RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 PDE4DQ08499 809 aa22.37■■□□□ 1.17
RARA-201ENST00000254066 TRAF1Q13077 416 aa22.37■■□□□ 1.17
RARA-201ENST00000254066 TRPM8Q7Z2W7 1104 aa22.37■■□□□ 1.17
RARA-201ENST00000254066 TEX9Q8N6V9 391 aa22.37■■□□□ 1.17
RARA-201ENST00000254066 SAMD15Q9P1V8 674 aa22.37■■□□□ 1.17
RARA-201ENST00000254066 LAD1O00515 517 aa22.37■■□□□ 1.17
RARA-201ENST00000254066 CTNND1O60716 968 aaKnown RBP22.37■■□□□ 1.17
RARA-201ENST00000254066 CSB-PGBD3P0DP91 1061 aa22.37■■□□□ 1.17
RARA-201ENST00000254066 NQO1P15559 274 aaKnown RBP22.37■■□□□ 1.17
RARA-201ENST00000254066 KRT71Q3SY84 523 aa22.37■■□□□ 1.17
RARA-201ENST00000254066 CNNM4Q6P4Q7 775 aa22.37■■□□□ 1.17
RARA-201ENST00000254066 LDHAL6AQ6ZMR3 332 aa22.37■■□□□ 1.17
RARA-201ENST00000254066 TMC3Q7Z5M5 1100 aa22.37■■□□□ 1.17
RARA-201ENST00000254066 PNMA8AQ86V59 439 aaPredicted RBP22.37■■□□□ 1.17
RARA-201ENST00000254066 KLHL7Q8IXQ5 586 aa22.37■■□□□ 1.17
RARA-201ENST00000254066 CPSF2Q9P2I0 782 aaKnown RBP22.37■■□□□ 1.17
RARA-201ENST00000254066 RPS6KL1Q9Y6S9 549 aa22.37■■□□□ 1.17
RARA-201ENST00000254066 A6NHS1 94 aa22.36■■□□□ 1.17
RARA-201ENST00000254066 SART1O43290 800 aaKnown RBP22.36■■□□□ 1.17
RARA-201ENST00000254066 FOXR2Q6PJQ5 311 aa22.36■■□□□ 1.17
RARA-201ENST00000254066 MAGEB6Q8N7X4 407 aa22.36■■□□□ 1.17
RARA-201ENST00000254066 GBP7Q8N8V2 638 aaPredicted RBP22.36■■□□□ 1.17
RARA-201ENST00000254066 NSRP1Q9H0G5 558 aaKnown RBP22.36■■□□□ 1.17
RARA-201ENST00000254066 SLITRK6Q9H5Y7 841 aa22.36■■□□□ 1.17
RARA-201ENST00000254066 TNS1Q9HBL0 1735 aaKnown RBP22.36■■□□□ 1.17
RARA-201ENST00000254066 CNTNAP5Q8WYK1 1306 aa22.36■■□□□ 1.17
RARA-201ENST00000254066 EME2A4GXA9 379 aaPredicted RBP22.36■■□□□ 1.17
RARA-201ENST00000254066 PLEKHA8P1O95397 391 aa22.36■■□□□ 1.17
RARA-201ENST00000254066 FTCDO95954 541 aa22.36■■□□□ 1.17
RARA-201ENST00000254066 CABP4P57796 275 aa22.36■■□□□ 1.17
RARA-201ENST00000254066 ZSCAN10Q96SZ4 725 aaPredicted RBP22.36■■□□□ 1.17
RARA-201ENST00000254066 ZBTB3Q9H5J0 574 aa22.36■■□□□ 1.17
RARA-201ENST00000254066 FAM114A2Q9NRY5 505 aa22.36■■□□□ 1.17
RARA-201ENST00000254066 SLC4A4Q9Y6R1 1079 aa22.36■■□□□ 1.17
RARA-201ENST00000254066 F8VZ95 297 aa22.35■■□□□ 1.17
RARA-201ENST00000254066 FAM182BQ5T319 152 aa22.35■■□□□ 1.17
RARA-201ENST00000254066 CROCCP2Q86T23 111 aa22.35■■□□□ 1.17
RARA-201ENST00000254066 WNK3Q9BYP7 1800 aa22.35■■□□□ 1.17
RARA-201ENST00000254066 PDE8BO95263 885 aa22.35■■□□□ 1.17
RARA-201ENST00000254066 SCG2P13521 617 aa22.35■■□□□ 1.17
RARA-201ENST00000254066 AMPD3Q01432 767 aa22.35■■□□□ 1.17
RARA-201ENST00000254066 EHHADHQ08426 723 aa22.35■■□□□ 1.17
RARA-201ENST00000254066 TROAPQ12815 778 aa22.35■■□□□ 1.17
RARA-201ENST00000254066 RPS6KA1Q15418 735 aa22.35■■□□□ 1.17
RARA-201ENST00000254066 TBC1D1Q86TI0 1168 aaPredicted RBP22.35■■□□□ 1.17
RARA-201ENST00000254066 ENAHQ8N8S7 591 aaPredicted RBP22.35■■□□□ 1.17
RARA-201ENST00000254066 TRIM9Q9C026 710 aa22.35■■□□□ 1.17
RARA-201ENST00000254066 RREB1Q92766 1687 aa22.34■■□□□ 1.17
RARA-201ENST00000254066 PHKA1P46020 1223 aa22.34■■□□□ 1.17
RARA-201ENST00000254066 SETDB1Q15047 1291 aa22.34■■□□□ 1.17
RARA-201ENST00000254066 DDB1Q16531 1140 aa22.34■■□□□ 1.17
RARA-201ENST00000254066 CCDC38Q502W7 563 aa22.34■■□□□ 1.17
RARA-201ENST00000254066 C10orf76Q5T2E6 689 aa22.34■■□□□ 1.17
RARA-201ENST00000254066 IFIT1BQ5T764 474 aaKnown RBP22.34■■□□□ 1.17
RARA-201ENST00000254066 GIGYF2Q6Y7W6 1299 aaKnown RBP22.34■■□□□ 1.17
RARA-201ENST00000254066 PGM2Q96G03 612 aa22.34■■□□□ 1.17
RARA-201ENST00000254066 AK8Q96MA6 479 aa22.34■■□□□ 1.17
RARA-201ENST00000254066 PANK4Q9NVE7 773 aa22.34■■□□□ 1.17
RARA-201ENST00000254066 CEP72Q9P209 647 aa22.34■■□□□ 1.17
RARA-201ENST00000254066 L3MBTL1Q9Y468 752 aa22.34■■□□□ 1.17
RARA-201ENST00000254066 RGPD5Q99666 1765 aa22.34■■□□□ 1.17
RARA-201ENST00000254066 DLEC1Q9Y238 1755 aa22.34■■□□□ 1.17
RARA-201ENST00000254066 ABLIM1O14639 778 aa22.33■■□□□ 1.17
RARA-201ENST00000254066 PCP11498 1178 aaKnown RBP22.33■■□□□ 1.17
RARA-201ENST00000254066 KLRC1P26715 233 aa22.33■■□□□ 1.17
RARA-201ENST00000254066 MMP13P45452 471 aa22.33■■□□□ 1.17
RARA-201ENST00000254066 USP11P51784 963 aa22.33■■□□□ 1.17
RARA-201ENST00000254066 STK4Q13043 487 aa22.33■■□□□ 1.17
RARA-201ENST00000254066 SLC18A3Q16572 532 aa22.33■■□□□ 1.17
RARA-201ENST00000254066 TDRD12Q587J7 1177 aaKnown RBP22.33■■□□□ 1.17
RARA-201ENST00000254066 ANKS1AQ92625 1134 aa22.33■■□□□ 1.17
RARA-201ENST00000254066 ARAP2Q8WZ64 1704 aa22.33■■□□□ 1.17
RARA-201ENST00000254066 NEFHP12036 1026 aa22.33■■□□□ 1.17
RARA-201ENST00000254066 TSHZ1Q6ZSZ6 1077 aa22.33■■□□□ 1.17
RARA-201ENST00000254066 ZBTB38Q8NAP3 1195 aaPredicted RBP22.33■■□□□ 1.17
RARA-201ENST00000254066 SPATA5Q8NB90 893 aa22.33■■□□□ 1.17
RARA-201ENST00000254066 MYH7BA7E2Y1 1941 aa22.33■■□□□ 1.17
RARA-201ENST00000254066 BACH1O14867 736 aa22.32■■□□□ 1.16
RARA-201ENST00000254066 PPFIA2O75334 1257 aa22.32■■□□□ 1.16
RARA-201ENST00000254066 PFKFB3Q16875 520 aaPredicted RBP22.32■■□□□ 1.16
RARA-201ENST00000254066 SFMBT2Q5VUG0 894 aa22.32■■□□□ 1.16
RARA-201ENST00000254066 ATXN2LQ8WWM7 1075 aaKnown RBP22.32■■□□□ 1.16
RARA-201ENST00000254066 NEUROG2Q9H2A3 272 aa22.32■■□□□ 1.16
RARA-201ENST00000254066 SH3GLB2Q9NR46 395 aa22.32■■□□□ 1.16
RARA-201ENST00000254066 hCG_1642624A0A1W2PR95 340 aa22.32■■□□□ 1.16
RARA-201ENST00000254066 PGRMC1O00264 195 aaKnown RBP22.32■■□□□ 1.16
RARA-201ENST00000254066 DIAPH2O60879 1101 aa22.32■■□□□ 1.16
RARA-201ENST00000254066 KIF4AO95239 1232 aa22.32■■□□□ 1.16
RARA-201ENST00000254066 MMEP08473 750 aa22.32■■□□□ 1.16
RARA-201ENST00000254066 PEX19P40855 299 aa22.32■■□□□ 1.16
RARA-201ENST00000254066 SPDYE1Q8NFV5 336 aaPredicted RBP22.32■■□□□ 1.16
RARA-201ENST00000254066 SEMA6BQ9H3T3 888 aa22.32■■□□□ 1.16
RARA-201ENST00000254066 ATP6V0A2Q9Y487 856 aa22.32■■□□□ 1.16
RARA-201ENST00000254066 PRKAB2O43741 272 aa22.31■■□□□ 1.16
RARA-201ENST00000254066 WFS1O76024 890 aa22.31■■□□□ 1.16
RARA-201ENST00000254066 NUDT17P0C025 328 aa22.31■■□□□ 1.16
RARA-201ENST00000254066 PDCD2Q16342 344 aaPredicted RBP22.31■■□□□ 1.16
RARA-201ENST00000254066 TXLNGYQ9BZA5 131 aa22.31■■□□□ 1.16
RARA-201ENST00000254066 CNNM1Q9NRU3 951 aa22.31■■□□□ 1.16
RARA-201ENST00000254066 MEGF6O75095 1541 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms