RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 RGL1Q9NZL6 768 aa11.31□□□□□ -0.6
C9orf43-201ENST00000288462 ZNF214Q9UL59 606 aaPredicted RBP11.31□□□□□ -0.6
C9orf43-201ENST00000288462 SLITRK3O94933 977 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 FGFR1OPO95684 399 aaKnown RBP11.3□□□□□ -0.6
C9orf43-201ENST00000288462 KRT18P05783 430 aaKnown RBP11.3□□□□□ -0.6
C9orf43-201ENST00000288462 TNNT1P13805 278 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 DNM2P50570 870 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 FXR1P51114 621 aaKnown RBP eCLIP11.3□□□□□ -0.6
C9orf43-201ENST00000288462 UBXN1Q04323 297 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 VGLL4Q14135 290 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 LRRC41Q15345 812 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 EPHA7Q15375 998 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 TKFCQ3LXA3 575 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 MIIPQ5JXC2 388 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 CATSPERGQ6ZRH7 1159 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.3□□□□□ -0.6
C9orf43-201ENST00000288462 DYDC2Q96IM9 177 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 TAAR1Q96RJ0 339 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 TSG101Q99816 390 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 NAA15Q9BXJ9 866 aaKnown RBP11.3□□□□□ -0.6
C9orf43-201ENST00000288462 JADE2Q9NQC1 790 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 KCNH7Q9NS40 1196 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 TRMT1Q9NXH9 659 aaKnown RBP11.3□□□□□ -0.6
C9orf43-201ENST00000288462 TMOD4Q9NZQ9 345 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 CHMP2AO43633 222 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 TPM2P07951 284 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 TPM1P09493 284 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 CASP14P31944 242 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 CACNB1Q02641 598 aaPredicted RBP11.3□□□□□ -0.6
C9orf43-201ENST00000288462 CTTNQ14247 550 aaKnown RBP11.3□□□□□ -0.6
C9orf43-201ENST00000288462 COG2Q14746 738 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 PGM5Q15124 567 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 RNF207Q6ZRF8 634 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 EPM2AIP1Q7L775 607 aaPredicted RBP11.3□□□□□ -0.6
C9orf43-201ENST00000288462 ZC3H3Q8IXZ2 948 aaKnown RBP11.3□□□□□ -0.6
C9orf43-201ENST00000288462 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
C9orf43-201ENST00000288462 SCFD1Q8WVM8 642 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 ZFP91Q96JP5 570 aaPredicted RBP11.3□□□□□ -0.6
C9orf43-201ENST00000288462 RUSC1Q9BVN2 902 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 MAF1Q9H063 256 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 BHMT2Q9H2M3 363 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 AGO4Q9HCK5 861 aaKnown RBP11.3□□□□□ -0.6
C9orf43-201ENST00000288462 PXMP2Q9NR77 195 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 RIPK3Q9Y572 518 aa11.3□□□□□ -0.6
C9orf43-201ENST00000288462 B4DLN1 442 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 ADM5C9JUS6 153 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 KIF2AO00139 706 aaPredicted RBP11.29□□□□□ -0.6
C9orf43-201ENST00000288462 DHX15O43143 795 aaKnown RBP11.29□□□□□ -0.6
C9orf43-201ENST00000288462 KIF20AO95235 890 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 PRKCSHP14314 528 aaPredicted RBP11.29□□□□□ -0.6
C9orf43-201ENST00000288462 PTPN14Q15678 1187 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 HERC4Q5GLZ8 1057 aaPredicted RBP11.29□□□□□ -0.6
C9orf43-201ENST00000288462 L3MBTL3Q96JM7 780 aaPredicted RBP11.29□□□□□ -0.6
C9orf43-201ENST00000288462 PDCD2LQ9BRP1 358 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 KCTD10Q9H3F6 313 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 WDR81Q562E7 1941 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 KIAA1217Q5T5P2 1943 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 SPDYE16A6NNV3 312 aaPredicted RBP11.29□□□□□ -0.6
C9orf43-201ENST00000288462 EIF2AK2P19525 551 aaKnown RBP11.29□□□□□ -0.6
C9orf43-201ENST00000288462 MTIF2P46199 727 aaKnown RBP11.29□□□□□ -0.6
C9orf43-201ENST00000288462 MAP3K9P80192 1104 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 RAD51AP2Q09MP3 1159 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 ITGB3BPQ13352 177 aaPredicted RBP11.29□□□□□ -0.6
C9orf43-201ENST00000288462 TMEM132BQ14DG7 1078 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 BMT2Q1RMZ1 405 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 C9orf131Q5VYM1 1079 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 SNRNP48Q6IEG0 339 aaKnown RBP11.29□□□□□ -0.6
C9orf43-201ENST00000288462 RINT1Q6NUQ1 792 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 XRRA1Q6P2D8 792 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 SFR1Q86XK3 245 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 CREBRFQ8IUR6 639 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 SULF1Q8IWU6 871 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 MYRIPQ8NFW9 859 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 DCPSQ96C86 337 aaKnown RBP11.29□□□□□ -0.6
C9orf43-201ENST00000288462 EEF2KMTQ96G04 330 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 ERGIC2Q96RQ1 377 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 RMDN3Q96TC7 470 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 TEX13BQ9BXU2 312 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 TTYH3Q9C0H2 523 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 ABHD10Q9NUJ1 306 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 TBC1D7Q9P0N9 293 aa11.29□□□□□ -0.6
C9orf43-201ENST00000288462 WRAP73Q9P2S5 460 aaPredicted RBP11.29□□□□□ -0.6
C9orf43-201ENST00000288462 SCN4AP35499 1836 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 MYH11P35749 1972 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 NKRFO15226 690 aaKnown RBP eCLIP11.28□□□□□ -0.6
C9orf43-201ENST00000288462 GAP43P17677 238 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 MTMR1Q13613 665 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 MAN2A1Q16706 1144 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 NSMFQ6X4W1 530 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 PPP4R3CPQ6ZMV5 832 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 C1orf186Q6ZWK4 172 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 TPH2Q8IWU9 490 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 REXO1L1PQ8IX06 675 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 CEP63Q96MT8 703 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 NACC1Q96RE7 527 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 LXNQ9BS40 222 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 NOC4LQ9BVI4 516 aaKnown RBP11.28□□□□□ -0.6
C9orf43-201ENST00000288462 OLFML3Q9NRN5 406 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 KCND2Q9NZV8 630 aa11.28□□□□□ -0.6
C9orf43-201ENST00000288462 PPP2R2CQ9Y2T4 447 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms