RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 MTMR4Q9NYA4 1195 aa18.47■□□□□ 0.55
SQLE-201ENST00000265896 PCDHB13Q9Y5F0 798 aa18.47■□□□□ 0.55
SQLE-201ENST00000265896 MED24O75448 989 aa18.46■□□□□ 0.55
SQLE-201ENST00000265896 TMOD1P28289 359 aa18.46■□□□□ 0.55
SQLE-201ENST00000265896 TBC1D10BQ4KMP7 808 aaPredicted RBP18.46■□□□□ 0.55
SQLE-201ENST00000265896 PRR16Q569H4 304 aa18.46■□□□□ 0.55
SQLE-201ENST00000265896 FIGNQ5HY92 759 aa18.46■□□□□ 0.55
SQLE-201ENST00000265896 CYP2W1Q8TAV3 490 aa18.46■□□□□ 0.55
SQLE-201ENST00000265896 PSTPIP2Q9H939 334 aa18.46■□□□□ 0.55
SQLE-201ENST00000265896 EMILIN3Q9NT22 766 aa18.46■□□□□ 0.55
SQLE-201ENST00000265896 ZBTB39O15060 712 aa18.46■□□□□ 0.55
SQLE-201ENST00000265896 ERLIN2O94905 339 aa18.46■□□□□ 0.55
SQLE-201ENST00000265896 ABCB4P21439 1286 aa18.46■□□□□ 0.55
SQLE-201ENST00000265896 POLD1P28340 1107 aa18.46■□□□□ 0.55
SQLE-201ENST00000265896 IKQ13123 557 aaPredicted RBP18.46■□□□□ 0.55
SQLE-201ENST00000265896 PLS1Q14651 629 aa18.46■□□□□ 0.55
SQLE-201ENST00000265896 POLLQ9UGP5 575 aa18.46■□□□□ 0.55
SQLE-201ENST00000265896 PHLPP1O60346 1717 aa18.46■□□□□ 0.55
SQLE-201ENST00000265896 SMIM23A6NLE4 172 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 HNRNPH3P31942 346 aaKnown RBP18.45■□□□□ 0.54
SQLE-201ENST00000265896 GTF2A1P52655 376 aaPredicted RBP18.45■□□□□ 0.54
SQLE-201ENST00000265896 GSTO1P78417 241 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 FAM196AQ6ZSG2 479 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 ZNF571Q7Z3V5 609 aaPredicted RBP18.45■□□□□ 0.54
SQLE-201ENST00000265896 UHMK1Q8TAS1 419 aaKnown RBP18.45■□□□□ 0.54
SQLE-201ENST00000265896 NEUROG2Q9H2A3 272 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 SEPT11Q9NVA2 429 aaKnown RBP18.45■□□□□ 0.54
SQLE-201ENST00000265896 PLAAQ9Y263 795 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 ATP6V0A2Q9Y487 856 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 CASZ1Q86V15 1759 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 ROBO1Q9Y6N7 1651 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 LDHCP07864 332 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 MYBP10242 640 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 HOXA13P31271 388 aaPredicted RBP18.45■□□□□ 0.54
SQLE-201ENST00000265896 UBXN2AP68543 259 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 GRAPQ13588 217 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 IFT20Q8IY31 132 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 MSL3Q8N5Y2 521 aaKnown RBP18.45■□□□□ 0.54
SQLE-201ENST00000265896 GRAPLQ8TC17 118 aaPredicted RBP18.45■□□□□ 0.54
SQLE-201ENST00000265896 PPM1EQ8WY54 764 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 AMACRQ9UHK6 382 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 CAPN7Q9Y6W3 813 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 DCDC2CA8MYV0 355 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 CHMP2AO43633 222 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 ERVK-9P63128 1117 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 CDK17Q00537 523 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 LRRC63Q05C16 580 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 NFIAQ12857 509 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 ASIC2Q16515 512 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 RDH13Q8NBN7 331 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 PIK3R5Q8WYR1 880 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 RAB34Q9BZG1 259 aa18.45■□□□□ 0.54
SQLE-201ENST00000265896 ZNF219Q9P2Y4 722 aaPredicted RBP18.45■□□□□ 0.54
SQLE-201ENST00000265896 H0YHG0 523 aa18.44■□□□□ 0.54
SQLE-201ENST00000265896 OPA1O60313 960 aa18.44■□□□□ 0.54
SQLE-201ENST00000265896 SLC20A2Q08357 652 aa18.44■□□□□ 0.54
SQLE-201ENST00000265896 BMP2KQ9NSY1 1161 aaPredicted RBP18.44■□□□□ 0.54
SQLE-201ENST00000265896 IRS2Q9Y4H2 1338 aa18.44■□□□□ 0.54
SQLE-201ENST00000265896 PVALEFA0A1B0GWK0 134 aa18.44■□□□□ 0.54
SQLE-201ENST00000265896 SERPING1P05155 500 aa18.44■□□□□ 0.54
SQLE-201ENST00000265896 ZNF662Q6ZS27 426 aa18.44■□□□□ 0.54
SQLE-201ENST00000265896 UBLCP1Q8WVY7 318 aaPredicted RBP18.44■□□□□ 0.54
SQLE-201ENST00000265896 P2RX7Q99572 595 aaKnown RBP18.44■□□□□ 0.54
SQLE-201ENST00000265896 LZTS2Q9BRK4 669 aa18.44■□□□□ 0.54
SQLE-201ENST00000265896 RIOX1Q9H6W3 641 aa18.44■□□□□ 0.54
SQLE-201ENST00000265896 MAGEF1Q9HAY2 307 aa18.44■□□□□ 0.54
SQLE-201ENST00000265896 STK17AQ9UEE5 414 aa18.44■□□□□ 0.54
SQLE-201ENST00000265896 DAGLAQ9Y4D2 1042 aa18.44■□□□□ 0.54
SQLE-201ENST00000265896 E7EVH7 732 aa18.43■□□□□ 0.54
SQLE-201ENST00000265896 FXR2P51116 673 aaKnown RBP eCLIP18.43■□□□□ 0.546e-7■■□□□ 12.8
SQLE-201ENST00000265896 HDLBPQ00341 1268 aaKnown RBP18.43■□□□□ 0.54
SQLE-201ENST00000265896 ODF2Q5BJF6 829 aa18.43■□□□□ 0.54
SQLE-201ENST00000265896 PIGOQ8TEQ8 1089 aa18.43■□□□□ 0.54
SQLE-201ENST00000265896 ZNF287Q9HBT7 754 aa18.43■□□□□ 0.54
SQLE-201ENST00000265896 KCNQ5Q9NR82 932 aa18.43■□□□□ 0.54
SQLE-201ENST00000265896 CEP72Q9P209 647 aa18.43■□□□□ 0.54
SQLE-201ENST00000265896 FGFR1OPO95684 399 aaKnown RBP18.43■□□□□ 0.54
SQLE-201ENST00000265896 SLC18A3Q16572 532 aa18.43■□□□□ 0.54
SQLE-201ENST00000265896 ARSHQ5FYA8 562 aa18.43■□□□□ 0.54
SQLE-201ENST00000265896 MAEAQ7L5Y9 396 aa18.43■□□□□ 0.54
SQLE-201ENST00000265896 SFR1Q86XK3 245 aa18.43■□□□□ 0.54
SQLE-201ENST00000265896 TAF4BQ92750 862 aa18.43■□□□□ 0.54
SQLE-201ENST00000265896 RGL1Q9NZL6 768 aa18.43■□□□□ 0.54
SQLE-201ENST00000265896 HDAC9Q9UKV0 1011 aa18.43■□□□□ 0.54
SQLE-201ENST00000265896 NR2E1Q9Y466 385 aa18.43■□□□□ 0.54
SQLE-201ENST00000265896 GOLGA8KD6RF30 607 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 SHOX2O60902 331 aaPredicted RBP18.42■□□□□ 0.54
SQLE-201ENST00000265896 RPS6KA4O75676 772 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 INPP5BP32019 993 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 PPP4CP60510 307 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 RPS6KA1Q15418 735 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 NAB2Q15742 525 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 EMBQ6PCB8 327 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 SPICE1Q8N0Z3 855 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 RBM46Q8TBY0 533 aaKnown RBP18.42■□□□□ 0.54
SQLE-201ENST00000265896 ELMO3Q96BJ8 720 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 OSGEPQ9NPF4 335 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 GPR75-ASB3A0A0A6YYF3 556 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 GFPT2O94808 682 aa18.42■□□□□ 0.54
SQLE-201ENST00000265896 CYP11B2P19099 503 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms