RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 POTEBQ6S5H4 581 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 MYCBPAPQ8TBZ2 947 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 AJAP1Q9UKB5 411 aaPredicted RBP14.28□□□□□ -0.12
SNX1-201ENST00000261889 ANKRD31Q8N7Z5 1873 aa14.28□□□□□ -0.12
SNX1-201ENST00000261889 GRID2IPA4D2P6 1211 aa14.27□□□□□ -0.12
SNX1-201ENST00000261889 PPP1R12BO60237 982 aaPredicted RBP14.27□□□□□ -0.12
SNX1-201ENST00000261889 TCP1P17987 556 aaKnown RBP14.27□□□□□ -0.12
SNX1-201ENST00000261889 KCNB1Q14721 858 aa14.27□□□□□ -0.12
SNX1-201ENST00000261889 HERC4Q5GLZ8 1057 aaPredicted RBP14.27□□□□□ -0.12
SNX1-201ENST00000261889 SFMBT2Q5VUG0 894 aa14.27□□□□□ -0.12
SNX1-201ENST00000261889 CNNM4Q6P4Q7 775 aa14.27□□□□□ -0.12
SNX1-201ENST00000261889 FBXL5Q9UKA1 691 aa14.27□□□□□ -0.12
SNX1-201ENST00000261889 NID2Q14112 1375 aa14.27□□□□□ -0.12
SNX1-201ENST00000261889 USP17L15C9J2P7 530 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 USP17L13C9JLJ4 530 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 USP17L11C9JVI0 530 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 USP17L18D6R9N7 530 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 USP17L22D6RA61 530 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 USP17L17D6RBQ6 530 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 USP17L19D6RCP7 530 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 USP17L20D6RJB6 530 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 TTI1O43156 1089 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 UPP2O95045 317 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 USP17L24Q0WX57 530 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 PLS1Q14651 629 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 MAN2A1Q16706 1144 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 USP17L6PQ6QN14 398 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 IFT20Q8IY31 132 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 REXO1Q8N1G1 1221 aaKnown RBP14.27□□□□□ -0.13
SNX1-201ENST00000261889 RETREG2Q8NC44 543 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 CCDC114Q96M63 670 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 ERGIC2Q96RQ1 377 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 NUP58Q9BVL2 599 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 DNAJC17Q9NVM6 304 aaKnown RBP14.27□□□□□ -0.13
SNX1-201ENST00000261889 KIAA1024Q9UPX6 916 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 ATP8A1Q9Y2Q0 1164 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 DLEC1Q9Y238 1755 aa14.27□□□□□ -0.13
SNX1-201ENST00000261889 TMEM110-MUSTN1A8MSY1 372 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 PPP1R37O75864 691 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 SCP2P22307 547 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 MAP2K2P36507 400 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 HSD17B3P37058 310 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 PTK2Q05397 1052 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 LRRC55Q6ZSA7 311 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 KCTD1Q719H9 257 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 CCDC13Q8IYE1 715 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 EYA3Q99504 573 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 SEC63Q9UGP8 760 aaKnown RBP14.26□□□□□ -0.13
SNX1-201ENST00000261889 GOLGA6L7A0A1B0GV03 622 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 M0R2N6 131 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 ADRA2BP18089 450 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 UAP1Q16222 522 aaPredicted RBP14.26□□□□□ -0.13
SNX1-201ENST00000261889 PTGISQ16647 500 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 CCSER1Q9C0I3 900 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 MTFR1LQ9H019 292 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 MEFVO15553 781 aaPredicted RBP14.26□□□□□ -0.13
SNX1-201ENST00000261889 TUBBP07437 444 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 MAGOHP61326 146 aaKnown RBP14.26□□□□□ -0.13
SNX1-201ENST00000261889 SLC9C1Q4G0N8 1177 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 CT47A1Q5JQC4 288 aaPredicted RBP14.26□□□□□ -0.13
SNX1-201ENST00000261889 FAM114A1Q8IWE2 563 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 RDH13Q8NBN7 331 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 MGARPQ8TDB4 240 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 GLG1Q92896 1179 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 MAGOHBQ96A72 148 aaKnown RBP14.26□□□□□ -0.13
SNX1-201ENST00000261889 MXD3Q9BW11 206 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 OSGEPQ9NPF4 335 aa14.26□□□□□ -0.13
SNX1-201ENST00000261889 DUOX1Q9NRD9 1551 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 POTEFA5A3E0 1075 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 POTEIP0CG38 1075 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 HMGB2P26583 209 aaKnown RBP14.25□□□□□ -0.13
SNX1-201ENST00000261889 RPS8P62241 208 aaKnown RBP14.25□□□□□ -0.13
SNX1-201ENST00000261889 C12orf60Q5U649 245 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 POTEGQ6S5H5 508 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 POTEEQ6S8J3 1075 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 IQCKQ8N0W5 287 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 RPGRIP1Q96KN7 1286 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 SPAG5Q96R06 1193 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 SELENOSQ9BQE4 189 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 TSGA10Q9BZW7 698 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.25□□□□□ -0.13
SNX1-201ENST00000261889 DNM1LO00429 736 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 COASYQ13057 564 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 KRT71Q3SY84 523 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 CENPPQ6IPU0 288 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 LBHD1Q9BQE6 289 aaPredicted RBP14.25□□□□□ -0.13
SNX1-201ENST00000261889 BMP2KQ9NSY1 1161 aaPredicted RBP14.25□□□□□ -0.13
SNX1-201ENST00000261889 RTCBQ9Y3I0 505 aaKnown RBP14.25□□□□□ -0.13
SNX1-201ENST00000261889 MPHOSPH10O00566 681 aaKnown RBP14.25□□□□□ -0.13
SNX1-201ENST00000261889 LRRN2O75325 713 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 RASA1P20936 1047 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 PAK2Q13177 524 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 PABPC4Q13310 644 aaKnown RBP eCLIP14.25□□□□□ -0.135e-6■□□□□ 10.8
SNX1-201ENST00000261889 PPP2R5BQ15173 497 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 EMBQ6PCB8 327 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 TAF4BQ92750 862 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 THOC1Q96FV9 657 aaKnown RBP14.25□□□□□ -0.13
SNX1-201ENST00000261889 NCAPGQ9BPX3 1015 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 CD2APQ9Y5K6 639 aa14.25□□□□□ -0.13
SNX1-201ENST00000261889 RSPH10B2B2RC85 870 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms