RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 PEX26Q7Z412 305 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 ANKS1AQ92625 1134 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 MAGEF1Q9HAY2 307 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 MCM9Q9NXL9 1143 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.23□□□□□ -0.61
LMX1A-201ENST00000294816 FER1L4A9Z1Z3 1794 aa11.23□□□□□ -0.61
LMX1A-201ENST00000294816 CAND2O75155 1236 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 ECHS1P30084 290 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 NONOQ15233 471 aaKnown RBP eCLIP11.22□□□□□ -0.61
LMX1A-201ENST00000294816 AGBL2Q5U5Z8 902 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 STK38LQ9Y2H1 464 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 UTP11Q9Y3A2 253 aaKnown RBP11.22□□□□□ -0.61
LMX1A-201ENST00000294816 ATF3P18847 181 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 SOGA3Q5TF21 947 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 TMED8Q6PL24 325 aaPredicted RBP11.22□□□□□ -0.61
LMX1A-201ENST00000294816 METTL13Q8N6R0 699 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 CCDC26Q8TAB7 109 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 LARP4BQ92615 738 aaKnown RBP11.22□□□□□ -0.61
LMX1A-201ENST00000294816 BIN2Q9UBW5 565 aaPredicted RBP11.22□□□□□ -0.61
LMX1A-201ENST00000294816 PCDHGC5Q9Y5F6 944 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 COL4A3BPQ9Y5P4 624 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 SRRM3A6NNA2 597 aaPredicted RBP11.22□□□□□ -0.61
LMX1A-201ENST00000294816 F8W031 263 aaPredicted RBP11.22□□□□□ -0.61
LMX1A-201ENST00000294816 IL2RBP14784 551 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 CALRP27797 417 aaKnown RBP11.22□□□□□ -0.61
LMX1A-201ENST00000294816 COPB2P35606 906 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 SLCO1A2P46721 670 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 CCNHP51946 323 aaPredicted RBP11.22□□□□□ -0.61
LMX1A-201ENST00000294816 CACNB1Q02641 598 aaPredicted RBP11.22□□□□□ -0.61
LMX1A-201ENST00000294816 NBPF9Q3BBW0 867 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 UNC13DQ70J99 1090 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 ARMC9Q7Z3E5 817 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 C1orf131Q8NDD1 294 aaKnown RBP11.22□□□□□ -0.61
LMX1A-201ENST00000294816 AK8Q96MA6 479 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 BRIP1Q9BX63 1249 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 KDM4CQ9H3R0 1056 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 MKNK2Q9HBH9 465 aa11.22□□□□□ -0.61
LMX1A-201ENST00000294816 CAMTA1Q9Y6Y1 1673 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 TIAM2Q8IVF5 1701 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 USP17L3A6NCW0 530 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 USP17L4A6NCW7 530 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 POTEMA6NI47 508 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 MGRN1O60291 552 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 DNAJC8O75937 253 aaPredicted RBP11.21□□□□□ -0.61
LMX1A-201ENST00000294816 ANP32DO95626 131 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 ACTN1P12814 892 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 USP17L1Q7RTZ2 530 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 TMC3Q7Z5M5 1100 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 LRRC34Q8IZ02 419 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 MYOCDQ8IZQ8 938 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 GUF1Q8N442 669 aaKnown RBP11.21□□□□□ -0.61
LMX1A-201ENST00000294816 C3orf20Q8ND61 904 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 MGARPQ8TDB4 240 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 DYDC1Q8WWB3 177 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 DYNLL2Q96FJ2 89 aa11.21□□□□□ -0.61
LMX1A-201ENST00000294816 CRNKL1Q9BZJ0 848 aaKnown RBP11.21□□□□□ -0.61
LMX1A-201ENST00000294816 SMCO2A6NFE2 343 aa11.21□□□□□ -0.62
LMX1A-201ENST00000294816 DIAPH2O60879 1101 aa11.21□□□□□ -0.62
LMX1A-201ENST00000294816 USP17L8P0C7I0 530 aa11.21□□□□□ -0.62
LMX1A-201ENST00000294816 EVA1CP58658 441 aa11.21□□□□□ -0.62
LMX1A-201ENST00000294816 SARNPP82979 210 aaKnown RBP11.21□□□□□ -0.62
LMX1A-201ENST00000294816 BIRC2Q13490 618 aa11.21□□□□□ -0.62
LMX1A-201ENST00000294816 LACTB2Q53H82 288 aaPredicted RBP11.21□□□□□ -0.62
LMX1A-201ENST00000294816 SUSD4Q5VX71 490 aa11.21□□□□□ -0.62
LMX1A-201ENST00000294816 SNX29Q8TEQ0 813 aa11.21□□□□□ -0.62
LMX1A-201ENST00000294816 PIGBQ92521 554 aa11.21□□□□□ -0.62
LMX1A-201ENST00000294816 DDX12PQ92771 950 aa11.21□□□□□ -0.62
LMX1A-201ENST00000294816 PBKQ96KB5 322 aa11.21□□□□□ -0.62
LMX1A-201ENST00000294816 NUCKS1Q9H1E3 243 aaKnown RBP11.21□□□□□ -0.62
LMX1A-201ENST00000294816 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.21□□□□□ -0.62
LMX1A-201ENST00000294816 F8VZ95 297 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 LAD1O00515 517 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 NOL4O94818 638 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 USP11P51784 963 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 LRRC63Q05C16 580 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 TLDC1Q6P9B6 456 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 LRRC55Q6ZSA7 311 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 NEK8Q86SG6 692 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 TBCKQ8TEA7 893 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 FMO2Q99518 471 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.2□□□□□ -0.62
LMX1A-201ENST00000294816 FAM129AQ9BZQ8 928 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 AZI2Q9H6S1 392 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 INTS9Q9NV88 658 aaKnown RBP11.2□□□□□ -0.62
LMX1A-201ENST00000294816 BAZ2AQ9UIF9 1905 aaKnown RBP11.2□□□□□ -0.62
LMX1A-201ENST00000294816 C5orf60A6NFR6 353 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 SPDYE3A6NKU9 549 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 ENO4A6NNW6 628 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 SHBGP04278 402 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 FKBP3Q00688 224 aaKnown RBP11.2□□□□□ -0.62
LMX1A-201ENST00000294816 PTK2Q05397 1052 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 CCDC152Q4G0S7 254 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 HOOK3Q86VS8 718 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 KIF2BQ8N4N8 673 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 PRCCQ92733 491 aaPredicted RBP11.2□□□□□ -0.62
LMX1A-201ENST00000294816 PRMT1Q99873 361 aaKnown RBP11.2□□□□□ -0.62
LMX1A-201ENST00000294816 MMTAG2Q9BU76 263 aaKnown RBP11.2□□□□□ -0.62
LMX1A-201ENST00000294816 CARD10Q9BWT7 1032 aa11.2□□□□□ -0.62
LMX1A-201ENST00000294816 CNOT10Q9H9A5 744 aaKnown RBP11.2□□□□□ -0.62
LMX1A-201ENST00000294816 KIF9Q9HAQ2 790 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms