RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 MEI1Q5TIA1 1274 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 U2AF1L4Q8WU68 220 aaKnown RBP16.11■□□□□ 0.17
CCNF-201ENST00000293968 YY1AP1Q9H869 796 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 ATP8A1Q9Y2Q0 1164 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 CICQ96RK0 1608 aaPredicted RBP16.11■□□□□ 0.17
CCNF-201ENST00000293968 SART1O43290 800 aaKnown RBP16.11■□□□□ 0.17
CCNF-201ENST00000293968 LCA5LO95447 670 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 SLC9A1P19634 815 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 MAGOHP61326 146 aaKnown RBP16.11■□□□□ 0.17
CCNF-201ENST00000293968 DHX9Q08211 1270 aaKnown RBP16.11■□□□□ 0.17
CCNF-201ENST00000293968 KCNH2Q12809 1159 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 E2F5Q15329 346 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 ZNF572Q7Z3I7 529 aaPredicted RBP16.11■□□□□ 0.17
CCNF-201ENST00000293968 CCDC13Q8IYE1 715 aa16.11■□□□□ 0.17
CCNF-201ENST00000293968 MAGOHBQ96A72 148 aaKnown RBP16.11■□□□□ 0.17
CCNF-201ENST00000293968 CELF4Q9BZC1 486 aaKnown RBP16.11■□□□□ 0.17
CCNF-201ENST00000293968 ABCB4P21439 1286 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 CNPY4Q8N129 248 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 PIK3R5Q8WYR1 880 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 ANKS1AQ92625 1134 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.1■□□□□ 0.17
CCNF-201ENST00000293968 GMNCA6NCL1 334 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 KCNQ2O43526 872 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 FAM107AO95990 144 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 GSTO1P78417 241 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 ASTE1Q2TB18 679 aaPredicted RBP16.1■□□□□ 0.17
CCNF-201ENST00000293968 RUFY4Q6ZNE9 571 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 SPZ1Q9BXG8 430 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 KLC4Q9NSK0 619 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 PHF20L1A8MW92 1017 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 F8W031 263 aaPredicted RBP16.1■□□□□ 0.17
CCNF-201ENST00000293968 PGRMC1O00264 195 aaKnown RBP16.1■□□□□ 0.17
CCNF-201ENST00000293968 MEIS1O00470 390 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 KIF4AO95239 1232 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 LDHCP07864 332 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 SF3B3Q15393 1217 aaKnown RBP16.1■□□□□ 0.17
CCNF-201ENST00000293968 ECM1Q16610 540 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 ALKBH5Q6P6C2 394 aaKnown RBP16.1■□□□□ 0.17
CCNF-201ENST00000293968 EMILIN3Q9NT22 766 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 GEMIN8Q9NWZ8 242 aaKnown RBP16.1■□□□□ 0.17
CCNF-201ENST00000293968 NOC2LQ9Y3T9 749 aaKnown RBP16.1■□□□□ 0.17
CCNF-201ENST00000293968 SLIT2O94813 1529 aa16.1■□□□□ 0.17
CCNF-201ENST00000293968 MYH13Q9UKX3 1938 aa16.09■□□□□ 0.17
CCNF-201ENST00000293968 NOL4O94818 638 aa16.09■□□□□ 0.17
CCNF-201ENST00000293968 ITGA4P13612 1032 aa16.09■□□□□ 0.17
CCNF-201ENST00000293968 IFI16Q16666 785 aaKnown RBP16.09■□□□□ 0.17
CCNF-201ENST00000293968 VPS36Q86VN1 386 aa16.09■□□□□ 0.17
CCNF-201ENST00000293968 PRPF38AQ8NAV1 312 aaKnown RBP16.09■□□□□ 0.17
CCNF-201ENST00000293968 ZNF142P52746 1687 aaPredicted RBP16.09■□□□□ 0.17
CCNF-201ENST00000293968 POTEB3A0JP26 581 aa16.09■□□□□ 0.17
CCNF-201ENST00000293968 POTECB2RU33 542 aa16.09■□□□□ 0.17
CCNF-201ENST00000293968 ITGB3BPQ13352 177 aaPredicted RBP16.09■□□□□ 0.17
CCNF-201ENST00000293968 POTEBQ6S5H4 581 aa16.09■□□□□ 0.17
CCNF-201ENST00000293968 WDR66Q8TBY9 1149 aa16.09■□□□□ 0.17
CCNF-201ENST00000293968 INPP4AQ96PE3 977 aaPredicted RBP16.09■□□□□ 0.17
CCNF-201ENST00000293968 TMBIM4Q9HC24 238 aa16.09■□□□□ 0.17
CCNF-201ENST00000293968 TNFRSF8P28908 595 aa16.09■□□□□ 0.17
CCNF-201ENST00000293968 NF2P35240 595 aa16.09■□□□□ 0.17
CCNF-201ENST00000293968 TAX1BP1Q86VP1 789 aa16.09■□□□□ 0.17
CCNF-201ENST00000293968 CACNA2D3Q8IZS8 1091 aa16.09■□□□□ 0.17
CCNF-201ENST00000293968 MDM1Q8TC05 714 aa16.09■□□□□ 0.17
CCNF-201ENST00000293968 HDAC9Q9UKV0 1011 aa16.09■□□□□ 0.17
CCNF-201ENST00000293968 TTI1O43156 1089 aa16.08■□□□□ 0.17
CCNF-201ENST00000293968 COPB2P35606 906 aa16.08■□□□□ 0.17
CCNF-201ENST00000293968 STAT3P40763 770 aa16.08■□□□□ 0.17
CCNF-201ENST00000293968 CXorf56Q9H5V9 222 aa16.08■□□□□ 0.17
CCNF-201ENST00000293968 HAUS2Q9NVX0 235 aa16.08■□□□□ 0.17
CCNF-201ENST00000293968 PLA2G4BP0C869 781 aa16.08■□□□□ 0.16
CCNF-201ENST00000293968 FLT3P36888 993 aa16.08■□□□□ 0.16
CCNF-201ENST00000293968 ARMCX3Q9UH62 379 aaPredicted RBP16.08■□□□□ 0.16
CCNF-201ENST00000293968 UTP11Q9Y3A2 253 aaKnown RBP16.08■□□□□ 0.16
CCNF-201ENST00000293968 PCDHB13Q9Y5F0 798 aa16.08■□□□□ 0.16
CCNF-201ENST00000293968 KRT13P13646 458 aa16.08■□□□□ 0.16
CCNF-201ENST00000293968 PSMD2Q13200 908 aa16.08■□□□□ 0.16
CCNF-201ENST00000293968 PROM2Q8N271 834 aa16.08■□□□□ 0.16
CCNF-201ENST00000293968 ISCUQ9H1K1 167 aa16.08■□□□□ 0.16
CCNF-201ENST00000293968 SLC40A1Q9NP59 571 aa16.08■□□□□ 0.16
CCNF-201ENST00000293968 MYH3P11055 1940 aa16.08■□□□□ 0.16
CCNF-201ENST00000293968 EXOC3L4Q17RC7 722 aa16.08■□□□□ 0.16
CCNF-201ENST00000293968 CCDC26Q8TAB7 109 aa16.08■□□□□ 0.16
CCNF-201ENST00000293968 TRIM51Q9BSJ1 452 aa16.08■□□□□ 0.16
CCNF-201ENST00000293968 GJB7Q6PEY0 223 aa16.07■□□□□ 0.16
CCNF-201ENST00000293968 METTL13Q8N6R0 699 aa16.07■□□□□ 0.16
CCNF-201ENST00000293968 EDEM3Q9BZQ6 932 aa16.07■□□□□ 0.16
CCNF-201ENST00000293968 NEUROG2Q9H2A3 272 aa16.07■□□□□ 0.16
CCNF-201ENST00000293968 FRMD3A2A2Y4 597 aa16.07■□□□□ 0.16
CCNF-201ENST00000293968 TMEM110-MUSTN1A8MSY1 372 aa16.07■□□□□ 0.16
CCNF-201ENST00000293968 CLIC2O15247 247 aa16.07■□□□□ 0.16
CCNF-201ENST00000293968 FLOT1O75955 427 aa16.07■□□□□ 0.16
CCNF-201ENST00000293968 ZNF844Q08AG5 666 aa16.07■□□□□ 0.16
CCNF-201ENST00000293968 PABPC4Q13310 644 aaKnown RBP eCLIP16.07■□□□□ 0.162e-8■■□□□ 13.5
CCNF-201ENST00000293968 ZNF571Q7Z3V5 609 aaPredicted RBP16.07■□□□□ 0.16
CCNF-201ENST00000293968 MTMR9Q96QG7 549 aa16.07■□□□□ 0.16
CCNF-201ENST00000293968 GFPT2O94808 682 aa16.07■□□□□ 0.16
CCNF-201ENST00000293968 FSBPO95073 299 aa16.07■□□□□ 0.16
CCNF-201ENST00000293968 GNA14O95837 355 aa16.07■□□□□ 0.16
CCNF-201ENST00000293968 CCDC172P0C7W6 258 aa16.07■□□□□ 0.16
CCNF-201ENST00000293968 HSPA9P38646 679 aaKnown RBP16.07■□□□□ 0.16
CCNF-201ENST00000293968 QPCTQ16769 361 aa16.07■□□□□ 0.16
CCNF-201ENST00000293968 DDX20Q9UHI6 824 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms