RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 DEFA3P59666 94 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 SPATA1Q5VX52 437 aa16.93■□□□□ 0.3
UBR3-201ENST00000272793 E5RI56 91 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 SGO2Q562F6 1265 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 SYNPO2Q9UMS6 1093 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 RNF113AO15541 343 aaKnown RBP16.92■□□□□ 0.3
UBR3-201ENST00000272793 ZBTB33Q86T24 672 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 HEATR4Q86WZ0 1026 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 ULK4Q96C45 1275 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 MRPL40Q9NQ50 206 aaKnown RBP16.92■□□□□ 0.3
UBR3-201ENST00000272793 RGS5O15539 181 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 CYTH1Q15438 398 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 LRRC8EQ6NSJ5 796 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 TAF8Q7Z7C8 310 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 TBC1D22AQ8WUA7 517 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 EEF2KMTQ96G04 330 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 DNAJC17Q9NVM6 304 aaKnown RBP16.92■□□□□ 0.3
UBR3-201ENST00000272793 EXOC1LA0A1B0GW35 172 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 CFBP00751 764 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 WDR75Q8IWA0 830 aaKnown RBP16.92■□□□□ 0.3
UBR3-201ENST00000272793 UXS1Q8NBZ7 420 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 PPP1R36Q96LQ0 422 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 NOP53Q9NZM5 478 aaKnown RBP16.92■□□□□ 0.3
UBR3-201ENST00000272793 A0A0G2JND7 137 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 BBS2Q9BXC9 721 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 TBC1D4O60343 1298 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 SHROOM1Q2M3G4 852 aaPredicted RBP16.92■□□□□ 0.3
UBR3-201ENST00000272793 ANO5Q75V66 913 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 NYXQ9GZU5 481 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 SLITRK6Q9H5Y7 841 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 AURKCQ9UQB9 309 aa16.92■□□□□ 0.3
UBR3-201ENST00000272793 V9GY48 417 aaPredicted RBP16.92■□□□□ 0.3
UBR3-201ENST00000272793 RUNX1T1Q06455 604 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 MLKLQ8NB16 471 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 CNBD2Q96M20 576 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 ENC1O14682 589 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 MMEP08473 750 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 AP1S2P56377 157 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 COPS6Q7L5N1 327 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 CYGBQ8WWM9 190 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 C19orf60Q96EN9 201 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 UBE4BO95155 1302 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 MDM2Q00987 491 aaPredicted RBP16.91■□□□□ 0.3
UBR3-201ENST00000272793 TFCP2Q12800 502 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 MYL10Q9BUA6 226 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 CALN1Q9BXU9 219 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 TESPA1A2RU30 521 aaPredicted RBP16.91■□□□□ 0.3
UBR3-201ENST00000272793 LRRC53A6NM62 1247 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 E4F1Q66K89 784 aaPredicted RBP16.91■□□□□ 0.3
UBR3-201ENST00000272793 NDUFAF2Q8N183 169 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 INTS4Q96HW7 963 aaKnown RBP16.91■□□□□ 0.3
UBR3-201ENST00000272793 NSFL1CQ9UNZ2 370 aaKnown RBP16.91■□□□□ 0.3
UBR3-201ENST00000272793 NCOA2Q15596 1464 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 GAS7O60861 476 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 HIBCHQ6NVY1 386 aaPredicted RBP16.91■□□□□ 0.3
UBR3-201ENST00000272793 RWDD4Q6NW29 188 aaKnown RBP16.91■□□□□ 0.3
UBR3-201ENST00000272793 STON1Q9Y6Q2 735 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 ZBED4O75132 1171 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 IGBP1P78318 339 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 RNF135Q8IUD6 432 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 ZBTB8OSQ8IWT0 167 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 RNASE11Q8TAA1 199 aaKnown RBP16.91■□□□□ 0.3
UBR3-201ENST00000272793 AFF4Q9UHB7 1163 aaKnown RBP16.91■□□□□ 0.3
UBR3-201ENST00000272793 KIAA1107Q9UPP5 1409 aa16.91■□□□□ 0.3
UBR3-201ENST00000272793 ARPP19P56211 112 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 MLXIPQ9HAP2 919 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 ZNF304Q9HCX3 659 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 TBC1D23Q9NUY8 699 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 RPS6KB1P23443 525 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 TRIM25Q14258 630 aaKnown RBP16.9■□□□□ 0.3
UBR3-201ENST00000272793 THEMISQ8N1K5 641 aaPredicted RBP16.9■□□□□ 0.3
UBR3-201ENST00000272793 POLIQ9UNA4 740 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 CFAP69A5D8W1 941 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 NFKBIAP25963 317 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 KRT76Q01546 638 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 STX3Q13277 289 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 SEPT2Q15019 361 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 Q3C1V9 767 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 PASD1Q8IV76 773 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 MYLK2Q9H1R3 596 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 DHX36Q9H2U1 1008 aaKnown RBP16.9■□□□□ 0.3
UBR3-201ENST00000272793 APOBEC2Q9Y235 224 aaKnown RBP16.9■□□□□ 0.3
UBR3-201ENST00000272793 MROH2BQ7Z745 1585 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 MEIS1O00470 390 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 COBLO75128 1261 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 DLGAP3O95886 979 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 POLGP54098 1239 aaPredicted RBP16.9■□□□□ 0.3
UBR3-201ENST00000272793 PSMD2Q13200 908 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 TAF1BQ53T94 588 aaPredicted RBP16.9■□□□□ 0.3
UBR3-201ENST00000272793 TTC38Q5R3I4 469 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 NUGGCQ68CJ6 796 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 EXOC8Q8IYI6 725 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 SYT2Q8N9I0 419 aaPredicted RBP16.9■□□□□ 0.3
UBR3-201ENST00000272793 SH3KBP1Q96B97 665 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 ACSBG1Q96GR2 724 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 FAM161BQ96MY7 647 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 CFTRP13569 1480 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 K7ENM7 598 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 SLC39A6Q13433 755 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 NANOGNBQ7Z5D8 188 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms