RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 FAM83BQ5T0W9 1011 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 ANGEL2Q5VTE6 544 aaKnown RBP20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 MOXD1Q6UVY6 613 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 SMCR8Q8TEV9 937 aaPredicted RBP20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 TBC1D5Q92609 795 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 ST7Q9NRC1 585 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 ARGLU1Q9NWB6 273 aaPredicted RBP20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 DUSP10Q9Y6W6 482 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 MSH4O15457 936 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 DDNO94850 711 aaPredicted RBP20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 FGFR1OPO95684 399 aaKnown RBP20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 KRT18P05783 430 aaKnown RBP20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 SPATA31C1P0DKV0 1188 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 CYP4A11Q02928 519 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 SAMD1Q6SPF0 538 aaPredicted RBP20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 TMCO3Q6UWJ1 677 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 KRT26Q7Z3Y9 468 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 KIAA1328Q86T90 577 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 CCDC65Q8IXS2 484 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 KRT222Q8N1A0 295 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 SCFD1Q8WVM8 642 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 RABGGTAQ92696 567 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 TANGO6Q9C0B7 1094 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 MYO1AQ9UBC5 1043 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 HDAC6Q9UBN7 1215 aa20.71■□□□□ 0.91
PDLIM4-201ENST00000253754 ZNF263O14978 683 aa20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 ZRANB2O95218 330 aaKnown RBP eCLIP20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 CYLC1P35663 651 aaPredicted RBP20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 STAT2P52630 851 aa20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 CCDC174Q6PII3 467 aa20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 CCDC84Q86UT8 332 aaPredicted RBP20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 JAKMIP2Q96AA8 810 aa20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 HAUS4Q9H6D7 363 aa20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 POLD4Q9HCU8 107 aa20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 PHF20L1A8MW92 1017 aa20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 PNMA6AP0CW24 399 aaPredicted RBP20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 CASP5P51878 434 aa20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 AMPD2Q01433 879 aa20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 NBPF12Q5TAG4 269 aaPredicted RBP20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 PRAMEF18Q5VWM3 479 aa20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 C9orf131Q5VYM1 1079 aa20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 BCAS3Q9H6U6 928 aa20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 TMX2Q9Y320 296 aa20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 COL4A3BPQ9Y5P4 624 aa20.7■□□□□ 0.9
PDLIM4-201ENST00000253754 ASNSP08243 561 aa20.69■□□□□ 0.9
PDLIM4-201ENST00000253754 KRT83P78385 493 aa20.69■□□□□ 0.9
PDLIM4-201ENST00000253754 FKBP3Q00688 224 aaKnown RBP20.69■□□□□ 0.9
PDLIM4-201ENST00000253754 HAUS3Q68CZ6 603 aa20.69■□□□□ 0.9
PDLIM4-201ENST00000253754 ARHGAP20Q9P2F6 1191 aa20.69■□□□□ 0.9
PDLIM4-201ENST00000253754 ABCB11O95342 1321 aa20.69■□□□□ 0.9
PDLIM4-201ENST00000253754 LRRC53A6NM62 1247 aa20.69■□□□□ 0.9
PDLIM4-201ENST00000253754 EIF3CLB5ME19 914 aaKnown RBP20.69■□□□□ 0.9
PDLIM4-201ENST00000253754 UBXN2AP68543 259 aa20.69■□□□□ 0.9
PDLIM4-201ENST00000253754 CCDC40Q4G0X9 1142 aa20.69■□□□□ 0.9
PDLIM4-201ENST00000253754 CEP112Q8N8E3 955 aa20.69■□□□□ 0.9
PDLIM4-201ENST00000253754 ZFP91Q96JP5 570 aaPredicted RBP20.69■□□□□ 0.9
PDLIM4-201ENST00000253754 EIF3CQ99613 913 aaKnown RBP20.69■□□□□ 0.9
PDLIM4-201ENST00000253754 VAV3Q9UKW4 847 aa20.69■□□□□ 0.9
PDLIM4-201ENST00000253754 SMCHD1A6NHR9 2005 aa20.69■□□□□ 0.9
PDLIM4-201ENST00000253754 CFBP00751 764 aa20.68■□□□□ 0.9
PDLIM4-201ENST00000253754 FOSP01100 380 aaPredicted RBP20.68■□□□□ 0.9
PDLIM4-201ENST00000253754 ATP1A1P05023 1023 aaKnown RBP20.68■□□□□ 0.9
PDLIM4-201ENST00000253754 HIRAP54198 1017 aaPredicted RBP20.68■□□□□ 0.9
PDLIM4-201ENST00000253754 APBA1Q02410 837 aa20.68■□□□□ 0.9
PDLIM4-201ENST00000253754 KCNMA1Q12791 1236 aa20.68■□□□□ 0.9
PDLIM4-201ENST00000253754 RRAGAQ7L523 313 aa20.68■□□□□ 0.9
PDLIM4-201ENST00000253754 CCDC170Q8IYT3 715 aa20.68■□□□□ 0.9
PDLIM4-201ENST00000253754 GLIS2Q9BZE0 524 aaPredicted RBP20.68■□□□□ 0.9
PDLIM4-201ENST00000253754 KCTD10Q9H3F6 313 aa20.68■□□□□ 0.9
PDLIM4-201ENST00000253754 ANKZF1Q9H8Y5 726 aa20.68■□□□□ 0.9
PDLIM4-201ENST00000253754 EMILIN3Q9NT22 766 aa20.68■□□□□ 0.9
PDLIM4-201ENST00000253754 MYO6Q9UM54 1294 aa20.68■□□□□ 0.9
PDLIM4-201ENST00000253754 PLAGL2Q9UPG8 496 aa20.68■□□□□ 0.9
PDLIM4-201ENST00000253754 FRMD3A2A2Y4 597 aa20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 EML1O00423 815 aa20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 RPA1P27694 616 aa20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 ZNF76P36508 570 aa20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 BMS1Q14692 1282 aaKnown RBP20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 CC2D1AQ6P1N0 951 aaPredicted RBP20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 CCDC42Q96M95 316 aa20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 GOPCQ9HD26 462 aa20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 GGA3Q9NZ52 723 aa20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 SYNPO2Q9UMS6 1093 aa20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 POLR2AP24928 1970 aaKnown RBP20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 TBX3O15119 743 aa20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 CIITAP33076 1130 aa20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 GIT2Q14161 759 aa20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 ERMNQ8TAM6 284 aa20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 BAP1Q92560 729 aa20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 REEP2Q9BRK0 252 aa20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 RGL1Q9NZL6 768 aa20.67■□□□□ 0.9
PDLIM4-201ENST00000253754 MACROD2A1Z1Q3 448 aa20.66■□□□□ 0.9
PDLIM4-201ENST00000253754 SRGAP2O75044 1071 aa20.66■□□□□ 0.9
PDLIM4-201ENST00000253754 APOBEC3FQ8IUX4 373 aaKnown RBP20.66■□□□□ 0.9
PDLIM4-201ENST00000253754 WDR18Q9BV38 432 aa20.66■□□□□ 0.9
PDLIM4-201ENST00000253754 DNM3Q9UQ16 869 aa20.66■□□□□ 0.9
PDLIM4-201ENST00000253754 IGLV3-22A0A075B6J6 115 aa20.66■□□□□ 0.9
PDLIM4-201ENST00000253754 RSPH10B2B2RC85 870 aa20.66■□□□□ 0.9
PDLIM4-201ENST00000253754 SASH3O75995 380 aa20.66■□□□□ 0.9
PDLIM4-201ENST00000253754 IPO7O95373 1038 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms