RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CAP2P40123 477 aa16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 MTMR2Q13614 643 aa16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 PDIA5Q14554 519 aa16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 SFR1Q86XK3 245 aa16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 STK17AQ9UEE5 414 aa16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 DUSP10Q9Y6W6 482 aa16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 ZSCAN26Q16670 478 aa16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 LONRF2Q1L5Z9 754 aa16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 DNAAF5Q86Y56 855 aa16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 CCDC65Q8IXS2 484 aa16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 GPR161Q8N6U8 529 aaKnown RBP16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 DYDC2Q96IM9 177 aa16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 FUT8Q9BYC5 575 aa16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 CNOT7Q9UIV1 285 aaKnown RBP16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 PCDHB13Q9Y5F0 798 aa16.19■□□□□ 0.18
TRAFD1-201ENST00000257604 TMEM150BA6NC51 233 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 ARP10275 920 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 CYP26C1Q6V0L0 522 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 CHURC1Q8WUH1 139 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 TCEAL9Q9UHQ7 104 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 EPN1Q9Y6I3 576 aaPredicted RBP16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 MYH4Q9Y623 1939 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 TUBB4AP04350 444 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 EEF1GP26641 437 aaKnown RBP16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 DNM2P50570 870 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 CCDC122Q5T0U0 273 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 PPP1R18Q6NYC8 613 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 ERMNQ8TAM6 284 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 CCDC102AQ96A19 550 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 PANX2Q96RD6 677 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 NDST4Q9H3R1 872 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 THAP9Q9H5L6 903 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 VCPKMTQ9H867 229 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 EMILIN3Q9NT22 766 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 HDAC6Q9UBN7 1215 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 ADAM21Q9UKJ8 722 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 TMX2Q9Y320 296 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 ZMYND10O75800 440 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 GCFC2P16383 781 aaKnown RBP16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 PBX1P40424 430 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 MYCT1Q8N699 235 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 GMCL1Q96IK5 515 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 REEP2Q9BRK0 252 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 NT5C3AQ9H0P0 336 aa16.18■□□□□ 0.18
TRAFD1-201ENST00000257604 DLEC1Q9Y238 1755 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 CNTNAP1P78357 1384 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 TULP2O00295 520 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 TBCAO75347 108 aaKnown RBP16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 MYBP10242 640 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 CYP11B2P19099 503 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 MRPS25P82663 173 aaKnown RBP16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 ADAM9Q13443 819 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 ZC2HC1CQ53FD0 456 aaPredicted RBP16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 HAUS3Q68CZ6 603 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 GOLGA1Q92805 767 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 EIF2AK1Q9BQI3 630 aaKnown RBP16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 ZNF577Q9BSK1 485 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 DEFB129Q9H1M3 183 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 FEZ2Q9UHY8 353 aaPredicted RBP16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 MYO3BQ8WXR4 1341 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 USP11P51784 963 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 FAM114A1Q8IWE2 563 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 GMCL1P1Q8NEA9 526 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 MTMR8Q96EF0 704 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 CCDC43Q96MW1 224 aaKnown RBP16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 WDR18Q9BV38 432 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 RUSC1Q9BVN2 902 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 MRIQ9BWK5 157 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 HACL1Q9UJ83 578 aa16.17■□□□□ 0.18
TRAFD1-201ENST00000257604 TESPA1A2RU30 521 aaPredicted RBP16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 AKR1B10O60218 316 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 SRGAP2O75044 1071 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 FAM193AP78312 1265 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 RSRC2Q7L4I2 434 aaKnown RBP16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 TMTC1Q8IUR5 882 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 SLFN12Q8IYM2 578 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 TXLNBQ8N3L3 684 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 DNAJC19Q96DA6 116 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 CLSTN1O94985 981 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 ASNSP08243 561 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 NMT1P30419 496 aaKnown RBP16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 CHMP4BP1P59074 171 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 GPS2Q13227 327 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 KCTD19Q17RG1 926 aaPredicted RBP16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 ARHGAP27Q6ZUM4 889 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 CCDC42Q96M95 316 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 GMLQ99445 158 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 RABGAP1Q9Y3P9 1069 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 NDUFA10O95299 355 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 NR2F2P24468 414 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 ARSHQ5FYA8 562 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 NLGN2Q8NFZ4 835 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 IL31RAQ8NI17 732 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 SECISBP2LQ93073 1101 aaKnown RBP16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 WNK4Q96J92 1243 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 PNKPQ96T60 521 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 RSPH14Q9UHP6 348 aa16.16■□□□□ 0.18
TRAFD1-201ENST00000257604 NFKBIEO00221 500 aa16.15■□□□□ 0.18
TRAFD1-201ENST00000257604 MYL1P05976 194 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms