RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 SPICE1Q8N0Z3 855 aa10.28□□□□□ -0.76
CLRN1-201ENST00000295911 ACER1Q8TDN7 264 aa10.28□□□□□ -0.76
CLRN1-201ENST00000295911 ANKRD7Q92527 254 aa10.28□□□□□ -0.76
CLRN1-201ENST00000295911 DNAJC19Q96DA6 116 aa10.28□□□□□ -0.76
CLRN1-201ENST00000295911 ZFRQ96KR1 1074 aaKnown RBP10.28□□□□□ -0.76
CLRN1-201ENST00000295911 CNOT6LQ96LI5 555 aaKnown RBP10.28□□□□□ -0.76
CLRN1-201ENST00000295911 NOC4LQ9BVI4 516 aaKnown RBP10.28□□□□□ -0.76
CLRN1-201ENST00000295911 SEMA6BQ9H3T3 888 aa10.28□□□□□ -0.76
CLRN1-201ENST00000295911 MYOZ2Q9NPC6 264 aa10.28□□□□□ -0.76
CLRN1-201ENST00000295911 PNMA2Q9UL42 364 aa10.28□□□□□ -0.76
CLRN1-201ENST00000295911 DNM3Q9UQ16 869 aa10.28□□□□□ -0.76
CLRN1-201ENST00000295911 ADGRG1Q9Y653 693 aa10.28□□□□□ -0.76
CLRN1-201ENST00000295911 A0A1W2PQJ5 194 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 SOWAHDA6NJG2 315 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 WNT10BO00744 389 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 ZMYND10O75800 440 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 GNA14O95837 355 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 MUTP22033 750 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 ZNF280AP59817 542 aaPredicted RBP10.27□□□□□ -0.77
CLRN1-201ENST00000295911 COASYQ13057 564 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 TUBB2AQ13885 445 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 ECM1Q16610 540 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 FAM26FQ5R3K3 315 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 KCNK18Q7Z418 384 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 CCDC84Q86UT8 332 aaPredicted RBP10.27□□□□□ -0.77
CLRN1-201ENST00000295911 SAMD3Q8N6K7 520 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 ZNF397Q8NF99 534 aaPredicted RBP10.27□□□□□ -0.77
CLRN1-201ENST00000295911 CEP63Q96MT8 703 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 ERGIC2Q96RQ1 377 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 POLR3CQ9BUI4 534 aaPredicted RBP10.27□□□□□ -0.77
CLRN1-201ENST00000295911 TUBB2BQ9BVA1 445 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 TMEM39BQ9GZU3 492 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 DEFB129Q9H1M3 183 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 ZNHIT6Q9NWK9 470 aaKnown RBP10.27□□□□□ -0.77
CLRN1-201ENST00000295911 PGAP2Q9UHJ9 254 aa10.27□□□□□ -0.77
CLRN1-201ENST00000295911 B4DLN1 442 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 FAM86B1E9PN63 330 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 OPLAHO14841 1288 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 KIF5CO60282 957 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 SSBP05455 408 aaKnown RBP eCLIP10.26□□□□□ -0.77
CLRN1-201ENST00000295911 KRT18P05783 430 aaKnown RBP10.26□□□□□ -0.77
CLRN1-201ENST00000295911 FAM86B2P0C5J1 330 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 OSBPP22059 807 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 GNG11P61952 73 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 ZBED6P86452 979 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 FKBP3Q00688 224 aaKnown RBP10.26□□□□□ -0.77
CLRN1-201ENST00000295911 SPIRE1Q08AE8 756 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 MAN2A1Q16706 1144 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 VWA3BQ502W6 1294 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 NCAPH2Q6IBW4 605 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 RAD9BQ6WBX8 426 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 ARHGAP27Q6ZUM4 889 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 GPBP1Q86WP2 473 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 SYT2Q8N9I0 419 aaPredicted RBP10.26□□□□□ -0.77
CLRN1-201ENST00000295911 LPAR1Q92633 364 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 KIFC2Q96AC6 838 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 LENG9Q96B70 501 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 P2RX7Q99572 595 aaKnown RBP10.26□□□□□ -0.77
CLRN1-201ENST00000295911 DNAJC7Q99615 494 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 MTFR1LQ9H019 292 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 CGNQ9P2M7 1197 aaKnown RBP10.26□□□□□ -0.77
CLRN1-201ENST00000295911 MYO1AQ9UBC5 1043 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 DOCK1Q14185 1865 aa10.26□□□□□ -0.77
CLRN1-201ENST00000295911 LTBP3Q9NS15 1303 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 TTC26A0AVF1 554 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 FRMD3A2A2Y4 597 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 SOWAHBA6NEL2 793 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 POTECB2RU33 542 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 E9PMD0 336 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 MSH4O15457 936 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 MED24O75448 989 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 URI1O94763 535 aaPredicted RBP10.25□□□□□ -0.77
CLRN1-201ENST00000295911 CFBP00751 764 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 CYP11B2P19099 503 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 TRIM21P19474 475 aaKnown RBP10.25□□□□□ -0.77
CLRN1-201ENST00000295911 HOXA13P31271 388 aaPredicted RBP10.25□□□□□ -0.77
CLRN1-201ENST00000295911 SLC12A3P55017 1021 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 CDK17Q00537 523 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 NCBP1Q09161 790 aaKnown RBP10.25□□□□□ -0.77
CLRN1-201ENST00000295911 MIIPQ5JXC2 388 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 KIAA1755Q5JYT7 1200 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 MIGA2Q7L4E1 593 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 KRT26Q7Z3Y9 468 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 CATSPER3Q86XQ3 398 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 HPS3Q969F9 1004 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 HOOK2Q96ED9 719 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 PCMTD1Q96MG8 357 aaPredicted RBP10.25□□□□□ -0.77
CLRN1-201ENST00000295911 FEZ1Q99689 392 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 WDR11Q9BZH6 1224 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 EDEM3Q9BZQ6 932 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 TUFT1Q9NNX1 390 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 MAP3K20Q9NYL2 800 aaKnown RBP10.25□□□□□ -0.77
CLRN1-201ENST00000295911 ZNF215Q9UL58 517 aaPredicted RBP10.25□□□□□ -0.77
CLRN1-201ENST00000295911 PARP14Q460N5 1801 aa10.25□□□□□ -0.77
CLRN1-201ENST00000295911 IGLV3-22A0A075B6J6 115 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 PHF20L1A8MW92 1017 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 WDR46O15213 610 aaKnown RBP10.24□□□□□ -0.77
CLRN1-201ENST00000295911 CTNND1O60716 968 aaKnown RBP10.24□□□□□ -0.77
CLRN1-201ENST00000295911 EYA4O95677 639 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 SPATA31C1P0DKV0 1188 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms