RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 ZCCHC17Q9NP64 241 aaKnown RBP24.22■■□□□ 1.47
RNF39-201ENST00000244360 ARHGAP20Q9P2F6 1191 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 TFR2Q9UP52 801 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 ZNF263O14978 683 aa24.21■■□□□ 1.47
RNF39-201ENST00000244360 RHOXF2BP0C7M4 288 aa24.21■■□□□ 1.47
RNF39-201ENST00000244360 CKAP4Q07065 602 aaKnown RBP24.21■■□□□ 1.47
RNF39-201ENST00000244360 MUM1L1Q5H9M0 696 aa24.21■■□□□ 1.47
RNF39-201ENST00000244360 PAPD7Q5XG87 772 aaKnown RBP24.21■■□□□ 1.47
RNF39-201ENST00000244360 PPP4R3CPQ6ZMV5 832 aa24.21■■□□□ 1.47
RNF39-201ENST00000244360 SPICE1Q8N0Z3 855 aa24.21■■□□□ 1.47
RNF39-201ENST00000244360 CCDC42Q96M95 316 aa24.21■■□□□ 1.47
RNF39-201ENST00000244360 CAMKK2Q96RR4 588 aa24.21■■□□□ 1.47
RNF39-201ENST00000244360 RHOXF2Q9BQY4 288 aa24.21■■□□□ 1.47
RNF39-201ENST00000244360 TBC1D7Q9P0N9 293 aa24.21■■□□□ 1.47
RNF39-201ENST00000244360 H3BQF6 201 aa24.2■■□□□ 1.47
RNF39-201ENST00000244360 HOXA13P31271 388 aaPredicted RBP24.2■■□□□ 1.47
RNF39-201ENST00000244360 VSNL1P62760 191 aa24.2■■□□□ 1.47
RNF39-201ENST00000244360 EDRF1Q3B7T1 1238 aa24.2■■□□□ 1.47
RNF39-201ENST00000244360 TRIM59Q8IWR1 403 aa24.2■■□□□ 1.47
RNF39-201ENST00000244360 RTKN2Q8IZC4 609 aa24.2■■□□□ 1.47
RNF39-201ENST00000244360 KCTD17Q8N5Z5 321 aa24.2■■□□□ 1.47
RNF39-201ENST00000244360 ACER1Q8TDN7 264 aa24.2■■□□□ 1.47
RNF39-201ENST00000244360 TSGA10Q9BZW7 698 aa24.2■■□□□ 1.47
RNF39-201ENST00000244360 EMILIN3Q9NT22 766 aa24.2■■□□□ 1.47
RNF39-201ENST00000244360 DNM3Q9UQ16 869 aa24.2■■□□□ 1.47
RNF39-201ENST00000244360 IGLV3-22A0A075B6J6 115 aa24.2■■□□□ 1.46
RNF39-201ENST00000244360 CACNB1Q02641 598 aaPredicted RBP24.2■■□□□ 1.46
RNF39-201ENST00000244360 KCNMA1Q12791 1236 aa24.2■■□□□ 1.46
RNF39-201ENST00000244360 GIT2Q14161 759 aa24.2■■□□□ 1.46
RNF39-201ENST00000244360 SPDYE2Q495Y8 402 aa24.2■■□□□ 1.46
RNF39-201ENST00000244360 CCDC40Q4G0X9 1142 aa24.2■■□□□ 1.46
RNF39-201ENST00000244360 POLR3CQ9BUI4 534 aaPredicted RBP24.2■■□□□ 1.46
RNF39-201ENST00000244360 GOPCQ9HD26 462 aa24.2■■□□□ 1.46
RNF39-201ENST00000244360 ADAM21Q9UKJ8 722 aa24.2■■□□□ 1.46
RNF39-201ENST00000244360 ZBTB21Q9ULJ3 1066 aa24.2■■□□□ 1.46
RNF39-201ENST00000244360 TFRCP02786 760 aaKnown RBP24.19■■□□□ 1.46
RNF39-201ENST00000244360 PSMC6P62333 389 aa24.19■■□□□ 1.46
RNF39-201ENST00000244360 DLGAP5Q15398 846 aa24.19■■□□□ 1.46
RNF39-201ENST00000244360 FKBP1CQ5VVH2 108 aa24.19■■□□□ 1.46
RNF39-201ENST00000244360 PDXDC1Q6P996 788 aa24.19■■□□□ 1.46
RNF39-201ENST00000244360 NEK11Q8NG66 645 aa24.19■■□□□ 1.46
RNF39-201ENST00000244360 HDAC9Q9UKV0 1011 aa24.19■■□□□ 1.46
RNF39-201ENST00000244360 SAR1BQ9Y6B6 198 aa24.19■■□□□ 1.46
RNF39-201ENST00000244360 COL4A5P29400 1685 aa24.19■■□□□ 1.46
RNF39-201ENST00000244360 CLRN2A0PK11 232 aa24.19■■□□□ 1.46
RNF39-201ENST00000244360 KRT18P05783 430 aaKnown RBP24.19■■□□□ 1.46
RNF39-201ENST00000244360 PLEKP08567 350 aaPredicted RBP24.19■■□□□ 1.46
RNF39-201ENST00000244360 SPA17Q15506 151 aa24.19■■□□□ 1.46
RNF39-201ENST00000244360 EZH2Q15910 746 aaKnown RBP24.19■■□□□ 1.46
RNF39-201ENST00000244360 NELFCDQ8IXH7 590 aa24.19■■□□□ 1.46
RNF39-201ENST00000244360 PDE11AQ9HCR9 933 aa24.19■■□□□ 1.46
RNF39-201ENST00000244360 KIF13BQ9NQT8 1826 aa24.18■■□□□ 1.46
RNF39-201ENST00000244360 ANO9A1A5B4 782 aa24.18■■□□□ 1.46
RNF39-201ENST00000244360 LRRC53A6NM62 1247 aa24.18■■□□□ 1.46
RNF39-201ENST00000244360 HNRNPH2P55795 449 aaKnown RBP24.18■■□□□ 1.46
RNF39-201ENST00000244360 CYP27A1Q02318 531 aa24.18■■□□□ 1.46
RNF39-201ENST00000244360 MAP9Q49MG5 647 aa24.18■■□□□ 1.46
RNF39-201ENST00000244360 EPM2AIP1Q7L775 607 aaPredicted RBP24.18■■□□□ 1.46
RNF39-201ENST00000244360 TTLL6Q8N841 843 aa24.18■■□□□ 1.46
RNF39-201ENST00000244360 RANBP17Q9H2T7 1088 aaKnown RBP24.18■■□□□ 1.46
RNF39-201ENST00000244360 PLA2G6O60733 806 aa24.18■■□□□ 1.46
RNF39-201ENST00000244360 KIF11P52732 1056 aa24.18■■□□□ 1.46
RNF39-201ENST00000244360 CASP8Q14790 479 aa24.18■■□□□ 1.46
RNF39-201ENST00000244360 FAM83BQ5T0W9 1011 aa24.18■■□□□ 1.46
RNF39-201ENST00000244360 TBC1D12O60347 775 aa24.17■■□□□ 1.46
RNF39-201ENST00000244360 ATP1A1P05023 1023 aaKnown RBP24.17■■□□□ 1.46
RNF39-201ENST00000244360 KIF5AQ12840 1032 aa24.17■■□□□ 1.46
RNF39-201ENST00000244360 PABPC4Q13310 644 aaKnown RBP eCLIP24.17■■□□□ 1.46
RNF39-201ENST00000244360 RRAGAQ7L523 313 aa24.17■■□□□ 1.46
RNF39-201ENST00000244360 NOA1Q8NC60 698 aaKnown RBP24.17■■□□□ 1.46
RNF39-201ENST00000244360 CYP2W1Q8TAV3 490 aa24.17■■□□□ 1.46
RNF39-201ENST00000244360 REEP2Q9BRK0 252 aa24.17■■□□□ 1.46
RNF39-201ENST00000244360 TANGO6Q9C0B7 1094 aa24.17■■□□□ 1.46
RNF39-201ENST00000244360 VIPAS39Q9H9C1 493 aa24.17■■□□□ 1.46
RNF39-201ENST00000244360 CEP72Q9P209 647 aa24.17■■□□□ 1.46
RNF39-201ENST00000244360 FAM184BQ9ULE4 1060 aa24.17■■□□□ 1.46
RNF39-201ENST00000244360 TARSL2A2RTX5 802 aaKnown RBP24.16■■□□□ 1.46
RNF39-201ENST00000244360 MEIS1O00470 390 aa24.16■■□□□ 1.46
RNF39-201ENST00000244360 RAD17O75943 681 aa24.16■■□□□ 1.46
RNF39-201ENST00000244360 EIF4A3P38919 411 aaKnown RBP24.16■■□□□ 1.46
RNF39-201ENST00000244360 USP14P54578 494 aa24.16■■□□□ 1.46
RNF39-201ENST00000244360 RAD51AP2Q09MP3 1159 aa24.16■■□□□ 1.46
RNF39-201ENST00000244360 MAPK8IP2Q13387 824 aaPredicted RBP24.16■■□□□ 1.46
RNF39-201ENST00000244360 CCDC155Q8N6L0 562 aa24.16■■□□□ 1.46
RNF39-201ENST00000244360 FAM71BQ8TC56 605 aa24.16■■□□□ 1.46
RNF39-201ENST00000244360 SMCR8Q8TEV9 937 aaPredicted RBP24.16■■□□□ 1.46
RNF39-201ENST00000244360 SYN2Q92777 582 aaPredicted RBP24.16■■□□□ 1.46
RNF39-201ENST00000244360 NUCKS1Q9H1E3 243 aaKnown RBP24.16■■□□□ 1.46
RNF39-201ENST00000244360 MED4Q9NPJ6 270 aa24.16■■□□□ 1.46
RNF39-201ENST00000244360 TRAF3IP3Q9Y228 551 aa24.16■■□□□ 1.46
RNF39-201ENST00000244360 ATAD5Q96QE3 1844 aa24.16■■□□□ 1.46
RNF39-201ENST00000244360 NOL4O94818 638 aa24.16■■□□□ 1.46
RNF39-201ENST00000244360 ASTE1Q2TB18 679 aaPredicted RBP24.16■■□□□ 1.46
RNF39-201ENST00000244360 HSP90B2PQ58FF3 399 aa24.16■■□□□ 1.46
RNF39-201ENST00000244360 KRT26Q7Z3Y9 468 aa24.16■■□□□ 1.46
RNF39-201ENST00000244360 MTMR14Q8NCE2 650 aa24.16■■□□□ 1.46
RNF39-201ENST00000244360 PCDHA13Q9Y5I0 950 aa24.16■■□□□ 1.46
RNF39-201ENST00000244360 SSU72P8A0A1W2PR75 194 aa24.15■■□□□ 1.46
RNF39-201ENST00000244360 ZNF76P36508 570 aa24.15■■□□□ 1.46
RNF39-201ENST00000244360 CASP5P51878 434 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms