RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 LGALS16A8MUM7 142 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 TMEM191BP0C7N4 346 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 CASP2P42575 452 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 PDE1BQ01064 536 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 RINT1Q6NUQ1 792 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 EMBQ6PCB8 327 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 CLEC17AQ6ZS10 378 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 PIP4K2CQ8TBX8 421 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 OSBPL9Q96SU4 736 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 PAGR1Q9BTK6 254 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 CPSF1Q10570 1443 aaKnown RBP16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 CHGBP05060 677 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 HOXA13P31271 388 aaPredicted RBP16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 ZNF211Q13398 564 aaPredicted RBP16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 FAM47EQ6ZV65 393 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 STK17AQ9UEE5 414 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 ATP10DQ9P241 1426 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 MAP3K7O43318 606 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 PDHA1P08559 390 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 PCP11498 1178 aaKnown RBP16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 VSNL1P62760 191 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 ABCB5Q2M3G0 1257 aa16.58■□□□□ 0.24
SHROOM4-201ENST00000289292 POTEMA6NI47 508 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 TSC22D3Q99576 134 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 TRIM66O15016 1216 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 LRRC23Q53EV4 343 aaPredicted RBP16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 ASPRV1Q53RT3 343 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 FAM167BQ9BTA0 163 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 XAB2Q9HCS7 855 aaKnown RBP16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 ROBO2Q9HCK4 1378 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 CFAP74Q9C0B2 1584 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 CAPN9O14815 690 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 PPIP5K2O43314 1243 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 TTLL1O95922 423 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 ALKBH5Q6P6C2 394 aaKnown RBP16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 HIPK4Q8NE63 616 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 CUL1Q13616 776 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 MRPL46Q9H2W6 279 aaKnown RBP16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 RNF14Q9UBS8 474 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 HP1BP3Q5SSJ5 553 aaPredicted RBP16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 E4F1Q66K89 784 aaPredicted RBP16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 NLRP10Q86W26 655 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 SYNE4Q8N205 404 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 HVCN1Q96D96 273 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 LRGUKQ96M69 825 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 RIOK1Q9BRS2 568 aaKnown RBP16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 LY9Q9HBG7 655 aa16.57■□□□□ 0.24
SHROOM4-201ENST00000289292 RNF8O76064 485 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 CYP2E1P05181 493 aaPredicted RBP16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 IGKV5-2P06315 115 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 GUCY1A3Q02108 690 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 TRIM10Q9UDY6 481 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 LRRC14Q15048 493 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 JADE1Q6IE81 842 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 FBXO41Q8TF61 875 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 NSMCE1Q8WV22 266 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 ACCSQ96QU6 501 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 MT-ND3P03897 115 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 NLRP14Q86W24 1093 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 GABPB2Q8TAK5 448 aaPredicted RBP16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 GINM1Q9NU53 330 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 GGT7Q9UJ14 662 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 UBN2Q6ZU65 1347 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 CPP00450 1065 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 CD58P19256 250 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 NCF2P19878 526 aaPredicted RBP16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 STRBPQ96SI9 672 aaKnown RBP16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 SUDS3Q9H7L9 328 aaPredicted RBP16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 KMT5AQ9NQR1 393 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 ACTN1P12814 892 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 LIFRP42702 1097 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 SLMAPQ14BN4 828 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 C6orf118Q5T5N4 469 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 DARS2Q6PI48 645 aaKnown RBP16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 ZBTB33Q86T24 672 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 NACA2Q9H009 215 aa16.56■□□□□ 0.24
SHROOM4-201ENST00000289292 TTC26A0AVF1 554 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 TADA3O75528 432 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 GARSP41250 739 aaKnown RBP16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 MCUQ8NE86 351 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 MS4A14Q96JA4 679 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 AMNQ9BXJ7 453 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 HEMGNQ9BXL5 484 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 A0A0G2JND7 137 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 CLRN2A0PK11 232 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 GOLGA8MH3BSY2 632 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 GAP43P17677 238 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 ATP2B4P23634 1241 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 ASPHQ12797 758 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 SCARA5Q6ZMJ2 495 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 ZWILCHQ9H900 591 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 GUCY1A2P33402 732 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 TMC4Q7Z404 712 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 ZBTB8OSQ8IWT0 167 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 HOOK2Q96ED9 719 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 VCX3AQ9NNX9 186 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 TMEM260Q9NX78 707 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 A6NJR5 290 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 EVI5O60447 810 aa16.55■□□□□ 0.24
SHROOM4-201ENST00000289292 USP14P54578 494 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms