RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 SCFD1Q8WVM8 642 aa14.32□□□□□ -0.12
SPTLC1-201ENST00000262554 SLC5A5Q92911 643 aa14.32□□□□□ -0.12
SPTLC1-201ENST00000262554 TEPSINQ96N21 525 aa14.32□□□□□ -0.12
SPTLC1-201ENST00000262554 FGFBP2Q9BYJ0 223 aa14.32□□□□□ -0.12
SPTLC1-201ENST00000262554 IRX2Q9BZI1 471 aaPredicted RBP14.32□□□□□ -0.12
SPTLC1-201ENST00000262554 MRFAP1Q9Y605 127 aa14.32□□□□□ -0.12
SPTLC1-201ENST00000262554 A0A0U1RQJ8 604 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 EML1O00423 815 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 GAS7O60861 476 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 PSMD10O75832 226 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 INPP5BP32019 993 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 KRT83P78385 493 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 OTOP1Q7RTM1 612 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 CCDC170Q8IYT3 715 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 ATRIPQ8WXE1 791 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 REEP2Q9BRK0 252 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 CARD6Q9BX69 1037 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 TANGO6Q9C0B7 1094 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 DEFB129Q9H1M3 183 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 BHMT2Q9H2M3 363 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 SCAF8Q9UPN6 1271 aaKnown RBP14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 SIK3Q9Y2K2 1263 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 NKRFO15226 690 aaKnown RBP eCLIP14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 CTNND1O60716 968 aaKnown RBP14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 PRELPP51888 382 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 UBXN2AP68543 259 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 CDK17Q00537 523 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 ERCC6LQ2NKX8 1250 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 EDRF1Q3B7T1 1238 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 LRRN4CLQ8ND94 238 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 UBXN4Q92575 508 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 AGBL1Q96MI9 1066 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 ZNF577Q9BSK1 485 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 CCDC94Q9BW85 323 aaPredicted RBP14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 WDR11Q9BZH6 1224 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 KIAA1683Q9H0B3 1180 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 KCTD10Q9H3F6 313 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 MMRN2Q9H8L6 949 aa14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 RBBP6Q7Z6E9 1792 aaKnown RBP14.31□□□□□ -0.12
SPTLC1-201ENST00000262554 EFCAB8A8MWE9 144 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 TBCAO75347 108 aaKnown RBP14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 IPO7O95373 1038 aaKnown RBP14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 EGFRP00533 1210 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 MUTP22033 750 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 ARHGAP25P42331 645 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 HSD17B4P51659 736 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 TUBB2AQ13885 445 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 KRT26Q7Z3Y9 468 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 SFR1Q86XK3 245 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 MCF2L2Q86YR7 1114 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 CCDC125Q86Z20 511 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 MICALL2Q8IY33 904 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 HSD17B14Q9BPX1 270 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 TUBB2BQ9BVA1 445 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 HAUS4Q9H6D7 363 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 RGL1Q9NZL6 768 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 BCS1LQ9Y276 419 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 LOXHD1Q8IVV2 1947 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 LTBP3Q9NS15 1303 aa14.3□□□□□ -0.12
SPTLC1-201ENST00000262554 CTAGE9A4FU28 777 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 CHMP2AO43633 222 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 GMPSP49915 693 aaPredicted RBP14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 MARSP56192 900 aaKnown RBP14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 PPP2R3AQ06190 1150 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 CTTNQ14247 550 aaKnown RBP14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 TPH2Q8IWU9 490 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 ZC3H3Q8IXZ2 948 aaKnown RBP14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 HOOK2Q96ED9 719 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 TEKT3Q9BXF9 490 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 NHEJ1Q9H9Q4 299 aaPredicted RBP14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 FAM207AQ9NSI2 230 aaPredicted RBP14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 REXO2Q9Y3B8 237 aaKnown RBP14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 ZNF536O15090 1300 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 DOCK1Q14185 1865 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 EIF3CLB5ME19 914 aaKnown RBP14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 CETN3O15182 167 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 TADA3O75528 432 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 GAP43P17677 238 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 HNRNPH3P31942 346 aaKnown RBP14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 ADAM9Q13443 819 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 KNOP1Q1ED39 458 aaKnown RBP14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 SAMD7Q7Z3H4 446 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 KIAA1328Q86T90 577 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 SLC35F6Q8N357 371 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 NEK11Q8NG66 645 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 DYDC2Q96IM9 177 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 EIF3CQ99613 913 aaKnown RBP14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 MXRA8Q9BRK3 442 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 RUSC1Q9BVN2 902 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 EDEM3Q9BZQ6 932 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 CNOT7Q9UIV1 285 aaKnown RBP14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 HACL1Q9UJ83 578 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 FAM184BQ9ULE4 1060 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 GJA3Q9Y6H8 435 aa14.29□□□□□ -0.12
SPTLC1-201ENST00000262554 SLITRK3O94933 977 aa14.28□□□□□ -0.12
SPTLC1-201ENST00000262554 CASP5P51878 434 aa14.28□□□□□ -0.12
SPTLC1-201ENST00000262554 TBC1D10BQ4KMP7 808 aaPredicted RBP14.28□□□□□ -0.12
SPTLC1-201ENST00000262554 DCAF15Q66K64 600 aa14.28□□□□□ -0.12
SPTLC1-201ENST00000262554 RINT1Q6NUQ1 792 aa14.28□□□□□ -0.12
SPTLC1-201ENST00000262554 ZNF662Q6ZS27 426 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms