GPBP1Q86WP2 473 aa16■□□□□ 0.15
PTPN9-201ENST00000306726 C7orf43Q8WVR3 580 aa16■□□□□ 0.15
PTPN9-201ENST00000306726 HNRNPLLQ8WVV9 542 aaKnown RBP16■□□□□ 0.15
PTPN9-201ENST00000306726 SEMA6BQ9H3T3 888 aa16■□□□□ 0.15
PTPN9-201ENST00000306726 STK38LQ9Y2H1 464 aa16■□□□□ 0.15
PTPN9-201ENST00000306726 ADAM9Q13443 819 aa15.99■□□□□ 0.15
PTPN9-201ENST00000306726 EFCAB13Q8IY85 973 aa15.99■□□□□ 0.15
PTPN9-201ENST00000306726 PRPF6O94906 941 aaKnown RBP15.99■□□□□ 0.15
PTPN9-201ENST00000306726 ZKSCAN8Q15776 578 aaPredicted RBP15.99■□□□□ 0.15
PTPN9-201ENST00000306726 TTBK2Q6IQ55 1244 aa15.99■□□□□ 0.15
PTPN9-201ENST00000306726 TTI2Q6NXR4 508 aa15.99■□□□□ 0.15
PTPN9-201ENST00000306726 PEX26Q7Z412 305 aa15.99■□□□□ 0.15
PTPN9-201ENST00000306726 ANKRD42Q8N9B4 389 aa15.99■□□□□ 0.15
PTPN9-201ENST00000306726 TBC1D22AQ8WUA7 517 aa15.99■□□□□ 0.15
PTPN9-201ENST00000306726 KAT2BQ92831 832 aa15.99■□□□□ 0.15
PTPN9-201ENST00000306726 MYO1AQ9UBC5 1043 aa15.99■□□□□ 0.15
PTPN9-201ENST00000306726 GCOM1H8Y6P7 765 aaPredicted RBP15.99■□□□□ 0.15
PTPN9-201ENST00000306726 MYZAPP0CAP1 466 aa15.99■□□□□ 0.15
PTPN9-201ENST00000306726 PBX1P40424 430 aa15.99■□□□□ 0.15
PTPN9-201ENST00000306726 ASIC2Q16515 512 aa15.99■□□□□ 0.15
PTPN9-201ENST00000306726 WDR66Q8TBY9 1149 aa15.99■□□□□ 0.15
PTPN9-201ENST00000306726 PANK4Q9NVE7 773 aa15.99■□□□□ 0.15
PTPN9-201ENST00000306726 HNRNPH1P31943 449 aaKnown RBP15.98■□□□□ 0.15
PTPN9-201ENST00000306726 PAK2Q13177 524 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 LRRC15Q8TF66 581 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 KCNK9Q9NPC2 374 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 AGPSO00116 658 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 PSMD14O00487 310 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 DAPK3O43293 454 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 GFPT2O94808 682 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 ERFP50548 548 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 TTMPQ5BVD1 217 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 MYOCDQ8IZQ8 938 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms