RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 CCDC62Q6P9F0 684 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 TRAF7Q6Q0C0 670 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 C7orf31Q8N865 590 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 RGS22Q8NE09 1264 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 OTUD7AQ8TE49 926 aaPredicted RBP9.74□□□□□ -0.85
IFT43-201ENST00000238628 SEPT8Q92599 483 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 TBC1D5Q92609 795 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 KAT2BQ92831 832 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 TTC14Q96N46 770 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 TAAR1Q96RJ0 339 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 SMOC2Q9H3U7 446 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 HDAC6Q9UBN7 1215 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 GTF2IRD1Q9UHL9 959 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 CDV3Q9UKY7 258 aaKnown RBP9.74□□□□□ -0.85
IFT43-201ENST00000238628 PLAGL2Q9UPG8 496 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 WDR19Q8NEZ3 1342 aa9.74□□□□□ -0.85
IFT43-201ENST00000238628 RSPH10B2B2RC85 870 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 RSPH10BP0C881 870 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 GOLGA8HP0CJ92 632 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 AOC1P19801 751 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 MX1P20591 662 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 PSEN2P49810 448 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 ARHGAP1Q07960 439 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 DGKDQ16760 1214 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 PLEKHG4Q58EX7 1191 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 CWF19L1Q69YN2 538 aaKnown RBP9.73□□□□□ -0.85
IFT43-201ENST00000238628 ZC3H14Q6PJT7 736 aaKnown RBP9.73□□□□□ -0.85
IFT43-201ENST00000238628 NSUN6Q8TEA1 469 aaKnown RBP9.73□□□□□ -0.85
IFT43-201ENST00000238628 IWS1Q96ST2 819 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 KATNAL1Q9BW62 490 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 PLVAPQ9BX97 442 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 UBA5Q9GZZ9 404 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 MAF1Q9H063 256 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 TLE6Q9H808 572 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 HELLSQ9NRZ9 838 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 DDX41Q9UJV9 622 aaKnown RBP9.73□□□□□ -0.85
IFT43-201ENST00000238628 NR2E1Q9Y466 385 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 WDR87Q6ZQQ6 2873 aa9.73□□□□□ -0.85
IFT43-201ENST00000238628 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.72□□□□□ -0.85
IFT43-201ENST00000238628 LINC00271P0C7V0 271 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 SNHG28P0DPA3 235 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 DNAJB1P25685 340 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 THPOP40225 353 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 LAMC2Q13753 1193 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 MFSD10Q14728 455 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 KIAA0753Q2KHM9 967 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 TRIM71Q2Q1W2 868 aaKnown RBP9.72□□□□□ -0.85
IFT43-201ENST00000238628 MCMDC2Q4G0Z9 681 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 GPATCH4Q5T3I0 446 aaKnown RBP9.72□□□□□ -0.85
IFT43-201ENST00000238628 MFSD6Q6ZSS7 791 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 MCF2L2Q86YR7 1114 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 SYTL5Q8TDW5 730 aaPredicted RBP9.72□□□□□ -0.85
IFT43-201ENST00000238628 MICAL1Q8TDZ2 1067 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 CLP1Q92989 425 aaKnown RBP9.72□□□□□ -0.85
IFT43-201ENST00000238628 WNT8BQ93098 351 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 EVI5LQ96CN4 794 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 NEK1Q96PY6 1258 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 RTP3Q9BQQ7 232 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 RTKNQ9BST9 563 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 CPVLQ9H3G5 476 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 ABCB11O95342 1321 aa9.72□□□□□ -0.85
IFT43-201ENST00000238628 PER2O15055 1255 aa9.71□□□□□ -0.86
IFT43-201ENST00000238628 EIF3JO75822 258 aaKnown RBP9.71□□□□□ -0.86
IFT43-201ENST00000238628 ARP10275 920 aa9.71□□□□□ -0.86
IFT43-201ENST00000238628 HSPD1P10809 573 aaKnown RBP9.71□□□□□ -0.86
IFT43-201ENST00000238628 HAND2P61296 217 aa9.71□□□□□ -0.86
IFT43-201ENST00000238628 RBM10P98175 930 aaKnown RBP9.71□□□□□ -0.86
IFT43-201ENST00000238628 ZNF200P98182 395 aaPredicted RBP9.71□□□□□ -0.86
IFT43-201ENST00000238628 BTG3Q14201 252 aaPredicted RBP9.71□□□□□ -0.86
IFT43-201ENST00000238628 CDC37Q16543 378 aaPredicted RBP9.71□□□□□ -0.86
IFT43-201ENST00000238628 ARHGEF16Q5VV41 709 aa9.71□□□□□ -0.86
IFT43-201ENST00000238628 DHX37Q8IY37 1157 aaKnown RBP9.71□□□□□ -0.86
IFT43-201ENST00000238628 SPPL3Q8TCT6 385 aa9.71□□□□□ -0.86
IFT43-201ENST00000238628 RIN2Q8WYP3 895 aaPredicted RBP9.71□□□□□ -0.86
IFT43-201ENST00000238628 P2RX5Q93086 422 aa9.71□□□□□ -0.86
IFT43-201ENST00000238628 RMDN3Q96TC7 470 aa9.71□□□□□ -0.86
IFT43-201ENST00000238628 ZKSCAN3Q9BRR0 538 aa9.71□□□□□ -0.86
IFT43-201ENST00000238628 APOL5Q9BWW9 433 aa9.71□□□□□ -0.86
IFT43-201ENST00000238628 COL20A1Q9P218 1284 aa9.71□□□□□ -0.86
IFT43-201ENST00000238628 ZBTB47Q9UFB7 747 aaPredicted RBP9.71□□□□□ -0.86
IFT43-201ENST00000238628 MRVI1Q9Y6F6 885 aa9.71□□□□□ -0.86
IFT43-201ENST00000238628 ADGRA3Q8IWK6 1321 aa9.71□□□□□ -0.86
IFT43-201ENST00000238628 PRR5-ARHGAP8B1AHC4 643 aa9.7□□□□□ -0.86
IFT43-201ENST00000238628 HAS3O00219 553 aa9.7□□□□□ -0.86
IFT43-201ENST00000238628 STK25O00506 426 aa9.7□□□□□ -0.86
IFT43-201ENST00000238628 PPFIA4O75335 1185 aa9.7□□□□□ -0.86
IFT43-201ENST00000238628 ITGB1P05556 798 aa9.7□□□□□ -0.86
IFT43-201ENST00000238628 ASGR2P07307 311 aa9.7□□□□□ -0.86
IFT43-201ENST00000238628 NR3C2P08235 984 aa9.7□□□□□ -0.86
IFT43-201ENST00000238628 ZNF286BP0CG31 522 aa9.7□□□□□ -0.86
IFT43-201ENST00000238628 SRGAP2BP0DMP2 458 aa9.7□□□□□ -0.86
IFT43-201ENST00000238628 PCP11498 1178 aaKnown RBP9.7□□□□□ -0.86
IFT43-201ENST00000238628 EIF2AK2P19525 551 aaKnown RBP9.7□□□□□ -0.86
IFT43-201ENST00000238628 ARHGAP8P85298 464 aa9.7□□□□□ -0.86
IFT43-201ENST00000238628 DGKHQ86XP1 1220 aa9.7□□□□□ -0.86
IFT43-201ENST00000238628 ADGRF4Q8IZF3 695 aa9.7□□□□□ -0.86
IFT43-201ENST00000238628 GPR161Q8N6U8 529 aaKnown RBP9.7□□□□□ -0.86
IFT43-201ENST00000238628 POF1BQ8WVV4 589 aa9.7□□□□□ -0.86
IFT43-201ENST00000238628 EMID1Q96A84 441 aaPredicted RBP9.7□□□□□ -0.86
IFT43-201ENST00000238628 FAM227BQ96M60 508 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms