RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 BICDL2A1A5D9 508 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 PIK3CDO00329 1044 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 CYP2C8P10632 490 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 LBX1P52954 281 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 NAA30Q147X3 362 aaPredicted RBP19.68■□□□□ 0.74
SSB-201ENST00000260956 Q4G0T1 1027 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 MIIPQ5JXC2 388 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 ANKRD23Q86SG2 305 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 GUF1Q8N442 669 aaKnown RBP19.68■□□□□ 0.74
SSB-201ENST00000260956 ANKRD20A12PQ8NF67 263 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 CCDC47Q96A33 483 aaKnown RBP19.68■□□□□ 0.74
SSB-201ENST00000260956 KIFC2Q96AC6 838 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 DESI2Q9BSY9 194 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 KIAA1683Q9H0B3 1180 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 SAGE1Q9NXZ1 904 aa19.68■□□□□ 0.74
SSB-201ENST00000260956 NKRFO15226 690 aaKnown RBP eCLIP19.67■□□□□ 0.74
SSB-201ENST00000260956 CSGALNACT2Q8N6G5 542 aa19.67■□□□□ 0.74
SSB-201ENST00000260956 ERO1AQ96HE7 468 aa19.67■□□□□ 0.74
SSB-201ENST00000260956 KDM3AQ9Y4C1 1321 aa19.67■□□□□ 0.74
SSB-201ENST00000260956 TBX3O15119 743 aa19.66■□□□□ 0.74
SSB-201ENST00000260956 CA12O43570 354 aa19.66■□□□□ 0.74
SSB-201ENST00000260956 HSP90AA2PQ14568 343 aaPredicted RBP19.66■□□□□ 0.74
SSB-201ENST00000260956 ZCWPW2Q504Y3 356 aa19.66■□□□□ 0.74
SSB-201ENST00000260956 POTEEQ6S8J3 1075 aa19.66■□□□□ 0.74
SSB-201ENST00000260956 FASTKD5Q7L8L6 764 aaKnown RBP19.66■□□□□ 0.74
SSB-201ENST00000260956 DNAJC7Q99615 494 aa19.66■□□□□ 0.74
SSB-201ENST00000260956 CFHR5Q9BXR6 569 aa19.66■□□□□ 0.74
SSB-201ENST00000260956 PCDHA12Q9UN75 941 aa19.66■□□□□ 0.74
SSB-201ENST00000260956 AGTPBP1Q9UPW5 1226 aa19.66■□□□□ 0.74
SSB-201ENST00000260956 SLU7O95391 586 aaKnown RBP19.65■□□□□ 0.74
SSB-201ENST00000260956 CYP3A4P08684 503 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 CAP1Q01518 475 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 LRRC55Q6ZSA7 311 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 PROCA1Q8NCQ7 364 aaPredicted RBP19.65■□□□□ 0.74
SSB-201ENST00000260956 LRRN4CLQ8ND94 238 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 DDX12PQ92771 950 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 CNOT6LQ96LI5 555 aaKnown RBP19.65■□□□□ 0.74
SSB-201ENST00000260956 WDR24Q96S15 920 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 FRMD3A2A2Y4 597 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 C19orf81C9J6K1 198 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 PLA2G6O60733 806 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 FOSP01100 380 aaPredicted RBP19.65■□□□□ 0.74
SSB-201ENST00000260956 UBXN1Q04323 297 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 TAF1CQ15572 869 aaPredicted RBP19.65■□□□□ 0.74
SSB-201ENST00000260956 GLIS3Q8NEA6 775 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 CDK5RAP3Q96JB5 506 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 FEZ1Q99689 392 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 SLC39A2Q9NP94 309 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 DNAI1Q9UI46 699 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 PCDHA2Q9Y5H9 948 aa19.65■□□□□ 0.74
SSB-201ENST00000260956 ABCB11O95342 1321 aa19.64■□□□□ 0.74
SSB-201ENST00000260956 A0A0U1RQJ8 604 aa19.64■□□□□ 0.73
SSB-201ENST00000260956 FAM86B1E9PN63 330 aa19.64■□□□□ 0.73
SSB-201ENST00000260956 ALDH1A1P00352 501 aa19.64■□□□□ 0.73
SSB-201ENST00000260956 FAM86B2P0C5J1 330 aa19.64■□□□□ 0.73
SSB-201ENST00000260956 DNM2P50570 870 aa19.64■□□□□ 0.73
SSB-201ENST00000260956 SPICE1Q8N0Z3 855 aa19.64■□□□□ 0.73
SSB-201ENST00000260956 CPLX3Q8WVH0 158 aa19.64■□□□□ 0.73
SSB-201ENST00000260956 ATRIPQ8WXE1 791 aa19.64■□□□□ 0.73
SSB-201ENST00000260956 C12orf42Q96LP6 360 aa19.64■□□□□ 0.73
SSB-201ENST00000260956 TUBGCP2Q9BSJ2 902 aa19.64■□□□□ 0.73
SSB-201ENST00000260956 LRRC27Q9C0I9 530 aa19.64■□□□□ 0.73
SSB-201ENST00000260956 RANBP17Q9H2T7 1088 aaKnown RBP19.64■□□□□ 0.73
SSB-201ENST00000260956 VAV3Q9UKW4 847 aa19.64■□□□□ 0.73
SSB-201ENST00000260956 LOC285556D6RIA3 1793 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 TTC26A0AVF1 554 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 RAD21O60216 631 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 PEX10O60683 326 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 MED24O75448 989 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 CCDC175P0C221 793 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 VCAM1P19320 739 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 CTCFP49711 727 aaPredicted RBP19.63■□□□□ 0.73
SSB-201ENST00000260956 COASYQ13057 564 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 PSMD2Q13200 908 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 DYMQ7RTS9 669 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 TMTC1Q8IUR5 882 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 SLFN12Q8IYM2 578 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 ERGIC2Q96RQ1 377 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 NT5C3AQ9H0P0 336 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 ARHGEF10LQ9HCE6 1279 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 CAPN11Q9UMQ6 739 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 ADGRA2Q96PE1 1338 aa19.63■□□□□ 0.73
SSB-201ENST00000260956 IGLV3-22A0A075B6J6 115 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 POTEB3A0JP26 581 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 B4DLN1 442 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 STAT3P40763 770 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 MEA1Q16626 185 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 USH1GQ495M9 461 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 POTEBQ6S5H4 581 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 FAM114A1Q8IWE2 563 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 ASCC2Q9H1I8 757 aaPredicted RBP19.62■□□□□ 0.73
SSB-201ENST00000260956 VCPKMTQ9H867 229 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 ZCCHC17Q9NP64 241 aaKnown RBP19.62■□□□□ 0.73
SSB-201ENST00000260956 BRCA2P51587 3418 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 GPR25O00155 361 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 SPATA31C1P0DKV0 1188 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 CYP11B2P19099 503 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 ARHGAP25P42331 645 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 SLC12A3P55017 1021 aa19.62■□□□□ 0.73
SSB-201ENST00000260956 LRRC63Q05C16 580 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms