RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CCSER1Q9C0I3 900 aa15.46■□□□□ 0.06
SF1-201ENST00000227503 SLC39A2Q9NP94 309 aa15.46■□□□□ 0.06
SF1-201ENST00000227503 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.46■□□□□ 0.06
SF1-201ENST00000227503 NFS1Q9Y697 457 aa15.46■□□□□ 0.06
SF1-201ENST00000227503 MYH4Q9Y623 1939 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 USP17L3A6NCW0 530 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 USP17L4A6NCW7 530 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 RGL2O15211 777 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 RHOBTB3O94955 611 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 KLRC1P26715 233 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 PPP2R2AP63151 447 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 INF2Q27J81 1249 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 GKAP1Q5VSY0 366 aaPredicted RBP15.45■□□□□ 0.06
SF1-201ENST00000227503 USP17L1Q7RTZ2 530 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 GIMAP8Q8ND71 665 aaPredicted RBP15.45■□□□□ 0.06
SF1-201ENST00000227503 TATDN2Q93075 761 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 P2RX5Q93086 422 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 FAM167BQ9BTA0 163 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 PANK4Q9NVE7 773 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 STXBP3O00186 592 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 SLC8A1P32418 973 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 DZIP1Q86YF9 867 aaKnown RBP15.45■□□□□ 0.06
SF1-201ENST00000227503 DDX47Q9H0S4 455 aaKnown RBP15.45■□□□□ 0.06
SF1-201ENST00000227503 MTMR7Q9Y216 660 aa15.45■□□□□ 0.06
SF1-201ENST00000227503 MYL1P05976 194 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 HSPA9P38646 679 aaKnown RBP15.44■□□□□ 0.06
SF1-201ENST00000227503 NT5C2P49902 561 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 GNAQP50148 359 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 GRIK3Q13003 919 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 SNX1Q13596 522 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 KRT71Q3SY84 523 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 BZW1Q7L1Q6 419 aaKnown RBP15.44■□□□□ 0.06
SF1-201ENST00000227503 MREGQ8N565 214 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 AGAP11Q8TF27 550 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 YIPF3Q9GZM5 350 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 BARHL2Q9NY43 387 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 ROBO3Q96MS0 1386 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 ZNF831Q5JPB2 1677 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 DIAPH2O60879 1101 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 DRD4P21917 467 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 TM4SF1P30408 202 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 UBA7P41226 1012 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 EMC10Q5UCC4 262 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 GALNT17Q6IS24 598 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 SPICE1Q8N0Z3 855 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 CCDC24Q8N4L8 307 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 SH3RF3Q8TEJ3 882 aaPredicted RBP15.44■□□□□ 0.06
SF1-201ENST00000227503 RUBCNQ92622 972 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 ZNF570Q96NI8 536 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 NYXQ9GZU5 481 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 TCP11L1Q9NUJ3 509 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 CCDC88AQ3V6T2 1871 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 GOLGB1Q14789 3259 aaKnown RBP15.44■□□□□ 0.06
SF1-201ENST00000227503 CNTNAP4Q9C0A0 1308 aa15.44■□□□□ 0.06
SF1-201ENST00000227503 KCNK3O14649 394 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 IRF6O14896 467 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 KCNJ2P63252 427 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 ASIC1P78348 528 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 SPTY2D1Q68D10 685 aaPredicted RBP15.43■□□□□ 0.06
SF1-201ENST00000227503 BARGINQ6ZT62 677 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 HEATR3Q7Z4Q2 680 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 ARFGAP2Q8N6H7 521 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 WHAMMQ8TF30 809 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.43■□□□□ 0.066e-6■■□□□ 11.9
SF1-201ENST00000227503 DPH5Q9H2P9 285 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 TAF1DQ9H5J8 278 aaPredicted RBP15.43■□□□□ 0.06
SF1-201ENST00000227503 PLCB1Q9NQ66 1216 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 SRP68Q9UHB9 627 aaKnown RBP15.43■□□□□ 0.06
SF1-201ENST00000227503 PNMA2Q9UL42 364 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 AGAP1Q9UPQ3 857 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 PALM3A6NDB9 673 aaPredicted RBP15.43■□□□□ 0.06
SF1-201ENST00000227503 CTNND1O60716 968 aaKnown RBP15.43■□□□□ 0.06
SF1-201ENST00000227503 PRPHP41219 470 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 SEMA3FQ13275 785 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 C11orf91Q3C1V1 193 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 THEMIS2Q5TEJ8 643 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 CCDC50Q8IVM0 306 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 CCDC63Q8NA47 563 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 SIK3Q9Y2K2 1263 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 FLT1P17948 1338 aa15.43■□□□□ 0.06
SF1-201ENST00000227503 LAD1O00515 517 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 DAPK3O43293 454 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 TRIM37O94972 964 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 NBPF9Q3BBW0 867 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 CACNA2D4Q7Z3S7 1137 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 NBPF5PQ86XG9 351 aaPredicted RBP15.42■□□□□ 0.06
SF1-201ENST00000227503 KIF2BQ8N4N8 673 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 RETREG2Q8NC44 543 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 UHMK1Q8TAS1 419 aaKnown RBP15.42■□□□□ 0.06
SF1-201ENST00000227503 CALR3Q96L12 384 aaKnown RBP15.42■□□□□ 0.06
SF1-201ENST00000227503 INPP4AQ96PE3 977 aaPredicted RBP15.42■□□□□ 0.06
SF1-201ENST00000227503 SETDB2Q96T68 719 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 CELF4Q9BZC1 486 aaKnown RBP15.42■□□□□ 0.06
SF1-201ENST00000227503 TANGO6Q9C0B7 1094 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 SEMA6BQ9H3T3 888 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 MKNK2Q9HBH9 465 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 NARFQ9UHQ1 456 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 GGA2Q9UJY4 613 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 TRPC6Q9Y210 931 aa15.42■□□□□ 0.06
SF1-201ENST00000227503 PPIP5K2O43314 1243 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms