RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CACNA2D3Q8IZS8 1091 aa14.15□□□□□ -0.15
COL8A1-202ENST00000273342 REXO1Q8N1G1 1221 aaKnown RBP14.15□□□□□ -0.15
COL8A1-202ENST00000273342 GUF1Q8N442 669 aaKnown RBP14.15□□□□□ -0.15
COL8A1-202ENST00000273342 MARCH10Q8NA82 808 aaPredicted RBP14.15□□□□□ -0.15
COL8A1-202ENST00000273342 GPR101Q96P66 508 aaPredicted RBP14.15□□□□□ -0.15
COL8A1-202ENST00000273342 ATP8A2Q9NTI2 1148 aa14.15□□□□□ -0.15
COL8A1-202ENST00000273342 CEP72Q9P209 647 aa14.15□□□□□ -0.15
COL8A1-202ENST00000273342 CEP83Q9Y592 693 aa14.15□□□□□ -0.15
COL8A1-202ENST00000273342 UBR2Q8IWV8 1755 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 E9PMD0 336 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 FGFR1OPO95684 399 aaKnown RBP14.14□□□□□ -0.15
COL8A1-202ENST00000273342 MYCNP04198 464 aaPredicted RBP14.14□□□□□ -0.15
COL8A1-202ENST00000273342 ELF1P32519 619 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 UBE2SQ16763 222 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 NBPF9Q3BBW0 867 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 TCERG1LQ5VWI1 586 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 C6orf89Q6UWU4 347 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 KRT25Q7Z3Z0 450 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 CLEC10AQ8IUN9 316 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 METTL13Q8N6R0 699 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 RUBCNQ92622 972 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 CCDC113Q9H0I3 377 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 LUC7LQ9NQ29 371 aaKnown RBP14.14□□□□□ -0.15
COL8A1-202ENST00000273342 SEC63Q9UGP8 760 aaKnown RBP14.14□□□□□ -0.15
COL8A1-202ENST00000273342 PNMA2Q9UL42 364 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 LAD1O00515 517 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 TRAPPC3O43617 180 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 RAD21O60216 631 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 HIBADHP31937 336 aaKnown RBP14.14□□□□□ -0.15
COL8A1-202ENST00000273342 PPP1R7Q15435 360 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 GRIK5Q16478 980 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 ANKRD20A8PQ5CZ79 823 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 SPTY2D1Q68D10 685 aaPredicted RBP14.14□□□□□ -0.15
COL8A1-202ENST00000273342 HIBCHQ6NVY1 386 aaPredicted RBP14.14□□□□□ -0.15
COL8A1-202ENST00000273342 INTS5Q6P9B9 1019 aaKnown RBP14.14□□□□□ -0.15
COL8A1-202ENST00000273342 PNMA8AQ86V59 439 aaPredicted RBP14.14□□□□□ -0.15
COL8A1-202ENST00000273342 ARFGAP2Q8N6H7 521 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 TCP11Q8WWU5 503 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 ISCUQ9H1K1 167 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 SLC12A6Q9UHW9 1150 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 NOC2LQ9Y3T9 749 aaKnown RBP14.14□□□□□ -0.15
COL8A1-202ENST00000273342 NR2E1Q9Y466 385 aa14.14□□□□□ -0.15
COL8A1-202ENST00000273342 KIF4AO95239 1232 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 CDC25CP30307 473 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 SCTRP47872 440 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 IFNAR2P48551 515 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 PPP2R2AP63151 447 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 FKBP3Q00688 224 aaKnown RBP14.13□□□□□ -0.15
COL8A1-202ENST00000273342 DDR1Q08345 913 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 COASYQ13057 564 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 HERC4Q5GLZ8 1057 aaPredicted RBP14.13□□□□□ -0.15
COL8A1-202ENST00000273342 DCAF17Q5H9S7 520 aaPredicted RBP14.13□□□□□ -0.15
COL8A1-202ENST00000273342 KRT79Q5XKE5 535 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 GJB7Q6PEY0 223 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 ZNF571Q7Z3V5 609 aaPredicted RBP14.13□□□□□ -0.15
COL8A1-202ENST00000273342 DGKHQ86XP1 1220 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 TEX2Q8IWB9 1127 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 PLCB1Q9NQ66 1216 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 CCDC87Q9NVE4 849 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 PANK4Q9NVE7 773 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 H0YGN5 161 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 CTNND1O60716 968 aaKnown RBP14.13□□□□□ -0.15
COL8A1-202ENST00000273342 CLTAP09496 248 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 PCP11498 1178 aaKnown RBP14.13□□□□□ -0.15
COL8A1-202ENST00000273342 GNAQP50148 359 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 LRRC63Q05C16 580 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 UBE4AQ14139 1066 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 LLGL1Q15334 1064 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 C12orf60Q5U649 245 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 PPP4R3AQ6IN85 833 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 CD302Q8IX05 232 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 MREGQ8N565 214 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 ZMYND12Q9H0C1 365 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 NFS1Q9Y697 457 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 BCORQ6W2J9 1755 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 MYH3P11055 1940 aa14.13□□□□□ -0.15
COL8A1-202ENST00000273342 CAMTA2O94983 1202 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 KRT18P05783 430 aaKnown RBP14.12□□□□□ -0.15
COL8A1-202ENST00000273342 SLCO1A2P46721 670 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 ADAM9Q13443 819 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 FAM133BQ5BKY9 247 aaKnown RBP14.12□□□□□ -0.15
COL8A1-202ENST00000273342 FAM26FQ5R3K3 315 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 PEX26Q7Z412 305 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 YTHDF3Q7Z739 585 aaKnown RBP14.12□□□□□ -0.15
COL8A1-202ENST00000273342 DAAM2Q86T65 1068 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 RAD54LQ92698 747 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 HVCN1Q96D96 273 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 SLC24A3Q9HC58 644 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 RNF14Q9UBS8 474 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 PCDHGC5Q9Y5F6 944 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 ADAMTSL3P82987 1691 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 ABCB4P21439 1286 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 PSEN1P49768 467 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 TMEM266Q2M3C6 531 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 ACCSLQ4AC99 568 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 GKAP1Q5VSY0 366 aaPredicted RBP14.12□□□□□ -0.15
COL8A1-202ENST00000273342 LRRC45Q96CN5 670 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 MAGEF1Q9HAY2 307 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 TAF1P21675 1872 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 EIF4E1BA6NMX2 242 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms