RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 CLK2P49760 499 aaKnown RBP21.07■□□□□ 0.96
LSM12-201ENST00000293406 CD302Q8IX05 232 aa21.07■□□□□ 0.96
LSM12-201ENST00000293406 SLF2Q8IX21 1173 aa21.07■□□□□ 0.96
LSM12-201ENST00000293406 USP38Q8NB14 1042 aa21.07■□□□□ 0.96
LSM12-201ENST00000293406 SCFD1Q8WVM8 642 aa21.07■□□□□ 0.96
LSM12-201ENST00000293406 PIK3R5Q8WYR1 880 aa21.07■□□□□ 0.96
LSM12-201ENST00000293406 TAF4BQ92750 862 aa21.07■□□□□ 0.96
LSM12-201ENST00000293406 PLIN4Q96Q06 1357 aa21.07■□□□□ 0.96
LSM12-201ENST00000293406 ZEB2O60315 1214 aa21.06■□□□□ 0.96
LSM12-201ENST00000293406 PLA2G4BP0C869 781 aa21.06■□□□□ 0.96
LSM12-201ENST00000293406 GCFC2P16383 781 aaKnown RBP21.06■□□□□ 0.96
LSM12-201ENST00000293406 MRPL12P52815 198 aaKnown RBP21.06■□□□□ 0.96
LSM12-201ENST00000293406 GPSM2P81274 684 aa21.06■□□□□ 0.96
LSM12-201ENST00000293406 ADAM9Q13443 819 aa21.06■□□□□ 0.96
LSM12-201ENST00000293406 B4GALNT4Q76KP1 1039 aa21.06■□□□□ 0.96
LSM12-201ENST00000293406 ADGRF4Q8IZF3 695 aa21.06■□□□□ 0.96
LSM12-201ENST00000293406 RNPC3Q96LT9 517 aaKnown RBP21.06■□□□□ 0.96
LSM12-201ENST00000293406 GANQ9H2C0 597 aa21.06■□□□□ 0.96
LSM12-201ENST00000293406 KCTD10Q9H3F6 313 aa21.06■□□□□ 0.96
LSM12-201ENST00000293406 EMILIN3Q9NT22 766 aa21.06■□□□□ 0.96
LSM12-201ENST00000293406 NPHP3-ACAD11A0A0J9YXS1 232 aa21.06■□□□□ 0.96
LSM12-201ENST00000293406 RAD51CO43502 376 aa21.06■□□□□ 0.96
LSM12-201ENST00000293406 PPP1R11O60927 126 aaPredicted RBP21.06■□□□□ 0.96
LSM12-201ENST00000293406 UFL1O94874 794 aa21.06■□□□□ 0.96
LSM12-201ENST00000293406 CACNB1Q02641 598 aaPredicted RBP21.06■□□□□ 0.96
LSM12-201ENST00000293406 MFSD14BQ5SR56 506 aa21.06■□□□□ 0.96
LSM12-201ENST00000293406 GPBP1Q86WP2 473 aa21.06■□□□□ 0.96
LSM12-201ENST00000293406 ARHGEF1Q92888 912 aaKnown RBP21.06■□□□□ 0.96
LSM12-201ENST00000293406 FAM163AQ96GL9 167 aaPredicted RBP21.06■□□□□ 0.96
LSM12-201ENST00000293406 AHDC1Q5TGY3 1603 aaPredicted RBP21.05■□□□□ 0.96
LSM12-201ENST00000293406 AKR1B1P15121 316 aa21.05■□□□□ 0.96
LSM12-201ENST00000293406 KCNH2Q12809 1159 aa21.05■□□□□ 0.96
LSM12-201ENST00000293406 RPS6KA1Q15418 735 aa21.05■□□□□ 0.96
LSM12-201ENST00000293406 TRADDQ15628 312 aa21.05■□□□□ 0.96
LSM12-201ENST00000293406 PTF1AQ7RTS3 328 aa21.05■□□□□ 0.96
LSM12-201ENST00000293406 CLEC10AQ8IUN9 316 aa21.05■□□□□ 0.96
LSM12-201ENST00000293406 KLHL7Q8IXQ5 586 aa21.05■□□□□ 0.96
LSM12-201ENST00000293406 KCNK3O14649 394 aa21.05■□□□□ 0.96
LSM12-201ENST00000293406 CETN3O15182 167 aa21.05■□□□□ 0.96
LSM12-201ENST00000293406 IL1R1P14778 569 aa21.05■□□□□ 0.96
LSM12-201ENST00000293406 NR1D1P20393 614 aa21.05■□□□□ 0.96
LSM12-201ENST00000293406 INPP5BP32019 993 aa21.05■□□□□ 0.96
LSM12-201ENST00000293406 ZNF543Q08ER8 600 aa21.05■□□□□ 0.96
LSM12-201ENST00000293406 DPP8Q6V1X1 898 aaPredicted RBP21.05■□□□□ 0.96
LSM12-201ENST00000293406 NHSQ6T4R5 1651 aa21.05■□□□□ 0.96
LSM12-201ENST00000293406 POTEB3A0JP26 581 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 POTECB2RU33 542 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 CES2O00748 559 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 LSP1P33241 339 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 C10orf76Q5T2E6 689 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 EMC10Q5UCC4 262 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 POTEBQ6S5H4 581 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 AMIGO3Q86WK7 504 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 ZC3H3Q8IXZ2 948 aaKnown RBP21.04■□□□□ 0.96
LSM12-201ENST00000293406 UIMC1Q96RL1 719 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 TMEM59LQ9UK28 342 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 GAKO14976 1311 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 BTNL10A8MVZ5 291 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 TTLL1O95922 423 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 KRT18P05783 430 aaKnown RBP21.04■□□□□ 0.96
LSM12-201ENST00000293406 CYP11B2P19099 503 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 GUCY1A3Q02108 690 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 PTK2Q05397 1052 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 EDRF1Q3B7T1 1238 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 PPP4R3CPQ6ZMV5 832 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 ATP6V1G3Q96LB4 118 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 ZHX3Q9H4I2 956 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 TAF1DQ9H5J8 278 aaPredicted RBP21.04■□□□□ 0.96
LSM12-201ENST00000293406 PSTPIP2Q9H939 334 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 POLD4Q9HCU8 107 aa21.04■□□□□ 0.96
LSM12-201ENST00000293406 MYBP10242 640 aa21.03■□□□□ 0.96
LSM12-201ENST00000293406 PICALMQ13492 652 aa21.03■□□□□ 0.96
LSM12-201ENST00000293406 TTBK2Q6IQ55 1244 aa21.03■□□□□ 0.96
LSM12-201ENST00000293406 MAATS1Q7Z4T9 603 aa21.03■□□□□ 0.96
LSM12-201ENST00000293406 C1orf131Q8NDD1 294 aaKnown RBP21.03■□□□□ 0.96
LSM12-201ENST00000293406 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.03■□□□□ 0.96
LSM12-201ENST00000293406 EPN3Q9H201 632 aa21.03■□□□□ 0.96
LSM12-201ENST00000293406 IGKV6D-41A0A0C4DH26 115 aa21.03■□□□□ 0.96
LSM12-201ENST00000293406 HMGB1P1B2RPK0 211 aaPredicted RBP21.03■□□□□ 0.96
LSM12-201ENST00000293406 NR2F2P24468 414 aa21.03■□□□□ 0.96
LSM12-201ENST00000293406 HSPA9P38646 679 aaKnown RBP21.03■□□□□ 0.96
LSM12-201ENST00000293406 GTF2A1P52655 376 aaPredicted RBP21.03■□□□□ 0.96
LSM12-201ENST00000293406 HLTFQ14527 1009 aaKnown RBP eCLIP21.03■□□□□ 0.96
LSM12-201ENST00000293406 FAM98CQ17RN3 349 aaKnown RBP21.03■□□□□ 0.96
LSM12-201ENST00000293406 MMS22LQ6ZRQ5 1243 aa21.03■□□□□ 0.96
LSM12-201ENST00000293406 CNBD1Q8NA66 436 aa21.03■□□□□ 0.96
LSM12-201ENST00000293406 SPAG5Q96R06 1193 aa21.03■□□□□ 0.96
LSM12-201ENST00000293406 NAP1L4Q99733 375 aaKnown RBP21.03■□□□□ 0.96
LSM12-201ENST00000293406 HDAC9Q9UKV0 1011 aa21.03■□□□□ 0.96
LSM12-201ENST00000293406 PLAAQ9Y263 795 aa21.03■□□□□ 0.96
LSM12-201ENST00000293406 KIF4AO95239 1232 aa21.02■□□□□ 0.96
LSM12-201ENST00000293406 ACTN1P12814 892 aa21.02■□□□□ 0.96
LSM12-201ENST00000293406 USP11P51784 963 aa21.02■□□□□ 0.96
LSM12-201ENST00000293406 GABPAQ06546 454 aa21.02■□□□□ 0.96
LSM12-201ENST00000293406 IFI16Q16666 785 aaKnown RBP21.02■□□□□ 0.96
LSM12-201ENST00000293406 IRF2BP2Q7Z5L9 587 aa21.02■□□□□ 0.96
LSM12-201ENST00000293406 SPATS2Q86XZ4 545 aaKnown RBP21.02■□□□□ 0.96
LSM12-201ENST00000293406 ISCUQ9H1K1 167 aa21.02■□□□□ 0.96
LSM12-201ENST00000293406 GGA1Q9UJY5 639 aa21.02■□□□□ 0.96
LSM12-201ENST00000293406 ATXN2Q99700 1313 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms