RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 LMNB1P20700 586 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 INPP1P49441 399 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 FAM102BQ5T8I3 360 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 NUDCD3Q8IVD9 361 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 TRIM56Q9BRZ2 755 aaKnown RBP10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 CTIFO43310 598 aaKnown RBP10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 DCTN3O75935 186 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 SCP2P22307 547 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 PTPREP23469 700 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 CCNE1P24864 410 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 HSPA2P54652 639 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 RSBN1LQ6PCB5 846 aaPredicted RBP10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 MAP7D3Q8IWC1 876 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 NDST4Q9H3R1 872 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 USP40Q9NVE5 1235 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 ADAMTS1Q9UHI8 967 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 DCTN4Q9UJW0 460 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 PRDM4Q9UKN5 801 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 KRT3P12035 628 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 POLD1P28340 1107 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 PCYT1AP49585 367 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 IQCB1Q15051 598 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 TUBB6Q9BUF5 446 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 SORBS3O60504 671 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 FKBP3Q00688 224 aaKnown RBP10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 SUGCTQ9HAC7 445 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 COL4A3BPQ9Y5P4 624 aa10.53□□□□□ -0.72
CTDSPL2-201ENST00000260327 MEIS1O00470 390 aa10.52□□□□□ -0.72
CTDSPL2-201ENST00000260327 GPC4O75487 556 aa10.52□□□□□ -0.72
CTDSPL2-201ENST00000260327 STAM2O75886 525 aa10.52□□□□□ -0.72
CTDSPL2-201ENST00000260327 MCAMP43121 646 aa10.52□□□□□ -0.72
CTDSPL2-201ENST00000260327 DYNLT1P63172 113 aa10.52□□□□□ -0.72
CTDSPL2-201ENST00000260327 PDCD2Q16342 344 aaPredicted RBP10.52□□□□□ -0.72
CTDSPL2-201ENST00000260327 C1orf146Q5VVC0 180 aa10.52□□□□□ -0.72
CTDSPL2-201ENST00000260327 KIRREL3Q8IZU9 778 aa10.52□□□□□ -0.72
CTDSPL2-201ENST00000260327 ZNF653Q96CK0 615 aa10.52□□□□□ -0.72
CTDSPL2-201ENST00000260327 CHMP6Q96FZ7 201 aa10.52□□□□□ -0.72
CTDSPL2-201ENST00000260327 CUEDC2Q9H467 287 aa10.52□□□□□ -0.72
CTDSPL2-201ENST00000260327 PPARGC1AQ9UBK2 798 aaKnown RBP10.52□□□□□ -0.72
CTDSPL2-201ENST00000260327 NEDD4P46934 1319 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 ZNF185O15231 689 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 CDC27P30260 824 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 SHC4Q6S5L8 630 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 LONP2Q86WA8 852 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 METTL14Q9HCE5 456 aaKnown RBP10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 CCNL1Q9UK58 526 aaPredicted RBP10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 PACSIN2Q9UNF0 486 aaPredicted RBP10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 BZW2Q9Y6E2 419 aaKnown RBP10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 H7C0C1 242 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 EIF3HO15372 352 aaKnown RBP eCLIP10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 LIFRP42702 1097 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 ATP5OP48047 213 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 NSMFQ6X4W1 530 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 IL25Q9H293 177 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 MAGEF1Q9HAY2 307 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 PRPF3O43395 683 aaKnown RBP10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 SERPING1P05155 500 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 BTDP43251 543 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 CORO7P57737 925 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 SRRM1Q8IYB3 904 aaKnown RBP10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 COA7Q96BR5 231 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 ZBTB10Q96DT7 871 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 MAGED2Q9UNF1 606 aaPredicted RBP10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 AFPP02771 609 aaKnown RBP10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 KITP10721 976 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 PRCPP42785 496 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 MYL7Q01449 175 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 TTC17Q96AE7 1141 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 DRC3Q9H069 523 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 NUB1Q9Y5A7 615 aa10.52□□□□□ -0.73
CTDSPL2-201ENST00000260327 MAPK4P31152 587 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 GFPT1Q06210 699 aaPredicted RBP10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 SLFN12Q8IYM2 578 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 MCUQ8NE86 351 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 FAM161BQ96MY7 647 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 OSBPL9Q96SU4 736 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 EPN3Q9H201 632 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 DISC1Q9NRI5 854 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 ROBO2Q9HCK4 1378 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 LAD1O00515 517 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 HMGB2P26583 209 aaKnown RBP10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 OLFML2BQ68BL8 750 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 AK8Q96MA6 479 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 CCT8L2Q96SF2 557 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 SNAP23O00161 211 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 SCNN1DP51172 638 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 DEUP1Q05D60 604 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 GABPAQ06546 454 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 USP17L2Q6R6M4 530 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 PIGSQ96S52 555 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 KIF9Q9HAQ2 790 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 GINS2Q9Y248 185 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 HADHQ16836 314 aaKnown RBP10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 GLE1Q53GS7 698 aaKnown RBP10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 C10orf76Q5T2E6 689 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 TMEM154Q6P9G4 183 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 STOX1Q6ZVD7 989 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 SUPT20HQ8NEM7 779 aa10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.51□□□□□ -0.73
CTDSPL2-201ENST00000260327 DYNLL2Q96FJ2 89 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms