RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 MCM6Q14566 821 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 IRF2BP1Q8IU81 584 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 MB21D1Q8N884 522 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 CCDC102AQ96A19 550 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 HHIPL1Q96JK4 782 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 HOMER2Q9NSB8 354 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 BLOC1S4Q9NUP1 217 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 BTBD7Q9P203 1132 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 CGNQ9P2M7 1197 aaKnown RBP12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 RIPK3Q9Y572 518 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 KDM3AQ9Y4C1 1321 aa12.69□□□□□ -0.38
CLUHP3-201ENST00000254109 TESPA1A2RU30 521 aaPredicted RBP12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 MYMKA6NI61 221 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 IGF2BP3O00425 579 aaKnown RBP eCLIP12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 OPLAHO14841 1288 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 SLC26A4O43511 780 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 FGFR1OPO95684 399 aaKnown RBP12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 DNM2P50570 870 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 FXR1P51114 621 aaKnown RBP eCLIP12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 GNG11P61952 73 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 PSMD2Q13200 908 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 PLS1Q14651 629 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 TSR1Q2NL82 804 aaKnown RBP12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 DEFB115Q30KQ5 88 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 TMEM119Q4V9L6 283 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 ANKRD40Q6AI12 368 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 USP17L6PQ6QN14 398 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 ANKRD23Q86SG2 305 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 TBC1D5Q92609 795 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 HAS1Q92839 578 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 PAGR1Q9BTK6 254 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 ANO3Q9BYT9 981 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 NT5C3AQ9H0P0 336 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 TXNRD2Q9NNW7 524 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 BMP2KQ9NSY1 1161 aaPredicted RBP12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 ABHD10Q9NUJ1 306 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 ZNF214Q9UL59 606 aaPredicted RBP12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 MYPNQ86TC9 1320 aa12.68□□□□□ -0.38
CLUHP3-201ENST00000254109 CYP3A7-CYP3A51PA0A087WV96 503 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 MANSC4A6NHS7 340 aaPredicted RBP12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 AOC2O75106 756 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 URI1O94763 535 aaPredicted RBP12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 FCER1AP12319 257 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 ALAS1P13196 640 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 FECHP22830 423 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 CYP3A7P24462 503 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 TRAF1Q13077 416 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 PABPC4Q13310 644 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 MUM1L1Q5H9M0 696 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 MOXD1Q6UVY6 613 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 CYP26C1Q6V0L0 522 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 LBX2Q6XYB7 198 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 SLFN12Q8IYM2 578 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 DUSP9Q99956 384 aaKnown RBP12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 DESI2Q9BSY9 194 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 A0A0G2JMZ2 1700 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 SPDYE3A6NKU9 549 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 CNMDO75829 334 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 FOSP01100 380 aaPredicted RBP12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 IDEP14735 1019 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 KRT9P35527 623 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 MTIF2P46199 727 aaKnown RBP12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 MTF1Q14872 753 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 SNRNP48Q6IEG0 339 aaKnown RBP12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 RAD9BQ6WBX8 426 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 DYMQ7RTS9 669 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 TUBGCP2Q9BSJ2 902 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 NUP58Q9BVL2 599 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 SLC39A2Q9NP94 309 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 RBPJLQ9UBG7 517 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 ADGRG1Q9Y653 693 aa12.67□□□□□ -0.38
CLUHP3-201ENST00000254109 RASSF10A6NK89 507 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 NFIBO00712 420 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 FDX1P10109 184 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 Q3C1V9 767 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 HYIQ5T013 277 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 CENPPQ6IPU0 288 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 KIAA0895Q8NCT3 520 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 ZNF507Q8TCN5 953 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 CLEC4DQ8WXI8 215 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 DDX12PQ92771 950 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 CAPNS2Q96L46 248 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 CNOT6LQ96LI5 555 aaKnown RBP12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 NUDT12Q9BQG2 462 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 R3HDMLQ9H3Y0 253 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 PNMA3Q9UL41 463 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 SLC45A1Q9Y2W3 748 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 ABCB11O95342 1321 aa12.66□□□□□ -0.38
CLUHP3-201ENST00000254109 B4DLN1 442 aa12.65□□□□□ -0.38
CLUHP3-201ENST00000254109 MEIS2O14770 477 aa12.65□□□□□ -0.38
CLUHP3-201ENST00000254109 KIF5CO60282 957 aa12.65□□□□□ -0.38
CLUHP3-201ENST00000254109 HOXA13P31271 388 aaPredicted RBP12.65□□□□□ -0.38
CLUHP3-201ENST00000254109 STAT3P40763 770 aa12.65□□□□□ -0.38
CLUHP3-201ENST00000254109 NAA30Q147X3 362 aaPredicted RBP12.65□□□□□ -0.38
CLUHP3-201ENST00000254109 FKBP15Q5T1M5 1219 aa12.65□□□□□ -0.38
CLUHP3-201ENST00000254109 IFNL1Q8IU54 200 aa12.65□□□□□ -0.38
CLUHP3-201ENST00000254109 GUF1Q8N442 669 aaKnown RBP12.65□□□□□ -0.38
CLUHP3-201ENST00000254109 RETREG2Q8NC44 543 aa12.65□□□□□ -0.38
CLUHP3-201ENST00000254109 MNS1Q8NEH6 495 aa12.65□□□□□ -0.38
CLUHP3-201ENST00000254109 OR8K1Q8NGG5 319 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms