RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 POTEMA6NI47 508 aa15.47■□□□□ 0.07
SCARF1-201ENST00000263071 TACC1O75410 805 aa15.47■□□□□ 0.07
SCARF1-201ENST00000263071 BMP15O95972 392 aa15.47■□□□□ 0.07
SCARF1-201ENST00000263071 PAFAH1B1P43034 410 aa15.47■□□□□ 0.07
SCARF1-201ENST00000263071 CFAP58Q5T655 872 aa15.47■□□□□ 0.07
SCARF1-201ENST00000263071 WDR59Q6PJI9 974 aa15.47■□□□□ 0.07
SCARF1-201ENST00000263071 ADAT2Q7Z6V5 191 aaKnown RBP15.47■□□□□ 0.07
SCARF1-201ENST00000263071 MAIP1Q8WWC4 291 aa15.47■□□□□ 0.07
SCARF1-201ENST00000263071 LIMA1Q9UHB6 759 aaKnown RBP15.47■□□□□ 0.07
SCARF1-201ENST00000263071 LGALS16A8MUM7 142 aa15.46■□□□□ 0.07
SCARF1-201ENST00000263071 CNGA1P29973 690 aa15.46■□□□□ 0.07
SCARF1-201ENST00000263071 CCDC15Q0P6D6 951 aa15.46■□□□□ 0.07
SCARF1-201ENST00000263071 SPRED3Q2MJR0 410 aa15.46■□□□□ 0.07
SCARF1-201ENST00000263071 AGAP11Q8TF27 550 aa15.46■□□□□ 0.07
SCARF1-201ENST00000263071 COA7Q96BR5 231 aa15.46■□□□□ 0.07
SCARF1-201ENST00000263071 CCDC51Q96ER9 411 aa15.46■□□□□ 0.07
SCARF1-201ENST00000263071 CCDC87Q9NVE4 849 aa15.46■□□□□ 0.07
SCARF1-201ENST00000263071 ALDH3A1P30838 453 aa15.46■□□□□ 0.07
SCARF1-201ENST00000263071 MDH1P40925 334 aaKnown RBP15.46■□□□□ 0.07
SCARF1-201ENST00000263071 MYBPC3Q14896 1274 aa15.46■□□□□ 0.07
SCARF1-201ENST00000263071 LLGL1Q15334 1064 aa15.46■□□□□ 0.07
SCARF1-201ENST00000263071 ODF2Q5BJF6 829 aa15.46■□□□□ 0.07
SCARF1-201ENST00000263071 TCERG1LQ5VWI1 586 aa15.46■□□□□ 0.07
SCARF1-201ENST00000263071 FAM84BQ96KN1 310 aaPredicted RBP15.46■□□□□ 0.07
SCARF1-201ENST00000263071 SWAP70Q9UH65 585 aa15.46■□□□□ 0.07
SCARF1-201ENST00000263071 SRP68Q9UHB9 627 aaKnown RBP15.46■□□□□ 0.07
SCARF1-201ENST00000263071 SMCO2A6NFE2 343 aa15.46■□□□□ 0.06
SCARF1-201ENST00000263071 A6NHS1 94 aa15.46■□□□□ 0.06
SCARF1-201ENST00000263071 PBX1P40424 430 aa15.46■□□□□ 0.06
SCARF1-201ENST00000263071 GUCY2DQ02846 1103 aa15.46■□□□□ 0.06
SCARF1-201ENST00000263071 RAPGEF1Q13905 1077 aa15.46■□□□□ 0.06
SCARF1-201ENST00000263071 ALS2CLQ60I27 953 aa15.46■□□□□ 0.06
SCARF1-201ENST00000263071 C6orf89Q6UWU4 347 aa15.46■□□□□ 0.06
SCARF1-201ENST00000263071 MAEAQ7L5Y9 396 aa15.46■□□□□ 0.06
SCARF1-201ENST00000263071 ADSSL1Q8N142 457 aa15.46■□□□□ 0.06
SCARF1-201ENST00000263071 UBE2OQ9C0C9 1292 aaKnown RBP15.46■□□□□ 0.06
SCARF1-201ENST00000263071 SMIM23A6NLE4 172 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 TRAF5O00463 557 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 IQCEQ6IPM2 695 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 C8orf74Q6P047 294 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 SH3RF1Q7Z6J0 888 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 SPATA20Q8TB22 786 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 RIOK1Q9BRS2 568 aaKnown RBP15.45■□□□□ 0.06
SCARF1-201ENST00000263071 UNC45AQ9H3U1 944 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 NFU1Q9UMS0 254 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 KLRF2D3W0D1 207 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 PDHA1P08559 390 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 CALM1P0DP23 149 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 CALM2P0DP24 149 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 CALM3P0DP25 149 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 HIBADHP31937 336 aaKnown RBP15.45■□□□□ 0.06
SCARF1-201ENST00000263071 EHHADHQ08426 723 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 PRPF4BQ13523 1007 aaKnown RBP15.45■□□□□ 0.06
SCARF1-201ENST00000263071 KDM7AQ6ZMT4 941 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 RHBDL2Q9NX52 303 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 DNM2P50570 870 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 GALNT17Q6IS24 598 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 SEPT14Q6ZU15 432 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 LRRC47Q8N1G4 583 aaKnown RBP15.45■□□□□ 0.06
SCARF1-201ENST00000263071 MKL1Q969V6 931 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 SLC5A4Q9NY91 659 aa15.45■□□□□ 0.06
SCARF1-201ENST00000263071 GMNCA6NCL1 334 aa15.44■□□□□ 0.06
SCARF1-201ENST00000263071 LRRC53A6NM62 1247 aa15.44■□□□□ 0.06
SCARF1-201ENST00000263071 SLURP2P0DP57 97 aa15.44■□□□□ 0.06
SCARF1-201ENST00000263071 ALDH1B1P30837 517 aa15.44■□□□□ 0.06
SCARF1-201ENST00000263071 NPY5RQ15761 445 aa15.44■□□□□ 0.06
SCARF1-201ENST00000263071 PFKFB3Q16875 520 aaPredicted RBP15.44■□□□□ 0.06
SCARF1-201ENST00000263071 GKAP1Q5VSY0 366 aaPredicted RBP15.44■□□□□ 0.06
SCARF1-201ENST00000263071 ARFGAP2Q8N6H7 521 aa15.44■□□□□ 0.06
SCARF1-201ENST00000263071 P2RX5Q93086 422 aa15.44■□□□□ 0.06
SCARF1-201ENST00000263071 CALML4Q96GE6 196 aa15.44■□□□□ 0.06
SCARF1-201ENST00000263071 RPGRIP1Q96KN7 1286 aa15.44■□□□□ 0.06
SCARF1-201ENST00000263071 SEPT11Q9NVA2 429 aaKnown RBP15.44■□□□□ 0.06
SCARF1-201ENST00000263071 SEC63Q9UGP8 760 aaKnown RBP15.44■□□□□ 0.06
SCARF1-201ENST00000263071 CALML3P27482 149 aa15.44■□□□□ 0.06
SCARF1-201ENST00000263071 FUT2Q10981 343 aa15.44■□□□□ 0.06
SCARF1-201ENST00000263071 TRADDQ15628 312 aa15.44■□□□□ 0.06
SCARF1-201ENST00000263071 SEC16BQ96JE7 1060 aa15.44■□□□□ 0.06
SCARF1-201ENST00000263071 MINPP1Q9UNW1 487 aa15.44■□□□□ 0.06
SCARF1-201ENST00000263071 LOC102724428A0A0B4J2F2 783 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 ZNF24P17028 368 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 KIF11P52732 1056 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 SIK1P57059 783 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 NAALADL2Q58DX5 795 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 SFMBT2Q5VUG0 894 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 TRAPPC11Q7Z392 1133 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 TSEN2Q8NCE0 465 aaKnown RBP15.43■□□□□ 0.06
SCARF1-201ENST00000263071 KCNV2Q8TDN2 545 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 TBCKQ8TEA7 893 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 SH3RF3Q8TEJ3 882 aaPredicted RBP15.43■□□□□ 0.06
SCARF1-201ENST00000263071 ZNF384Q8TF68 577 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 CCDC43Q96MW1 224 aaKnown RBP15.43■□□□□ 0.06
SCARF1-201ENST00000263071 EPB41L5Q9HCM4 733 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 SPDYE5A6NIY4 337 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 DNAJC8O75937 253 aaPredicted RBP15.43■□□□□ 0.06
SCARF1-201ENST00000263071 KSR1Q8IVT5 923 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 ELOA2Q8IYF1 753 aaPredicted RBP15.43■□□□□ 0.06
SCARF1-201ENST00000263071 ZNF34Q8IZ26 560 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 TEX9Q8N6V9 391 aa15.43■□□□□ 0.06
SCARF1-201ENST00000263071 KRT12Q99456 494 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms