RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 PGRMC1O00264 195 aaKnown RBP16.04■□□□□ 0.16
COL6A2-201ENST00000300527 CAND2O75155 1236 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 TDP2O95551 362 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 ABCB4P21439 1286 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 SLC35G1Q2M3R5 365 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 DZIP1Q86YF9 867 aaKnown RBP16.04■□□□□ 0.16
COL6A2-201ENST00000300527 METTL13Q8N6R0 699 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 PSMD1Q99460 953 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 FGFBP2Q9BYJ0 223 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 A1CFQ9NQ94 594 aaKnown RBP16.04■□□□□ 0.16
COL6A2-201ENST00000300527 SLC12A6Q9UHW9 1150 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 KIF1AQ12756 1690 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 SSU72P8A0A1W2PR75 194 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 MMEP08473 750 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 CYP19A1P11511 503 aaPredicted RBP16.03■□□□□ 0.16
COL6A2-201ENST00000300527 GRB10Q13322 594 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 ASTE1Q2TB18 679 aaPredicted RBP16.03■□□□□ 0.16
COL6A2-201ENST00000300527 UNC13DQ70J99 1090 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 MREGQ8N565 214 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 DYDC1Q8WWB3 177 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 RSRC1Q96IZ7 334 aaKnown RBP16.03■□□□□ 0.16
COL6A2-201ENST00000300527 CEP72Q9P209 647 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 DISP2A7MBM2 1401 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 KRT13P13646 458 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 GCKP35557 465 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 PTK2Q05397 1052 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 ZNF211Q13398 564 aaPredicted RBP16.03■□□□□ 0.16
COL6A2-201ENST00000300527 NSMCE1Q8WV22 266 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 CUEDC2Q9H467 287 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 SEC63Q9UGP8 760 aaKnown RBP16.03■□□□□ 0.16
COL6A2-201ENST00000300527 ATXN2Q99700 1313 aaKnown RBP16.03■□□□□ 0.16
COL6A2-201ENST00000300527 TRIM37O94972 964 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 CHN1P15882 459 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 PLTPP55058 493 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 TMEM266Q2M3C6 531 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 KRT79Q5XKE5 535 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 CCDC25Q86WR0 208 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 MICAL1Q8TDZ2 1067 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 CHMP6Q96FZ7 201 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 TRIM6Q9C030 488 aaPredicted RBP16.03■□□□□ 0.16
COL6A2-201ENST00000300527 IL17RBQ9NRM6 502 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 BLOC1S4Q9NUP1 217 aa16.03■□□□□ 0.16
COL6A2-201ENST00000300527 SPDYE3A6NKU9 549 aa16.02■□□□□ 0.16
COL6A2-201ENST00000300527 LRRC14Q15048 493 aa16.02■□□□□ 0.16
COL6A2-201ENST00000300527 PLCB4Q15147 1175 aa16.02■□□□□ 0.16
COL6A2-201ENST00000300527 HERC4Q5GLZ8 1057 aaPredicted RBP16.02■□□□□ 0.16
COL6A2-201ENST00000300527 TEX11Q8IYF3 940 aa16.02■□□□□ 0.16
COL6A2-201ENST00000300527 KIF2BQ8N4N8 673 aa16.02■□□□□ 0.16
COL6A2-201ENST00000300527 ANKS4BQ8N8V4 417 aa16.02■□□□□ 0.16
COL6A2-201ENST00000300527 U2AF1L4Q8WU68 220 aaKnown RBP16.02■□□□□ 0.16
COL6A2-201ENST00000300527 COA7Q96BR5 231 aa16.02■□□□□ 0.16
COL6A2-201ENST00000300527 C6orf50Q9HD87 102 aa16.02■□□□□ 0.16
COL6A2-201ENST00000300527 UTP11Q9Y3A2 253 aaKnown RBP16.02■□□□□ 0.16
COL6A2-201ENST00000300527 USP54Q70EL1 1684 aa16.02■□□□□ 0.16
COL6A2-201ENST00000300527 NOL4O94818 638 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 LCA5LO95447 670 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 SHBGP04278 402 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 SLC9A1P19634 815 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 LRRC55Q6ZSA7 311 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 CCDC50Q8IVM0 306 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 XPO6Q96QU8 1125 aaKnown RBP16.02■□□□□ 0.15
COL6A2-201ENST00000300527 BARHL2Q9NY43 387 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.02■□□□□ 0.15
COL6A2-201ENST00000300527 LMTK3Q96Q04 1460 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 ATP6V1G2O95670 118 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 FGGP02679 453 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 SLC8A1P32418 973 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 EIF6P56537 245 aaKnown RBP16.02■□□□□ 0.15
COL6A2-201ENST00000300527 ELF3P78545 371 aaPredicted RBP16.02■□□□□ 0.15
COL6A2-201ENST00000300527 FKBP3Q00688 224 aaKnown RBP16.02■□□□□ 0.15
COL6A2-201ENST00000300527 BIRC3Q13489 604 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 CUL1Q13616 776 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 MAEAQ7L5Y9 396 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 KRT25Q7Z3Z0 450 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 GUF1Q8N442 669 aaKnown RBP16.02■□□□□ 0.15
COL6A2-201ENST00000300527 TATDN2Q93075 761 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 PIGSQ96S52 555 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 SAMD15Q9P1V8 674 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 MAD2L2Q9UI95 211 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 SNX24Q9Y343 169 aa16.02■□□□□ 0.15
COL6A2-201ENST00000300527 FRMPD2Q68DX3 1309 aaPredicted RBP16.01■□□□□ 0.15
COL6A2-201ENST00000300527 PPP1R2P41236 205 aa16.01■□□□□ 0.15
COL6A2-201ENST00000300527 BYSLQ13895 437 aaKnown RBP16.01■□□□□ 0.15
COL6A2-201ENST00000300527 FAM26FQ5R3K3 315 aa16.01■□□□□ 0.15
COL6A2-201ENST00000300527 OTUD6AQ7L8S5 288 aa16.01■□□□□ 0.15
COL6A2-201ENST00000300527 IQCDQ96DY2 449 aa16.01■□□□□ 0.15
COL6A2-201ENST00000300527 AK8Q96MA6 479 aa16.01■□□□□ 0.15
COL6A2-201ENST00000300527 AZI2Q9H6S1 392 aa16.01■□□□□ 0.15
COL6A2-201ENST00000300527 PANK4Q9NVE7 773 aa16.01■□□□□ 0.15
COL6A2-201ENST00000300527 TMEM110-MUSTN1A8MSY1 372 aa16.01■□□□□ 0.15
COL6A2-201ENST00000300527 UPP2O95045 317 aa16.01■□□□□ 0.15
COL6A2-201ENST00000300527 ECHS1P30084 290 aa16.01■□□□□ 0.15
COL6A2-201ENST00000300527 DRP2Q13474 957 aa16.01■□□□□ 0.15
COL6A2-201ENST00000300527 ALKBH5Q6P6C2 394 aaKnown RBP16.01■□□□□ 0.15
COL6A2-201ENST00000300527 LRRC34Q8IZ02 419 aa16.01■□□□□ 0.15
COL6A2-201ENST00000300527 GLG1Q92896 1179 aa16.01■□□□□ 0.15
COL6A2-201ENST00000300527 DDX60Q8IY21 1712 aaKnown RBP16.01■□□□□ 0.15
COL6A2-201ENST00000300527 H0YGN5 161 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 SLC37A4O43826 429 aa16■□□□□ 0.15
COL6A2-201ENST00000300527 DRD4P21917 467 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms