RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 ICAM3P32942 547 aa25.58■■□□□ 1.68
SMARCB1-201ENST00000263121 SLC12A3P55017 1021 aa25.58■■□□□ 1.68
SMARCB1-201ENST00000263121 PSMC6P62333 389 aa25.58■■□□□ 1.68
SMARCB1-201ENST00000263121 MIER3Q7Z3K6 550 aa25.58■■□□□ 1.68
SMARCB1-201ENST00000263121 PPP1R3GB7ZBB8 358 aa25.57■■□□□ 1.68
SMARCB1-201ENST00000263121 PGK2P07205 417 aa25.57■■□□□ 1.68
SMARCB1-201ENST00000263121 ERCC5P28715 1186 aaPredicted RBP25.57■■□□□ 1.68
SMARCB1-201ENST00000263121 CTTNQ14247 550 aaKnown RBP25.57■■□□□ 1.68
SMARCB1-201ENST00000263121 WDR78Q5VTH9 848 aa25.57■■□□□ 1.68
SMARCB1-201ENST00000263121 SMYD4Q8IYR2 804 aaPredicted RBP25.57■■□□□ 1.68
SMARCB1-201ENST00000263121 DDX12PQ92771 950 aa25.57■■□□□ 1.68
SMARCB1-201ENST00000263121 PDLIM2Q96JY6 352 aa25.57■■□□□ 1.68
SMARCB1-201ENST00000263121 PPP1R9BQ96SB3 815 aa25.57■■□□□ 1.68
SMARCB1-201ENST00000263121 NFASCO94856 1347 aa25.56■■□□□ 1.68
SMARCB1-201ENST00000263121 PVALEFA0A1B0GWK0 134 aa25.56■■□□□ 1.68
SMARCB1-201ENST00000263121 IGF2BP3O00425 579 aaKnown RBP eCLIP25.56■■□□□ 1.68
SMARCB1-201ENST00000263121 KRT76Q01546 638 aa25.56■■□□□ 1.68
SMARCB1-201ENST00000263121 MYL5Q02045 173 aa25.56■■□□□ 1.68
SMARCB1-201ENST00000263121 CCDC173Q0VFZ6 552 aa25.56■■□□□ 1.68
SMARCB1-201ENST00000263121 UNC13DQ70J99 1090 aa25.56■■□□□ 1.68
SMARCB1-201ENST00000263121 SYT2Q8N9I0 419 aaPredicted RBP25.56■■□□□ 1.68
SMARCB1-201ENST00000263121 CCDC47Q96A33 483 aaKnown RBP25.56■■□□□ 1.68
SMARCB1-201ENST00000263121 ADGRA2Q96PE1 1338 aa25.56■■□□□ 1.68
SMARCB1-201ENST00000263121 FAM155AB1AL88 458 aaPredicted RBP25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 B4DLN1 442 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 EYA4O95677 639 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 CYP11B2P19099 503 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 PDE4DQ08499 809 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 FAM110CQ1W6H9 321 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 TPH2Q8IWU9 490 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 DNAJC19Q96DA6 116 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 SENP7Q9BQF6 1050 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 EXOC1Q9NV70 894 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 PLXNB2O15031 1838 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 ZNFX1Q9P2E3 1918 aaKnown RBP25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 CCNE2O96020 404 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 SSBP05455 408 aaKnown RBP eCLIP25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 DYMQ7RTS9 669 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 GPBP1Q86WP2 473 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 GIMAP8Q8ND71 665 aaPredicted RBP25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 MED15Q96RN5 788 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 LXNQ9BS40 222 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 WRAP73Q9P2S5 460 aaPredicted RBP25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 GDAQ9Y2T3 454 aa25.55■■□□□ 1.68
SMARCB1-201ENST00000263121 LOC102724159A0A0B4J2E5 919 aa25.54■■□□□ 1.68
SMARCB1-201ENST00000263121 SFNP31947 248 aa25.54■■□□□ 1.68
SMARCB1-201ENST00000263121 JAK3P52333 1124 aa25.54■■□□□ 1.68
SMARCB1-201ENST00000263121 PWP2Q15269 919 aaKnown RBP25.54■■□□□ 1.68
SMARCB1-201ENST00000263121 ZNF746Q6NUN9 644 aaPredicted RBP25.54■■□□□ 1.68
SMARCB1-201ENST00000263121 ABRAQ8N0Z2 381 aa25.54■■□□□ 1.68
SMARCB1-201ENST00000263121 RDM1Q8NG50 284 aa25.54■■□□□ 1.68
SMARCB1-201ENST00000263121 ENOX1Q8TC92 643 aaKnown RBP25.54■■□□□ 1.68
SMARCB1-201ENST00000263121 MPHOSPH6Q99547 160 aaKnown RBP25.54■■□□□ 1.68
SMARCB1-201ENST00000263121 GTPBP4Q9BZE4 634 aaKnown RBP25.54■■□□□ 1.68
SMARCB1-201ENST00000263121 P4HBP07237 508 aaKnown RBP25.53■■□□□ 1.68
SMARCB1-201ENST00000263121 SARM1Q6SZW1 724 aa25.53■■□□□ 1.68
SMARCB1-201ENST00000263121 BANK1Q8NDB2 785 aa25.53■■□□□ 1.68
SMARCB1-201ENST00000263121 MORC4Q8TE76 937 aa25.53■■□□□ 1.68
SMARCB1-201ENST00000263121 HSD3B7Q9H2F3 369 aa25.53■■□□□ 1.68
SMARCB1-201ENST00000263121 BMP2KQ9NSY1 1161 aaPredicted RBP25.53■■□□□ 1.68
SMARCB1-201ENST00000263121 TCEAL9Q9UHQ7 104 aa25.53■■□□□ 1.68
SMARCB1-201ENST00000263121 WDR64B1ANS9 1081 aa25.52■■□□□ 1.68
SMARCB1-201ENST00000263121 ADCY5O95622 1261 aa25.52■■□□□ 1.68
SMARCB1-201ENST00000263121 INHBEP58166 350 aa25.52■■□□□ 1.68
SMARCB1-201ENST00000263121 EHHADHQ08426 723 aa25.52■■□□□ 1.68
SMARCB1-201ENST00000263121 ARSHQ5FYA8 562 aa25.52■■□□□ 1.68
SMARCB1-201ENST00000263121 CCDC102AQ96A19 550 aa25.52■■□□□ 1.68
SMARCB1-201ENST00000263121 HHIPL1Q96JK4 782 aa25.52■■□□□ 1.68
SMARCB1-201ENST00000263121 NACC1Q96RE7 527 aa25.52■■□□□ 1.68
SMARCB1-201ENST00000263121 STRNO43815 780 aa25.52■■□□□ 1.68
SMARCB1-201ENST00000263121 PRCPP42785 496 aa25.52■■□□□ 1.68
SMARCB1-201ENST00000263121 PLCB2Q00722 1185 aa25.52■■□□□ 1.68
SMARCB1-201ENST00000263121 PIGOQ8TEQ8 1089 aa25.52■■□□□ 1.68
SMARCB1-201ENST00000263121 BHMT2Q9H2M3 363 aa25.52■■□□□ 1.68
SMARCB1-201ENST00000263121 ZSWIM4Q9H7M6 989 aa25.52■■□□□ 1.68
SMARCB1-201ENST00000263121 SAMM50Q9Y512 469 aa25.52■■□□□ 1.68
SMARCB1-201ENST00000263121 LOXHD1Q8IVV2 1947 aa25.51■■□□□ 1.67
SMARCB1-201ENST00000263121 TMEM88BA6NKF7 163 aa25.51■■□□□ 1.67
SMARCB1-201ENST00000263121 LYPLA2O95372 231 aa25.51■■□□□ 1.67
SMARCB1-201ENST00000263121 TPM4P67936 248 aa25.51■■□□□ 1.67
SMARCB1-201ENST00000263121 SP2Q02086 613 aa25.51■■□□□ 1.67
SMARCB1-201ENST00000263121 COBLL1Q53SF7 1204 aa25.51■■□□□ 1.67
SMARCB1-201ENST00000263121 SEPT14Q6ZU15 432 aa25.51■■□□□ 1.67
SMARCB1-201ENST00000263121 IFNL1Q8IU54 200 aa25.51■■□□□ 1.67
SMARCB1-201ENST00000263121 TRMT44Q8IYL2 757 aaKnown RBP25.51■■□□□ 1.67
SMARCB1-201ENST00000263121 ADSSL1Q8N142 457 aa25.51■■□□□ 1.67
SMARCB1-201ENST00000263121 JPH1Q9HDC5 661 aaPredicted RBP25.51■■□□□ 1.67
SMARCB1-201ENST00000263121 ABT1Q9ULW3 272 aaKnown RBP25.51■■□□□ 1.67
SMARCB1-201ENST00000263121 TOMM70O94826 608 aa25.5■■□□□ 1.67
SMARCB1-201ENST00000263121 QARSP47897 775 aaKnown RBP25.5■■□□□ 1.67
SMARCB1-201ENST00000263121 STK4Q13043 487 aa25.5■■□□□ 1.67
SMARCB1-201ENST00000263121 ZNF792Q3KQV3 632 aa25.5■■□□□ 1.67
SMARCB1-201ENST00000263121 KLHL10Q6JEL2 608 aa25.5■■□□□ 1.67
SMARCB1-201ENST00000263121 SMAP1Q8IYB5 467 aaPredicted RBP25.5■■□□□ 1.67
SMARCB1-201ENST00000263121 BCAS3Q9H6U6 928 aa25.5■■□□□ 1.67
SMARCB1-201ENST00000263121 SLC9A2Q9UBY0 812 aa25.5■■□□□ 1.67
SMARCB1-201ENST00000263121 DOCK5Q9H7D0 1870 aa25.5■■□□□ 1.67
SMARCB1-201ENST00000263121 SYNRGQ9UMZ2 1314 aa25.5■■□□□ 1.67
SMARCB1-201ENST00000263121 FRMD3A2A2Y4 597 aa25.49■■□□□ 1.67
SMARCB1-201ENST00000263121 IDEP14735 1019 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 419.2 ms